| Clone Name | rbaet75e08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 500 bits (252), Expect = e-138 Identities = 255/256 (99%) Strand = Plus / Minus Query: 41 cagagaaaaacaaacacatgaagaacagaacgagatgagacatatattacacacgatctg 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1174 cagagaaaaacaaacacatgaagaacagaacgagatgagacatatattacacacgatctg 1115 Query: 101 aacgtgacaaggagcaaacagaagaatctaccacccgctccatttcacattatcccccct 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 aacgtgacaaggagcaaacagaagaatctaccacccgctccatttcacattatcccccct 1055 Query: 161 cactggtccttatttatcatacagtacaatacagacgcccccatcttccctatccccggc 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1054 cactggtccttatttatcatacagtacaatacagacgcccccatcttccctatctccggc 995 Query: 221 cgtcttcctccggcgatcgacgtatacacggacggtccaatgctaccttgcttttgatgg 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 994 cgtcttcctccggcgatcgacgtatacacggacggtccaatgctaccttgcttttgatgg 935 Query: 281 acggggactacatgga 296 |||||||||||||||| Sbjct: 934 acggggactacatgga 919
>emb|AL591304.1| Human DNA sequence from clone RP11-21G12 on chromosome 6, complete sequence Length = 35013 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 aaaaacaaacacatgaagaacagaa 70 ||||||||||||||||| ||||||| Sbjct: 27216 aaaaacaaacacatgaacaacagaa 27240
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 aaacaaacacatgaagaacag 68 ||||||||||||||||||||| Sbjct: 6009611 aaacaaacacatgaagaacag 6009631 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 aaacaaacacatgaagaacag 68 ||||||||||||||||||||| Sbjct: 6003871 aaacaaacacatgaagaacag 6003851
>gb|AC087896.15|AC087896 Homo sapiens 12q BAC RP11-777K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183562 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 aaaaacaaacacatgaagaacagaa 70 ||||||||||||||||| ||||||| Sbjct: 144429 aaaaacaaacacatgaacaacagaa 144405
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 aaacaaacacatgaagaacag 68 ||||||||||||||||||||| Sbjct: 30450 aaacaaacacatgaagaacag 30470 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 aaacaaacacatgaagaacag 68 ||||||||||||||||||||| Sbjct: 24710 aaacaaacacatgaagaacag 24690
>gb|BC090193.1| Xenopus laevis cDNA clone MGC:85054 IMAGE:6327047, complete cds Length = 1785 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 tggtccttatttatcatacag 184 ||||||||||||||||||||| Sbjct: 1462 tggtccttatttatcatacag 1442
>gb|AC113970.8| Mus musculus chromosome 1, clone RP23-125E16, complete sequence Length = 235703 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 aaaaacaaacacatgaagaa 65 |||||||||||||||||||| Sbjct: 83070 aaaaacaaacacatgaagaa 83051
>emb|AL590111.14| Human DNA sequence from clone RP11-570F3 on chromosome 10 Contains part of a novel gene (FLJ30499) and the 3' end of a novel gene (FLJ30450), complete sequence Length = 41069 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ctcactggtccttatttatc 178 |||||||||||||||||||| Sbjct: 3262 ctcactggtccttatttatc 3243
>emb|BX571768.19| Zebrafish DNA sequence from clone DKEYP-2C4 in linkage group 11, complete sequence Length = 111222 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 tatttatcatacagtacaat 190 |||||||||||||||||||| Sbjct: 36635 tatttatcatacagtacaat 36616
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 cccggccgtcttcctccggc 234 |||||||||||||||||||| Sbjct: 951280 cccggccgtcttcctccggc 951261
>emb|AL845486.6| Mouse DNA sequence from clone RP23-236H7 on chromosome 2, complete sequence Length = 198481 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ggatcagagaaaaacaaaca 56 |||||||||||||||||||| Sbjct: 102656 ggatcagagaaaaacaaaca 102675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,194,254 Number of Sequences: 3902068 Number of extensions: 3194254 Number of successful extensions: 60297 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60256 Number of HSP's gapped (non-prelim): 41 length of query: 296 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 274 effective length of database: 17,147,199,772 effective search space: 4698332737528 effective search space used: 4698332737528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)