| Clone Name | rbaet75f03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY724686.1| Neotyphodium uncinatum LolF-2 (lolF) gene, lolF-2 allele, complete cds; and SeqX (seqX) gene, partial sequence Length = 7477 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 51 tttggggcaagctagcacatgcaa 74 |||||||||||||||||||||||| Sbjct: 7161 tttggggcaagctagcacatgcaa 7138
>emb|AL365396.10| Human DNA sequence from clone RP11-338N12 on chromosome 9 Contains a phosphoribosyl pyrophosphate synthetase 2 (PRPS2) pseudogene, complete sequence Length = 114016 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 cttggcagtatgtagttctgg 129 ||||||||||||||||||||| Sbjct: 28479 cttggcagtatgtagttctgg 28499
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 agacaagtactatatatataacttg 112 ||||||| ||||||||||||||||| Sbjct: 35202 agacaagaactatatatataacttg 35178
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 agacaagtactatatatataacttg 112 ||||||| ||||||||||||||||| Sbjct: 22826427 agacaagaactatatatataacttg 22826403
>gb|AC119408.23| Medicago truncatula clone mth2-5f18, complete sequence Length = 120127 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gataacttatatacctggga 29 |||||||||||||||||||| Sbjct: 86449 gataacttatatacctggga 86430
>gb|AC128684.4| Homo sapiens 3 BAC RP11-117K16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 80307 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tatatatataacttggcagt 117 |||||||||||||||||||| Sbjct: 62122 tatatatataacttggcagt 62141
>gb|AC182701.2| Populus trichocarpa clone Pop1-74K8, complete sequence Length = 93140 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aagtactatatatataactt 111 |||||||||||||||||||| Sbjct: 71487 aagtactatatatataactt 71468
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 208 agcgcctcgaaacgcgccgtcagggtctcgaagtccagaggcatgttcggatgaac 263 ||||||||||| || || || || || ||| ||||||||||||| || |||||||| Sbjct: 21309015 agcgcctcgaagcgtgcagtaagagtttcgtagtccagaggcatatttggatgaac 21309070
>dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038K02 Length = 118635 Score = 40.1 bits (20), Expect = 4.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 208 agcgcctcgaaacgcgccgtcagggtctcgaagtccagaggcatgttcggatgaac 263 ||||||||||| || || || || || ||| ||||||||||||| || |||||||| Sbjct: 41394 agcgcctcgaagcgtgcagtaagagtttcgtagtccagaggcatatttggatgaac 41449
>dbj|AK104984.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-D03, full insert sequence Length = 1814 Score = 40.1 bits (20), Expect = 4.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 208 agcgcctcgaaacgcgccgtcagggtctcgaagtccagaggcatgttcggatgaac 263 ||||||||||| || || || || || ||| ||||||||||||| || |||||||| Sbjct: 1499 agcgcctcgaagcgtgcagtaagagtttcgtagtccagaggcatatttggatgaac 1444
>dbj|AK073078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016L03, full insert sequence Length = 1844 Score = 40.1 bits (20), Expect = 4.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 208 agcgcctcgaaacgcgccgtcagggtctcgaagtccagaggcatgttcggatgaac 263 ||||||||||| || || || || || ||| ||||||||||||| || |||||||| Sbjct: 1529 agcgcctcgaagcgtgcagtaagagtttcgtagtccagaggcatatttggatgaac 1474
>emb|CT009564.11| Mouse DNA sequence from clone RP23-16F13 on chromosome 17, complete sequence Length = 157729 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 cgtcagggtctcgaagtccagagg 248 ||||||||||| |||||||||||| Sbjct: 117434 cgtcagggtctggaagtccagagg 117457 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,735,378 Number of Sequences: 3902068 Number of extensions: 2735378 Number of successful extensions: 44545 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44512 Number of HSP's gapped (non-prelim): 33 length of query: 322 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 300 effective length of database: 17,147,199,772 effective search space: 5144159931600 effective search space used: 5144159931600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)