>gb|AC026303.25| Homo sapiens 3 BAC RP11-581D23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 35018

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 50    tttccaaatcaaacacaccctt 71
             ||||||||||||||||||||||
Sbjct: 21294 tttccaaatcaaacacaccctt 21315

>gb|AY665468.1| Homo sapiens clone B4-E11 carcinoma associated protein HOJ-1 mRNA,
            complete cds, alternatively spliced
          Length = 5472

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   gcacagggtatggctccaag 99
            ||||||||||||||||||||
Sbjct: 1565 gcacagggtatggctccaag 1546

>ref|XM_605818.2| PREDICTED: Bos taurus similar to mediator of RNA polymerase II
            transcription, subunit 12 homolog (LOC527427), mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   tccattgaattgctggaatc 38
            ||||||||||||||||||||
Sbjct: 1172 tccattgaattgctggaatc 1153

>ref|NM_001024549.2| Bos taurus hypothetical protein LOC515639 (C12orf2), mRNA
          Length = 1869

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   gcacagggtatggctccaag 99
            ||||||||||||||||||||
Sbjct: 1608 gcacagggtatggctccaag 1589

>ref|XM_860650.1| PREDICTED: Canis familiaris similar to Protein C12orf2 (Carcinoma
            associated protein HOJ-1), transcript variant 3
            (LOC477666), mRNA
          Length = 1697

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   gcacagggtatggctccaag 99
            ||||||||||||||||||||
Sbjct: 1526 gcacagggtatggctccaag 1507

>ref|XM_534859.2| PREDICTED: Canis familiaris similar to Protein C12orf2 (Carcinoma
            associated protein HOJ-1), transcript variant 1
            (LOC477666), mRNA
          Length = 1677

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   gcacagggtatggctccaag 99
            ||||||||||||||||||||
Sbjct: 1506 gcacagggtatggctccaag 1487

>gb|AC115919.14| Mus musculus chromosome 3, clone RP24-493L18, complete sequence
          Length = 195790

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tccattgaattgctggaatc 38
              ||||||||||||||||||||
Sbjct: 105938 tccattgaattgctggaatc 105957

>gb|AC144617.10| Medicago truncatula clone mth2-7m9, complete sequence
          Length = 122853

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    ttccaaatcaaacacacccttagc 74
             ||||||| ||||||||||||||||
Sbjct: 49751 ttccaaaccaaacacacccttagc 49728

>emb|BX322639.2| Human DNA sequence from clone RP11-313J2 on chromosome 10 Contains a
             zinc finger protein pseudogene and a CpG island, complete
             sequence
          Length = 87299

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    cattcccttccattgaattg 30
             ||||||||||||||||||||
Sbjct: 12379 cattcccttccattgaattg 12398

>emb|BX470121.7| Zebrafish DNA sequence from clone DKEY-267G17 in linkage group 7,
            complete sequence
          Length = 97476

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 41   tatacttcatttccaaatcaaaca 64
            |||||||||||| |||||||||||
Sbjct: 3895 tatacttcatttgcaaatcaaaca 3872

>gb|AC182462.3| Pan troglodytes BAC clone CH251-572M16 from chromosome 1, complete
             sequence
          Length = 158275

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    gcacagggtatggctccaag 99
             ||||||||||||||||||||
Sbjct: 10074 gcacagggtatggctccaag 10055

>gb|AC055707.33| Homo sapiens 12 BAC RP11-877E17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 138370

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    gcacagggtatggctccaag 99
             ||||||||||||||||||||
Sbjct: 11206 gcacagggtatggctccaag 11225

>gb|AC158502.3| Medicago truncatula chromosome 7 BAC clone mth2-73i16, complete
             sequence
          Length = 124955

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    caaacacacccttagcttat 78
             ||||||||||||||||||||
Sbjct: 46592 caaacacacccttagcttat 46573

>dbj|AB179017.1| Macaca fascicularis testis cDNA clone: QtsA-11483, similar to human
            chromosome 12 open reading frame 2 (C12orf2), mRNA,
            RefSeq: NM_007211.2
          Length = 1750

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   gcacagggtatggctccaag 99
            ||||||||||||||||||||
Sbjct: 1556 gcacagggtatggctccaag 1537

>dbj|AK042296.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630079M02 product:NOPAR homolog [Homo
            sapiens], full insert sequence
          Length = 3748

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   tccattgaattgctggaatc 38
            ||||||||||||||||||||
Sbjct: 1852 tccattgaattgctggaatc 1833

>dbj|AK047743.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
            enriched library, clone:C030020L10 product:NOPAR2 homolog
            [Homo sapiens], full insert sequence
          Length = 2386

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   tccattgaattgctggaatc 38
            ||||||||||||||||||||
Sbjct: 1467 tccattgaattgctggaatc 1448

>dbj|AK129475.1| Mus musculus mRNA for mKIAA3007 protein
          Length = 3743

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   tccattgaattgctggaatc 38
            ||||||||||||||||||||
Sbjct: 1749 tccattgaattgctggaatc 1730

>gb|BT021890.1| Bos taurus chromosome 12 open reading frame 2 (C12orf2), mRNA,
            complete cds
          Length = 1671

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   gcacagggtatggctccaag 99
            ||||||||||||||||||||
Sbjct: 1500 gcacagggtatggctccaag 1481

>dbj|AB093206.1| Homo sapiens C12ORF2 mRNA for C12ORF2, complete cds
          Length = 5290

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   gcacagggtatggctccaag 99
            ||||||||||||||||||||
Sbjct: 1615 gcacagggtatggctccaag 1596

>gb|BC111208.1| Bos taurus hypothetical protein LOC515639, mRNA (cDNA clone
            MGC:134553 IMAGE:8058352), complete cds
          Length = 1869

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   gcacagggtatggctccaag 99
            ||||||||||||||||||||
Sbjct: 1608 gcacagggtatggctccaag 1589

>emb|AL844218.7| Mouse DNA sequence from clone RP23-409B1 on chromosome 4, complete
             sequence
          Length = 197419

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   cttacacacactgaaaaagt 119
             ||||||||||||||||||||
Sbjct: 20711 cttacacacactgaaaaagt 20692

>emb|AL627074.11| Mouse DNA sequence from clone RP23-465A17 on chromosome 3, complete
              sequence
          Length = 177133

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    tacacacactgaaaaagtag 121
              ||||||||||||||||||||
Sbjct: 104358 tacacacactgaaaaagtag 104377


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,025,171
Number of Sequences: 3902068
Number of extensions: 2025171
Number of successful extensions: 38609
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38578
Number of HSP's gapped (non-prelim): 31
length of query: 288
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 266
effective length of database: 17,147,199,772
effective search space: 4561155139352
effective search space used: 4561155139352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)