ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet76a12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506723.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.28 mRNA Length = 1642 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 1456 ttactgaccaccacggaggcggagcaccaggtggagggt 1418 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||||||||| Sbjct: 309 ccaccacggaggcggaggacaaggtgaagggt 278 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||||||| ||||| Sbjct: 1222 accaccacggagacgaagcaccaggtggagggt 1190 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| ||||| ||||| Sbjct: 994 accaccacgaaggcggagcacaaggtggagggt 962 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 537 ccaccacggaggcggaggacaaggtggagggt 506
>ref|XM_464194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1640 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 1453 ttactgaccaccacggaggcggagcaccaggtggagggt 1415 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||||||||| Sbjct: 306 ccaccacggaggcggaggacaaggtgaagggt 275 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||||||| ||||| Sbjct: 1219 accaccacggagacgaagcaccaggtggagggt 1187 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| ||||| ||||| Sbjct: 991 accaccacgaaggcggagcacaaggtggagggt 959 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 534 ccaccacggaggcggaggacaaggtggagggt 503
>gb|BT016652.1| Zea mays clone Contig485 mRNA sequence Length = 1253 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 1001 ttactgaccaccacggaggcggagcaccaggtggagggt 963 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 gaggcggagcaccaggtgaagggt 207 |||||||||||||||||| ||||| Sbjct: 530 gaggcggagcaccaggtggagggt 507
>gb|AY072820.1| Oryza sativa ubiquitin mRNA, partial cds Length = 394 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 195 ttactgaccaccacggaggcggagcaccaggtggagggt 157
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 3340642 ttactgaccaccacggaggcggagcaccaggtggagggt 3340680 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Plus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||||||||| Sbjct: 3341789 ccaccacggaggcggaggacaaggtgaagggt 3341820 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| ||||| ||||| Sbjct: 3341104 accaccacgaaggcggagcacaaggtggagggt 3341136 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||||||| ||||| Sbjct: 3340876 accaccacggagacgaagcaccaggtggagggt 3340908 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 3341561 ccaccacggaggcggaggacaaggtggagggt 3341592
>gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 4159 ttactgaccaccacggaggcggagcaccaggtggagggt 4121 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||||||||| Sbjct: 3012 ccaccacggaggcggaggacaaggtgaagggt 2981 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||||||| ||||| Sbjct: 3925 accaccacggagacgaagcaccaggtggagggt 3893 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| ||||| ||||| Sbjct: 3697 accaccacgaaggcggagcacaaggtggagggt 3665 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 3240 ccaccacggaggcggaggacaaggtggagggt 3209
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 89502 ttactgaccaccacggaggcggagcaccaggtggagggt 89540 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Plus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||||||||| Sbjct: 90649 ccaccacggaggcggaggacaaggtgaagggt 90680 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| ||||| ||||| Sbjct: 89964 accaccacgaaggcggagcacaaggtggagggt 89996 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||||||| ||||| Sbjct: 89736 accaccacggagacgaagcaccaggtggagggt 89768 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 90421 ccaccacggaggcggaggacaaggtggagggt 90452
>gb|AF216530.1|AF216530 Oryza sativa ubiquitin RiP-20 mRNA, partial cds Length = 456 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 220 ttactgaccaccacggaggcggagcaccaggtggagggt 182
>dbj|AK101547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M20, full insert sequence Length = 1642 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 1456 ttactgaccaccacggaggcggagcaccaggtggagggt 1418 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||||||||| Sbjct: 309 ccaccacggaggcggaggacaaggtgaagggt 278 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||||||| ||||| Sbjct: 1222 accaccacggagacgaagcaccaggtggagggt 1190 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| ||||| ||||| Sbjct: 994 accaccacgaaggcggagcacaaggtggagggt 962 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 537 ccaccacggaggcggaggacaaggtggagggt 506
>dbj|AK061956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F08, full insert sequence Length = 1640 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 1453 ttactgaccaccacggaggcggagcaccaggtggagggt 1415 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||||||||| Sbjct: 306 ccaccacggaggcggaggacaaggtgaagggt 275 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||||||| ||||| Sbjct: 1219 accaccacggagacgaagcaccaggtggagggt 1187 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| ||||| ||||| Sbjct: 991 accaccacgaaggcggagcacaaggtggagggt 959 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 534 ccaccacggaggcggaggacaaggtggagggt 503
>gb|BT016494.1| Zea mays clone Contig327 mRNA sequence Length = 974 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||| |||||||||||||| ||||| Sbjct: 757 ttactgaccaccacggagacggagcaccaggtggagggt 719
>emb|X69422.1|AFTETUBI A.fatua mRNA for tetraubiquitin Length = 1196 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||| ||||||||||| |||||||||||||||||||| Sbjct: 950 ttactggccaccacggagacggagcaccaggtgaagggt 912 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||||||||| ||||| Sbjct: 715 ccaccacggaggcggagcaccaggtggagggt 684 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| |||||||||||||||||||| ||||| Sbjct: 259 ccaccgcggaggcggagcaccaggtggagggt 228 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| |||||||||||||||| ||| ||||| Sbjct: 487 ccaccgcggaggcggagcaccaagtggagggt 456
>gb|BT016665.1| Zea mays clone Contig498 mRNA sequence Length = 1012 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||||||||| |||||||||||||||||||| Sbjct: 768 ttactgaccaccgcggaggcggagcaccaggtg 736
>gb|BT016436.1| Zea mays clone Contig269 mRNA sequence Length = 990 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||||||||| |||||||||||||||||||| Sbjct: 727 ttactgaccaccgcggaggcggagcaccaggtg 695
>gb|S94466.1| polyubiquitin [maize, Genomic, 3439 nt] Length = 3439 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||||||||| |||||||||||||||||||| Sbjct: 3251 ttactgaccaccgcggaggcggagcaccaggtg 3219
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||| |||||||||||||||||||||||||| Sbjct: 28020533 ttactggccaccacggaggcggagcaccaggtg 28020501 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cacggaggcggagcaccaggtg 201 |||||||||||||||||||||| Sbjct: 27575224 cacggaggcggagcaccaggtg 27575245
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||| |||||||||||||||||||||||||| Sbjct: 65352 ttactggccaccacggaggcggagcaccaggtg 65320
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||| |||||||||||||||||||||||||| Sbjct: 1673 ttactggccaccacggaggcggagcaccaggtg 1641
>gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||||||||||||||| Sbjct: 4372 accaccacgaaggcggagcaccaggtgaagggt 4340 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||| ||||||||||| |||||||||||||| Sbjct: 4834 ttactggccaccacggagacggagcaccaggtg 4802 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||| || ||||||||||||||||||||||| Sbjct: 4600 accaccgcgaaggcggagcaccaggtgaagggt 4568
>gb|U29158.1|ZMU29158 Zea mays polyubiquitin (MubC5) mRNA, complete cds Length = 1381 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||||||||| |||||||||||||||||||| Sbjct: 1172 ttactgaccaccgcggaggcggagcaccaggtg 1140
>emb|X04133.1|HVUBIQR Barley mRNA for ubiquitin polyprecursor fragment Length = 703 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||| ||||||||||||||||||||||| Sbjct: 53 ccaccacgaaggcggagcaccaggtgaagggt 22 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||| ||||| ||||||||||||||||| Sbjct: 509 ccaccacgcaggcgaagcaccaggtgaagggt 478
>emb|AJ271129.1|PAB271129 Picea abies mRNA for putative polyubiquitin, (pPA0031 gene) Length = 1020 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| |||||||||||||||||||| Sbjct: 755 ccaccacggagacggagcaccaggtgaagggt 724
>dbj|AB070528.1| Physarum polycephalum ub4 mRNA for ubiquitin 4, complete cds Length = 1266 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||||| ||||||||| Sbjct: 877 ccaccacggaggcggagcaccaagtgaagggt 846 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||||| ||| ||||| Sbjct: 1105 ccaccacggaggcggagcaccaagtggagggt 1074 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||| ||||||||||||||||| ||||| Sbjct: 193 ccaccacgaaggcggagcaccaggtggagggt 162 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||| ||||||||||||| ||| ||||| Sbjct: 649 ccaccacgaaggcggagcaccaagtggagggt 618 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||| ||||||||||||| ||| ||||| Sbjct: 421 ccaccacgaaggcggagcaccaagtggagggt 390
>gb|AY726637.1| Picea sitchensis polyubiquitin gene, partial sequence Length = 309 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| |||||||||||||||||||| Sbjct: 149 ccaccacggagacggagcaccaggtgaagggt 118
>dbj|AB045758.1| Physarum polycephalum ppub4 mRNA for polyubiquitin, complete cds Length = 1266 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||||| ||||||||| Sbjct: 877 ccaccacggaggcggagcaccaagtgaagggt 846 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||||| ||| ||||| Sbjct: 1105 ccaccacggaggcggagcaccaagtggagggt 1074 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||| ||||||||||||||||| ||||| Sbjct: 193 ccaccacgaaggcggagcaccaggtggagggt 162 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||| ||||||||||||| ||| ||||| Sbjct: 649 ccaccacgaaggcggagcaccaagtggagggt 618 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||| ||||||||||||| ||| ||||| Sbjct: 421 ccaccacgaaggcggagcaccaagtggagggt 390
>gb|BT016596.1| Zea mays clone Contig429 mRNA sequence Length = 980 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||| |||||||| ||||| ||||| Sbjct: 756 ttactgaccaccacggagacggagcacaaggtggagggt 718 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||| | |||||||||||||||||| ||||| Sbjct: 522 accacccctgaggcggagcaccaggtggagggt 490
>gb|BT016403.1| Zea mays clone Contig236 mRNA sequence Length = 1019 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| |||||||||||||||| ||| ||||| Sbjct: 851 ttactgaccaccgcggaggcggagcaccaagtggagggt 813
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||| |||||||| ||||| ||||| Sbjct: 1253 ttactgaccaccacggagacggagcacaaggtggagggt 1215 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 gaggcggagcaccaggtgaagggt 207 |||||||||||||||||| ||||| Sbjct: 782 gaggcggagcaccaggtggagggt 759
>emb|X56803.1|TAMRNAU T.aestivum L. mRNA for ubiquitin Length = 436 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||| ||||||||||| |||||||||| ||||||||| Sbjct: 236 ttactggccaccacggagacggagcaccaagtgaagggt 198
>emb|X56601.1|TAUBIQU Wheat mRNA for ubiquitin Length = 436 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||| ||||||||||| |||||||||| ||||||||| Sbjct: 236 ttactggccaccacggagacggagcaccaagtgaagggt 198
>gb|DQ086482.1| Triticum aestivum ubiquitin (Ubiq) mRNA, partial cds Length = 400 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||| ||||||||||| |||||||||| ||||||||| Sbjct: 217 ttactggccaccacggagacggagcaccaagtgaagggt 179
>gb|S94464.1| polyubiquitin [maize, Genomic, 3841 nt] Length = 3841 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||| |||||||| ||||| ||||| Sbjct: 3595 ttactgaccaccacggagacggagcacaaggtggagggt 3557
>gb|AY297059.1| Triticum aestivum ubiquitin (WUB1) mRNA, complete cds Length = 450 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||| ||||||||||| |||||||||| ||||||||| Sbjct: 234 ttactggccaccacggagacggagcaccaagtgaagggt 196
>gb|AF502575.1| Musa acuminata ubiquitin (UBQ1) gene, complete cds Length = 1146 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 173 tgaccaccacggaggcggagcaccaggtgaagggt 207 ||||| || |||||||||||||||||||||||||| Sbjct: 1142 tgacccccgcggaggcggagcaccaggtgaagggt 1108 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 683 ccaccacggaggcggaggacaaggtggagggt 652
>gb|U29159.1|ZMU29159 Zea mays clone MubG1 ubiquitin gene, complete cds Length = 4190 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||| |||||||| ||||| ||||| Sbjct: 3944 ttactgaccaccacggagacggagcacaaggtggagggt 3906
>gb|L41658.1|SCFPOLY Saccharum hybrid (clone SCUBI561) polyubiquitin mRNA, complete cds Length = 1187 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||| || |||||||||||||| ||||| Sbjct: 988 ttactgaccaccacgaagacggagcaccaggtggagggt 950
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| | |||||||||||||||||| ||||| Sbjct: 17590 ttactgaccacccctgaggcggagcaccaggtggagggt 17552
>emb|Y12082.1|SDPOLUBQ2 Suberites domuncula mRNA for polyubiquitin precursor, partial Length = 670 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| |||||||||| ||||||||| Sbjct: 210 accaccacggagacggagcaccaagtgaagggt 178 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| |||||||||| ||||||||| Sbjct: 437 ccaccacggagacggagcaccaagtgaagggt 406
>emb|AJ844615.1| Plantago major ubq1 gene for polyubiquitin Length = 1189 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| |||||||||| ||||||||| Sbjct: 288 accaccacggagacggagcaccaagtgaagggt 256
>dbj|AB226314.1| Aspergillus oryzae cDNA, contig sequence: AoEST3176 Length = 955 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| ||||||||||| Sbjct: 517 accaccacgcaggcggagcacgaggtgaagggt 485
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| ||||||||||| Sbjct: 1835103 accaccacgcaggcggagcacgaggtgaagggt 1835071
>gb|L81142.1| Pisum sativum (Alaska) ubuquitin (PUB4) gene, complete cds Length = 2750 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| ||||||||||| |||||||| Sbjct: 1574 accaccacggagacggagcaccagatgaagggt 1542
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaag 204 ||||| ||||||||||||||||||||||| Sbjct: 16920268 ccaccgcggaggcggagcaccaggtgaag 16920240 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtg 201 |||||||||||||||||||| Sbjct: 18501618 cggaggcggagcaccaggtg 18501599 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtg 201 |||||||||||||||||||| Sbjct: 18495911 cggaggcggagcaccaggtg 18495892
>gb|AY099143.1| Cercomonas ATCC50316 isolate pub5 polyubiquitin gene, partial cds Length = 532 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||| |||||||||||||| ||||||||||| Sbjct: 442 accaccgcggaggcggagcacgaggtgaagggt 410
>gb|AY099142.1| Cercomonas ATCC50316 isolate pub4 polyubiquitin gene, partial cds Length = 766 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||| |||||||||||||| ||||||||||| Sbjct: 442 accaccgcggaggcggagcacgaggtgaagggt 410
>gb|AY099139.1| Cercomonas ATCC50316 isolate pub1 polyubiquitin gene, partial cds Length = 532 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||| |||||||||||||| ||||||||||| Sbjct: 442 accaccgcggaggcggagcacgaggtgaagggt 410
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaag 204 ||||| ||||||||||||||||||||||| Sbjct: 50081 ccaccgcggaggcggagcaccaggtgaag 50053
>gb|AF093504.1|AF093504 Saccharum hybrid cultivar H32-8560 tetra-ubiquitin (ubi4) gene, complete cds Length = 5551 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||| ||||||||||| |||||||||||||| Sbjct: 2720 ttactggccaccacggagacggagcaccaggtg 2688 Score = 44.1 bits (22), Expect = 0.17 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||| || | ||||||||||||||||||||| Sbjct: 2486 accaccgcgnaagcggagcaccaggtgaagggt 2454
>gb|U37687.1|OSU37687 Oryza sativa polyubiquitin (Rubq1) mRNA, complete cds Length = 1679 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||| ||||||||||||||||| |||||||| Sbjct: 1427 ttactggccaccacggaggcggaggaccaggtg 1395
>gb|M60176.1|BLYMUB2 Barley ubiquitin (mub2) gene, complete cds Length = 1730 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||||||||| ||||| Sbjct: 977 accaccacgaaggcggagcaccaggtggagggt 945
>gb|BT016552.1| Zea mays clone Contig385 mRNA sequence Length = 700 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| |||||||||||||||||||| ||||| Sbjct: 295 ccaccgcggaggcggagcaccaggtggagggt 264
>gb|BT018204.1| Zea mays clone EL01N0560A10.c mRNA sequence Length = 546 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| |||||||||||||||||||| ||||| Sbjct: 143 ccaccgcggaggcggagcaccaggtggagggt 112
>gb|BT017442.1| Zea mays clone EL01N0405B08.c mRNA sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| |||||||||||||||||||| ||||| Sbjct: 317 ccacctcggaggcggagcaccaggtggagggt 286
>gb|AY251799.1| Lotharella globosa ubiquitin/actin fusion protein 1 gene, partial cds Length = 712 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||||||||| Sbjct: 207 ccaccacggaggcggaggacaaggtgaagggt 176
>emb|Y17003.1|SDO17003 Suberites domuncula mRNA for polyubiquitin Length = 1145 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| |||||||||| ||||||||| Sbjct: 1015 ccaccacggagacggagcaccaagtgaagggt 984 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||| ||||||||| Sbjct: 788 accaccacggagacgaagcaccaagtgaagggt 756 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||| ||||||||| Sbjct: 560 accaccacggagacgaagcaccaagtgaagggt 528 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| || ||||||| ||||||||| Sbjct: 331 ccaccacggagacgaagcaccaagtgaagggt 300
>emb|Y12081.1|SDPOLUBQ1 Suberites domuncula mRNA for polyubiquitin precursor Length = 1392 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| |||||||||| ||||||||| Sbjct: 1243 ccaccacggagacggagcaccaagtgaagggt 1212 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||| ||||||||| Sbjct: 1016 accaccacggagacgaagcaccaagtgaagggt 984 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||| ||||||||| Sbjct: 788 accaccacggagacgaagcaccaagtgaagggt 756 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || ||||||| ||||||||| Sbjct: 560 accaccacggagacgaagcaccaagtgaagggt 528 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| || ||||||| ||||||||| Sbjct: 331 ccaccacggagacgaagcaccaagtgaagggt 300
>gb|L81141.1| Pisum sativum (Alaska) ubiquitin (PUB3) gene, complete cds Length = 2544 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| |||||||||||||||||||| ||||| Sbjct: 1250 ccaccccggaggcggagcaccaggtggagggt 1219
>dbj|AB070527.1| Physarum polycephalum ub3 mRNA for ubiquitin 3, complete cds Length = 1193 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||||| ||| ||||| Sbjct: 637 ccaccacggaggcggagcaccaagtggagggt 606 Score = 42.1 bits (21), Expect = 0.66 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 ccacggaggcggagcaccaggtgaagggt 207 ||||| ||||||||||| ||||||||||| Sbjct: 406 ccacgaaggcggagcacaaggtgaagggt 378 Score = 42.1 bits (21), Expect = 0.66 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 ccacggaggcggagcaccaggtgaagggt 207 ||||| ||||||||||| ||||||||||| Sbjct: 178 ccacgaaggcggagcacaaggtgaagggt 150
>dbj|AB070526.1| Physarum polycephalum ub2 mRNA for ubiquitin 2, complete cds Length = 985 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||||| ||| ||||| Sbjct: 883 ccaccacggaggcggagcaccaagtggagggt 852
>gb|AY099133.1| Cercomonas edax isolate pub5 polyubiquitin gene, partial cds Length = 532 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||| ||||| ||||||||||| Sbjct: 207 ccaccacggaggcgcagcacaaggtgaagggt 176
>gb|AY099132.1| Cercomonas edax isolate pub4 polyubiquitin gene, partial cds Length = 495 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||| ||||| ||||||||||| Sbjct: 404 ccaccacggaggcgcagcacaaggtgaagggt 373
>gb|AY099131.1| Cercomonas edax isolate pub3 polyubiquitin gene, partial cds Length = 448 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||| ||||| ||||||||||| Sbjct: 357 ccaccacggaggcgcagcacaaggtgaagggt 326
>dbj|AK067024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J24, full insert sequence Length = 1189 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||||||||| Sbjct: 309 ccaccacggaggcggaggacaaggtgaagggt 278 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 537 ccaccacggaggcggaggacaaggtggagggt 506
>gb|U77939.1|PVU77939 Phaseolus vulgaris ubiquitin-like protein mRNA, complete cds Length = 1399 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| ||||| |||||||||||||| Sbjct: 582 ccaccacggagacggagaaccaggtgaagggt 551 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| ||||| || ||||||||||| Sbjct: 354 ccaccacggagacggagaactaggtgaagggt 323
>gb|U29161.1|ZMU29161 Zea mays clone MubG7 ubiquitin fusion protein gene, complete cds Length = 2985 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| |||||||||||||||||||| ||||| Sbjct: 2155 ccacctcggaggcggagcaccaggtggagggt 2124
>gb|M68937.1|MZEUBFA Zea mays ubiquitin fusion protein (UBF9) gene, complete cds Length = 1624 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| |||||||||||||||||||| ||||| Sbjct: 1133 ccacctcggaggcggagcaccaggtggagggt 1102
>dbj|AB045757.1| Physarum polycephalum ppub3 mRNA for polyubiquitin, complete cds Length = 1193 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||||| ||| ||||| Sbjct: 637 ccaccacggaggcggagcaccaagtggagggt 606 Score = 42.1 bits (21), Expect = 0.66 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 ccacggaggcggagcaccaggtgaagggt 207 ||||| ||||||||||| ||||||||||| Sbjct: 406 ccacgaaggcggagcacaaggtgaagggt 378 Score = 42.1 bits (21), Expect = 0.66 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 ccacggaggcggagcaccaggtgaagggt 207 ||||| ||||||||||| ||||||||||| Sbjct: 178 ccacgaaggcggagcacaaggtgaagggt 150
>dbj|AB045756.1| Physarum polycephalum ppub2 mRNA for polyubiquitin, complete cds Length = 985 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||||| ||| ||||| Sbjct: 883 ccaccacggaggcggagcaccaagtggagggt 852
>gb|DQ098274.1| Sainouron mikroteron polyubiquitin (pub) gene, partial cds Length = 189 Score = 46.1 bits (23), Expect = 0.042 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtg 201 ||||||||||||||||||||| ||||| Sbjct: 87 accaccacggaggcggagcacgaggtg 61
>gb|BT018032.1| Zea mays clone EL01N0530D02.c mRNA sequence Length = 1238 Score = 46.1 bits (23), Expect = 0.042 Identities = 26/27 (96%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcac 195 |||||||||||||||||| |||||||| Sbjct: 989 ttactgaccaccacggagacggagcac 963
>gb|BT017660.1| Zea mays clone EL01N0440E11.c mRNA sequence Length = 997 Score = 46.1 bits (23), Expect = 0.042 Identities = 26/27 (96%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcac 195 |||||||||||||||||| |||||||| Sbjct: 765 ttactgaccaccacggagacggagcac 739
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Plus Query: 182 cggaggcggagcaccaggtgaag 204 ||||||||||||||||||||||| Sbjct: 12389 cggaggcggagcaccaggtgaag 12411
>gb|AF517849.1| Griffithsia japonica isolate Gj532 polyubiquitin mRNA, partial cds Length = 681 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Minus Query: 168 tttactgaccaccacggaggcggagcaccag 198 |||||||||| || ||||||||||||||||| Sbjct: 590 tttactgaccgccgcggaggcggagcaccag 560
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Plus Query: 182 cggaggcggagcaccaggtgaag 204 ||||||||||||||||||||||| Sbjct: 22310754 cggaggcggagcaccaggtgaag 22310776
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 46.1 bits (23), Expect = 0.042 Identities = 35/39 (89%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaagggt 207 |||||| ||||||||||| || ||||||||||| ||||| Sbjct: 1211 ttactggccaccacggagacgaagcaccaggtggagggt 1173
>ref|NM_183832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||| ||||| Sbjct: 221 cggaggcggagcaccaggtggagggt 196
>ref|XM_363356.1| Magnaporthe grisea 70-15 hypothetical protein (MG01282.4) partial mRNA Length = 918 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtg 201 |||||||||||||||||||| ||||| Sbjct: 227 ccaccacggaggcggagcacgaggtg 202
>gb|AY251797.1| Lotharella amoeboformis ubiquitin/actin fusion protein 2 gene, partial cds Length = 706 Score = 44.1 bits (22), Expect = 0.17 Identities = 28/30 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaag 204 ||||||||| ||||||||||| |||||||| Sbjct: 208 accaccacgaaggcggagcacaaggtgaag 179
>gb|AY251796.1| Lotharella amoeboformis ubiquitin/actin fusion protein 1 gene, partial cds Length = 706 Score = 44.1 bits (22), Expect = 0.17 Identities = 28/30 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaag 204 ||||||||| ||||||||||| |||||||| Sbjct: 208 accaccacgaaggcggagcacaaggtgaag 179
>gb|AF517848.1| Griffithsia japonica isolate Gj526 polyubiquitin mRNA, partial cds Length = 741 Score = 44.1 bits (22), Expect = 0.17 Identities = 28/30 (93%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccag 198 ||||||||| || ||||||||||||||||| Sbjct: 741 ttactgaccgccgcggaggcggagcaccag 712
>gb|AY290730.1| Triticum aestivum ubiquitin-like mRNA, partial sequence Length = 510 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||| ||||| Sbjct: 386 cggaggcggagcaccaggtggagggt 361
>emb|Z24723.1|PCUBIQGNA P.chrysosporium ubiquitin gene, complete CDS Length = 2054 Score = 44.1 bits (22), Expect = 0.17 Identities = 34/38 (89%) Strand = Plus / Minus Query: 167 gtttactgaccaccacggaggcggagcaccaggtgaag 204 |||||| ||||||||||||| || ||||| |||||||| Sbjct: 1674 gtttacagaccaccacggagacgaagcacgaggtgaag 1637
>gb|AF386524.1|AF386524 Pyrus communis ubiquitin extension protein (UBI) mRNA, complete cds Length = 651 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtg 201 ||||| |||||||||||||||||||| Sbjct: 232 ccaccgcggaggcggagcaccaggtg 207
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 182 cggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||| ||||| Sbjct: 12628958 cggaggcggagcaccaggtggagggt 12628983 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtg 201 |||||||||||||||||||| Sbjct: 25761098 cggaggcggagcaccaggtg 25761079
>gb|AY101385.1| Cercomonas ATCC50316 polyubiquitin 7 (pub7) gene, partial cds Length = 532 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtgaagggt 207 |||||||||||||| ||||||||||| Sbjct: 201 cggaggcggagcacgaggtgaagggt 176
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 182 cggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||| ||||| Sbjct: 140568 cggaggcggagcaccaggtggagggt 140593
>dbj|AP006454.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1472F02 Length = 55065 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cacggaggcggagcaccaggtg 201 |||||||||||||||||||||| Sbjct: 16918 cacggaggcggagcaccaggtg 16939
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cacggaggcggagcaccaggtg 201 |||||||||||||||||||||| Sbjct: 144782 cacggaggcggagcaccaggtg 144803
>dbj|AK061988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B08, full insert sequence Length = 794 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||| ||||| Sbjct: 323 cggaggcggagcaccaggtggagggt 298
>dbj|AK059242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F10, full insert sequence Length = 1517 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtgaagggt 207 |||||||||||||||||||| ||||| Sbjct: 323 cggaggcggagcaccaggtggagggt 298
>gb|AY912494.1| Nicotiana benthamiana ubiquitin/s27a 40S ribosomal protein gene, complete cds Length = 471 Score = 44.1 bits (22), Expect = 0.17 Identities = 28/30 (93%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaag 204 ||||||||||||||||||||| || ||||| Sbjct: 228 accaccacggaggcggagcacgagatgaag 199
>gb|AF056625.1|AF056625 Magnaporthe grisea strain Guy-11 poly-ubiquitin (PUB4) mRNA, complete cds Length = 1326 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtg 201 |||||||||||||||||||| ||||| Sbjct: 227 ccaccacggaggcggagcacgaggtg 202
>ref|XM_323905.1| Neurospora crassa OR74A hypothetical protein ( ubiquitin - chicken ) (NCU04553.1) partial mRNA Length = 285 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||| ||||| ||||| ||||| Sbjct: 228 accaccacggaggcgaagcacgaggtggagggt 196
>ref|XM_950851.1| Neurospora crassa OR74A hypothetical protein ( ubiquitin - chicken ) (NCU04553.1) partial mRNA Length = 285 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||| ||||| ||||| ||||| Sbjct: 228 accaccacggaggcgaagcacgaggtggagggt 196
>ref|XM_382132.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01956.1) partial mRNA Length = 366 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| ||||| |||||||| ||||| Sbjct: 207 accaccacggagacggaggaccaggtggagggt 175
>emb|X70917.1|GCPOLYUA G.cydonium mRNA for polyubiquitin Length = 1605 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| || |||||||| Sbjct: 1243 accaccacgcaggcggagcacaagatgaagggt 1211 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| || |||||||| Sbjct: 559 accaccacgcaggcggagcacgagatgaagggt 527
>gb|AY251801.1| Lotharella globosa ubiquitin/actin fusion protein 3 gene, partial cds Length = 715 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| || ||||| |||||||||||||| Sbjct: 208 accaccacgaagacggaggaccaggtgaagggt 176
>gb|AY251798.1| Lotharella amoeboformis ubiquitin/actin fusion protein 3 gene, partial cds Length = 706 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| |||||||| || ||||||||||| Sbjct: 208 accaccacgaaggcggagaacaaggtgaagggt 176
>emb|BX072171.1|CNS09RUN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAD1AA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 389 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || |||||||| |||||||| Sbjct: 269 accaccacggagtcgcagcaccagatgaagggt 237
>emb|BX036855.1|CNS090LN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA9AC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 591 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || |||||||| |||||||| Sbjct: 278 accaccacggagtcgcagcaccagatgaagggt 246
>emb|BX034476.1|CNS08YRK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA50BF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 623 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || |||||||| |||||||| Sbjct: 271 accaccacggagtcgcagcaccagatgaagggt 239
>emb|BX023892.1|CNS08QLK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA36BH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 643 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || |||||||| |||||||| Sbjct: 292 accaccacggagtcgcagcaccagatgaagggt 260
>emb|BX017262.1|CNS08LHE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA25DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 614 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || |||||||| |||||||| Sbjct: 267 accaccacggagtcgcagcaccagatgaagggt 235
>emb|BX011966.1|CNS08HEA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA19AC10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 600 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || |||||||| |||||||| Sbjct: 244 accaccacggagtcgcagcaccagatgaagggt 212
>emb|BX007229.1|CNS08DQP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA12AD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 625 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || |||||||| |||||||| Sbjct: 291 accaccacggagtcgcagcaccagatgaagggt 323
>emb|BX007228.1|CNS08DQO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA12AD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 624 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || |||||||| |||||||| Sbjct: 277 accaccacggagtcgcagcaccagatgaagggt 245
>emb|Z31373.1|PCUBIQUI P.chrysosporium (ME446) gene for ubiquitin (partial) Length = 4109 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 171 actgaccaccacggaggcggagcac 195 ||||||||||||||||||| ||||| Sbjct: 3909 actgaccaccacggaggcgaagcac 3933
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||| |||||||||||||| || |||||||| Sbjct: 1418 ttactggccaccacggaggcgcagaaccaggtg 1386
>emb|X67957.1|AMUBIQMRP A.majus mRNA for ubiquitin (partial) Length = 1094 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| ||||| |||| ||||||||| Sbjct: 431 accaccacggagacggaggaccaagtgaagggt 399
>emb|X55717.1|PIUBIQ P. infestans polyubiquitin gene coding for ubiquitin Length = 1632 Score = 42.1 bits (21), Expect = 0.66 Identities = 27/29 (93%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaag 204 |||||||| ||||| |||||||||||||| Sbjct: 984 ccaccacgcaggcgaagcaccaggtgaag 956
>emb|AJ879118.2| Capsicum chinense mRNA for polyubiquitin (ubi gene) Length = 969 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| ||||| || ||||||||||| Sbjct: 311 accaccacggagacggaggacaaggtgaagggt 279
>emb|AJ309010.1|NTA309010 Nicotiana tabacum mRNA for polyubiquitin-like protein Length = 501 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| ||||| || ||||||||||| Sbjct: 324 accaccacggagacggaggacaaggtgaagggt 292
>emb|AJ223328.1|NTAJ3328 Nicotiana tabacum TUQG2 gene, complete CDS Length = 2074 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| ||||| || ||||||||||| Sbjct: 1141 accaccacggagacggagaacaaggtgaagggt 1109
>ref|NM_057428.3| Drosophila melanogaster Ribosomal protein L40 CG2960-RA (RpL40), mRNA Length = 660 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||||| ||| ||||| Sbjct: 349 accaccacgcaggcggagcaccaagtgcagggt 317
>gb|AY075451.1| Drosophila melanogaster RE10554 full length cDNA Length = 602 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||||| ||| ||||| Sbjct: 290 accaccacgcaggcggagcaccaagtgcagggt 258
>gb|AY066029.1| Branchiostoma belcheri tsingtaunese ubiquitin/ribosomal protein S27a fusion protein (Ubf80) mRNA, complete cds Length = 586 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||| |||||||||||||||| ||| ||||| Sbjct: 267 accacctcggaggcggagcaccaagtggagggt 235
>gb|DQ393578.1| Metarhizium anisopliae polyubiquitin mRNA, complete cds Length = 1194 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| |||||||| || ||||||||||| Sbjct: 332 accaccacgaaggcggagaacgaggtgaagggt 300
>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR11D14, complete sequence Length = 158347 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||||| ||| ||||| Sbjct: 54633 accaccacgcaggcggagcaccaagtgcagggt 54665
>gb|DQ350765.1| Ajellomyces capsulatus polyubiquitin-like protein (UBI1) gene, partial sequence Length = 1505 Score = 42.1 bits (21), Expect = 0.66 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 ccacggaggcggagcaccaggtgaagggt 207 |||||||| ||||| |||||||||||||| Sbjct: 507 ccacggagacggagaaccaggtgaagggt 479
>gb|AF184279.1|AF184279 Oryza sativa polyubiquitin (RUBQ1) gene, complete cds Length = 3184 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtg 201 |||||| |||||||||||||| || |||||||| Sbjct: 3075 ttactggccaccacggaggcgcagaaccaggtg 3043
>gb|AF154647.1| Nicotiana tabacum clone PR32 mRNA sequence Length = 637 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| ||||| || ||||||||||| Sbjct: 213 accaccacggagacggaggacaaggtgaagggt 181
>dbj|AB182939.1| Populus nigra PnUB1 mRNA for polyubiquitin, complete cds Length = 1146 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||| |||| ||| ||||| Sbjct: 912 accaccacggaggcggagaaccaagtggagggt 880
>ref|XM_317555.2| Anopheles gambiae str. PEST ENSANGP00000010158 (ENSANGG00000007669), mRNA Length = 579 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| || |||||||| |||||||| Sbjct: 273 accaccacggagtcgcagcaccagatgaagggt 241
>dbj|AK108207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D06, full insert sequence Length = 686 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||| ||||| ||||| Sbjct: 280 accaccacgcaggcggagcacgaggtggagggt 248
>emb|X15338.1|NCUBI3 Neurospora crassa UBI 3 mRNA for ubiquitin fusion protein Length = 611 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||| ||||| ||||| ||||| Sbjct: 213 accaccacggaggcgaagcacgaggtggagggt 181
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||||| ||| ||||| Sbjct: 196974 accaccacgcaggcggagcaccaagtgcagggt 196942
>gb|AC004380.1|AC004380 Drosophila melanogaster DNA sequence (P1 DS06843 (D96)), complete sequence Length = 51065 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||| ||||||||||||| ||| ||||| Sbjct: 21115 accaccacgcaggcggagcaccaagtgcagggt 21083
>gb|AF053563.1|AF053563 Mesembryanthemum crystallinum ubiquitin mRNA, partial cds Length = 543 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||||||| || ||||| ||||| Sbjct: 330 accaccacggaggcggaggacaaggtggagggt 298
>emb|AJ575140.1|SMA575140 Sordaria macrospora partial smu5995 gene for polyubiquitin homolog Length = 626 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| |||||||||| ||| ||||| Sbjct: 420 accaccacggagacggagcaccaagtgcagggt 388
>gb|U01220.1|U01220 Neurospora crassaA ubiquitin/ribosomal protein S27a fusion protein (ubi/crp-6) gene, complete cds Length = 956 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||| ||||| ||||| ||||| Sbjct: 642 accaccacggaggcgaagcacgaggtggagggt 610
>gb|M22428.1|DROUBIA D.melanogaster ubiquitin protein gene, complete cds Length = 2620 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 |||||||||||| ||||| |||| ||||||||| Sbjct: 1939 accaccacggagacggaggaccaagtgaagggt 1907
>gb|U01221.1|NCUBICRP6 Neurospora crassa 74OR23 1A ubiquitin/ribosomal protein S27a fusion protein (ubi/crp-6) mRNA, complete cds Length = 677 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Minus Query: 175 accaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||| ||||| ||||| ||||| Sbjct: 270 accaccacggaggcgaagcacgaggtggagggt 238
>gb|AY826135.1| Aedes albopictus clone AL_315 ribosomal protein S27a mRNA, complete cds Length = 471 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||| ||||||| ||| ||||| Sbjct: 227 ccaccacggaggcgcagcaccaagtgcagggt 196
>ref|NM_192270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtg 201 |||||||||||||||||||| Sbjct: 221 cggaggcggagcaccaggtg 202
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtg 201 |||||||||||||||||||| Sbjct: 144048 cggaggcggagcaccaggtg 144029 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtg 201 |||||||||||||||||||| Sbjct: 138341 cggaggcggagcaccaggtg 138322
>ref|XM_953710.1| Neurospora crassa OR74A hypothetical protein ( (X74405) polyubiquitin [Artemia franciscana] ) (NCU05995.1) partial mRNA Length = 918 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaag 204 |||||| || ||||||||||| ||||||| |||||| Sbjct: 918 ttactggccgccacggaggcgcagcaccaagtgaag 883
>ref|XM_325849.1| Neurospora crassa OR74A hypothetical protein ( (X74405) polyubiquitin [Artemia franciscana] ) (NCU05995.1) partial mRNA Length = 918 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaag 204 |||||| || ||||||||||| ||||||| |||||| Sbjct: 918 ttactggccgccacggaggcgcagcaccaagtgaag 883
>emb|AL445072.17| Human DNA sequence from clone RP11-13E5 on chromosome X Contains a novel gene, the gene for a novel protein similar to KIAA1892 and a CpG island, complete sequence Length = 134277 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cacttattcattactcaata 30 |||||||||||||||||||| Sbjct: 86427 cacttattcattactcaata 86446
>gb|AY251800.1| Lotharella globosa ubiquitin/actin fusion protein 2 gene, partial cds Length = 712 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| ||||||||||| || ||||||||||| Sbjct: 207 ccaccgcggaggcggaggacaaggtgaagggt 176
>emb|X13140.1|NCUBQ Neurospora crassa ubiquitin gene Length = 2249 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 169 ttactgaccaccacggaggcggagcaccaggtgaag 204 |||||| || ||||||||||| ||||||| |||||| Sbjct: 1782 ttactggccgccacggaggcgcagcaccaagtgaag 1747
>emb|AJ416499.1|POS416499 Pleurotus ostreatus partial mRNA for putative ubiquitin (ubq1 gene) Length = 729 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcac 195 |||||||||||||||||||| Sbjct: 170 ccaccacggaggcggagcac 151
>dbj|D28123.1|SOYSUBI3 Glycine max SUBI-3 gene for ubiquitin, complete cds Length = 2170 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| ||||| || ||||||||||| Sbjct: 1374 ccaccacggagacggaggacgaggtgaagggt 1343
>gb|AF429430.1|AF429430 Olea europaea polyubiquitin OUB2 mRNA, complete cds Length = 1666 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| ||||| || ||||||||||| Sbjct: 1448 ccaccacggagacggaggacaaggtgaagggt 1417
>gb|AF429429.1|AF429429 Olea europaea polyubiquitin OUB1 mRNA, complete cds Length = 1184 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| ||||| || ||||||||||| Sbjct: 953 ccaccacggagtcggaggacaaggtgaagggt 922
>dbj|AB210600.1| Ciona intestinalis mRNA for transcription factor protein, complete cds, clone: ciad090j17 Length = 2225 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gacgaaccaggatgtttact 173 |||||||||||||||||||| Sbjct: 307 gacgaaccaggatgtttact 326
>gb|AY190601.1| Malus x domestica ubiquitin/ribosomal fusion protein mRNA, complete cds Length = 729 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| ||||||||||| |||||||| ||||| Sbjct: 287 ccaccgcggaggcggagtaccaggtggagggt 256
>gb|AF298826.1|AF298826 Prunus avium ubiquitin/ribosomal protein 27a (Ubi) mRNA, complete cds Length = 1323 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||| ||||| ||||| ||||| Sbjct: 261 ccaccacggaggcgaagcacaaggtggagggt 230
>gb|AY099128.1| Lotharella globosa isolate pub3 polyubiquitin gene, partial cds Length = 295 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||||||||| || || ||||||||||| Sbjct: 207 ccaccacggaggcgaaggacaaggtgaagggt 176
>gb|U86866.1|ACU86866 Actinidia chinensis polyubiquitin (ACU2) mRNA, partial cds Length = 173 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| |||| ||| ||||| Sbjct: 124 ccaccacggaggcggagaaccaagtggagggt 93
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12 Length = 177049 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtg 201 |||||||||||||||||||| Sbjct: 1022 cggaggcggagcaccaggtg 1003
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtg 201 |||||||||||||||||||| Sbjct: 63562 cggaggcggagcaccaggtg 63543
>emb|Z93118.1|MAZ93118 M.acuminata mRNA; clone pBAN UU116 Length = 791 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtgaagg 205 |||||| ||||||||||||||||| Sbjct: 616 cggagggggagcaccaggtgaagg 593 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 167 ccaccacggaggcggaggacaaggtggagggt 136
>dbj|AK103890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150D17, full insert sequence Length = 783 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggaggcggagcaccaggtg 201 |||||||||||||||||||| Sbjct: 300 cggaggcggagcaccaggtg 281
>dbj|D16248.1|SOYUBI Glycine max Subi-1 gene for ubiquitin, complete cds Length = 4955 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| ||||| || ||||||||||| Sbjct: 3542 ccaccacggagacggaggacgaggtgaagggt 3511
>gb|AF502576.1| Musa acuminata ubiquitin (UBQ2) gene, complete cds Length = 1602 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| |||||||| ||||| ||||| Sbjct: 1139 ccaccacggagacggagcacaaggtggagggt 1108 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| |||||||||| ||| ||||| Sbjct: 911 ccaccacggagacggagcaccaagtggagggt 880 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| |||||||| ||||| ||||| Sbjct: 683 ccaccacggagacggagcacaaggtggagggt 652 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| |||||||| ||||| ||||| Sbjct: 455 ccaccacggagacggagcacaaggtggagggt 424 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||||||||| || ||||| ||||| Sbjct: 227 ccaccacggaggcggagtacaaggtggagggt 196
>gb|U27577.1|TVU27577 Trichomonas vaginalis polyubiquitin (UbA) mRNA, partial cds Length = 2347 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 |||||||| |||||||| || ||||||||||| Sbjct: 2306 ccaccacgaaggcggagaacgaggtgaagggt 2275
>gb|M60175.1|BLYMUB1 Barley ubiquitin (mub1) gene, complete cds Length = 1815 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| ||||| |||||||||||||| ||||| Sbjct: 785 ccaccgcggagtcggagcaccaggtggagggt 754
>gb|M74101.1|TOBUBI11A Nicotiana sylvestris (clone 6PU11) hexameric polyubiquitin (ubi11) mRNA, complete cds Length = 1606 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||||||||| || ||||| ||||||||||| Sbjct: 1405 ccaccacggagacgaagcacgaggtgaagggt 1374
>gb|AY748811.1| Thaumatomonas sp. DDM-2005 polyubiquitin (UBQ) gene, partial cds Length = 306 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccaccacggaggcggagcaccaggtgaagggt 207 ||||| || ||||||||||| ||||||||||| Sbjct: 227 ccaccgcgcaggcggagcacgaggtgaagggt 196 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,588,690 Number of Sequences: 3902068 Number of extensions: 1588690 Number of successful extensions: 98169 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97601 Number of HSP's gapped (non-prelim): 568 length of query: 207 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 185 effective length of database: 17,147,199,772 effective search space: 3172231957820 effective search space used: 3172231957820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
