| Clone Name | rbaet75g01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-bi... | 31 | 0.91 | 2 | Y4ZB_RHISN (P55729) Putative transposase y4zB | 28 | 7.7 | 3 | YQ91_CAEEL (Q10030) Hypothetical protein C27D6.1 | 28 | 7.7 |
|---|
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 30.8 bits (68), Expect = 0.91 Identities = 19/33 (57%), Positives = 23/33 (69%) Frame = -1 Query: 302 LKAKVAEAMEVLRSAQQHTNQSPEQQLASLSLN 204 LKAKVAEAM+VLRS +QLASL+L+ Sbjct: 600 LKAKVAEAMDVLRSV---AAGGATEQLASLNLS 629
>Y4ZB_RHISN (P55729) Putative transposase y4zB| Length = 356 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +2 Query: 197 GRHSTKAKPAAARGTGWCAAERCGEP 274 G +T+ A G C ERCGEP Sbjct: 5 GTPTTRRSAAGTAGADLCPVERCGEP 30
>YQ91_CAEEL (Q10030) Hypothetical protein C27D6.1| Length = 782 Score = 27.7 bits (60), Expect = 7.7 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = +3 Query: 6 GDNPEDTLNKITNPCK*NKPIHGKPKRLVQLLAKAKSQINQVIFSLDKFDMVQKLSLFS 182 GDN T KI + +GK + L+ + K IN V+F ++K ++K+++FS Sbjct: 73 GDNEFKTSFKIFTIFEPTSTPNGKIQSLITISYK----INNVLFKMEKEIFIEKVNIFS 127 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,118,244 Number of Sequences: 219361 Number of extensions: 651826 Number of successful extensions: 1704 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1667 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1704 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)