>GUX1_HUMGT (P15828) Exoglucanase 1 precursor (EC 3.2.1.91) (Exoglucanase I)|
           (Exocellobiohydrolase I) (1,4-beta-cellobiohydrolase)
           (Beta-glucancellobiohydrolase)
          Length = 525

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 283 TIDVMLTYDSRRRRRSTPSGATMCYFQNKW 194
           T+   +T DS  R     SG+T CY  NKW
Sbjct: 45  TVQASITLDSNWRWTHQVSGSTNCYTGNKW 74

>GEI8_CAEEL (P34333) Gex-3-interacting protein 8|
          Length = 1780

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 75   LQSSNNHHGCMEQEKLKRDDGIQ---GMQKKMHHH 170
            LQ    HHG   ++K KR  GI+    MQ   H H
Sbjct: 1280 LQQQQQHHGTQPEQKSKRKSGIESITSMQGAPHRH 1314

>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive|
           photomorphogenesis protein 1)
          Length = 672

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
 Frame = +1

Query: 4   HVYIHERTTES---CAQMNAY---QHANDNYKVVIIIMGAWNKRN*KGMMEYKECKKR 159
           H  + E TT S   C   N Y   Q A+ +Y+ ++ +   W     K +MEY+E +KR
Sbjct: 408 HCPVVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVTV---WTMTTRKSLMEYEEHEKR 462

>GUX1_NEUCR (P38676) Exoglucanase 1 precursor (EC 3.2.1.91)|
           (Exocellobiohydrolase 1) (1,4-beta-cellobiohydrolase)
          Length = 516

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 283 TIDVMLTYDSRRRRRSTPSGATMCYFQNKWHS 188
           T++  +  D+  R     SG+T CY  NKW +
Sbjct: 43  TLNTTMVLDANWRWTHATSGSTKCYTGNKWQA 74

>RPM1_CAEEL (Q17551) Ubiquitin ligase protein rpm-1 (EC 6.3.2.-)|
            (Pam/highwire/rpm-1 protein) (Regulator of presynaptic
            morphology protein 1) (Synapse defective protein 3)
          Length = 3766

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 178  LAGYYATYSGNSTSWLRTGSISSSFGCHM*ASH 276
            L+G+ +T +G    WL TGS+  +  C +  SH
Sbjct: 1963 LSGHTSTSAGFLAKWLPTGSVVDASKCQLSLSH 1995

>CARB_BACST (O50302) Carbamoyl-phosphate synthase pyrimidine-specific large|
           chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase
           ammonia chain)
          Length = 1064

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = +1

Query: 19  ERTTESCAQMNAYQHANDNY---KVVIIIMGAWNKRN*KGMMEYKECKKRCIITISLAGY 189
           E T+E+    + Y+  N++    K  +I++G+   R  +G+ E+      C++ I  AGY
Sbjct: 528 EFTSETPYYYSTYEEENESIVTEKPSVIVLGSGPIRIGQGI-EFDYATVHCVLAIKQAGY 586

Query: 190 YATYSGNSTSWLRT 231
            A    N+   + T
Sbjct: 587 EAIIINNNPETVST 600


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,732,046
Number of Sequences: 219361
Number of extensions: 778815
Number of successful extensions: 1789
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)