| Clone Name | rbaet75d02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z92793.1|CEH15M21 Caenorhabditis elegans Fosmid H15M21, complete sequence Length = 12076 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 aatccagtcaaaactcaagt 73 |||||||||||||||||||| Sbjct: 3406 aatccagtcaaaactcaagt 3425
>emb|BX511023.8| Zebrafish DNA sequence from clone DKEY-148A12 in linkage group 2, complete sequence Length = 244788 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ttcataatgttacaggggtt 92 |||||||||||||||||||| Sbjct: 239755 ttcataatgttacaggggtt 239774
>ref|NM_059710.3| Caenorhabditis elegans Deacetylase Complex Protein family member (dcp-66) (dcp-66) mRNA, complete cds Length = 2192 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aatccagtcaaaactcaagt 73 |||||||||||||||||||| Sbjct: 116 aatccagtcaaaactcaagt 97
>ref|NM_182031.2| Caenorhabditis elegans Deacetylase Complex Protein family member (dcp-66) (dcp-66) mRNA, complete cds Length = 2201 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aatccagtcaaaactcaagt 73 |||||||||||||||||||| Sbjct: 116 aatccagtcaaaactcaagt 97
>emb|CR848674.8| Zebrafish DNA sequence from clone DKEY-73G17 in linkage group 16, complete sequence Length = 149652 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 tcaagttcataatgttaca 86 ||||||||||||||||||| Sbjct: 95302 tcaagttcataatgttaca 95284
>emb|CR524827.16| Zebrafish DNA sequence from clone CH211-167H17 in linkage group 16, complete sequence Length = 153848 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 tcaagttcataatgttaca 86 ||||||||||||||||||| Sbjct: 21225 tcaagttcataatgttaca 21207
>gb|AY267893.1| Blepharida sp. JXB-2003d mitochondrial cytochrome oxidase subunit I (COI) and cytochrome oxidase subunit II (COII) genes, partial sequence Length = 1128 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 aagttcataatgttacagg 88 ||||||||||||||||||| Sbjct: 889 aagttcataatgttacagg 907
>gb|AY267888.1| Blepharida hinchahuevosi mitochondrial cytochrome oxidase subunit I (COI) and cytochrome oxidase subunit II (COII) genes, partial sequence Length = 1414 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 aagttcataatgttacagg 88 ||||||||||||||||||| Sbjct: 1127 aagttcataatgttacagg 1145
>emb|BX936428.10| Zebrafish DNA sequence from clone RP71-19F19 in linkage group 5, complete sequence Length = 188618 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 ttcaaatccagtcaaaact 68 ||||||||||||||||||| Sbjct: 115462 ttcaaatccagtcaaaact 115444
>gb|AC010748.5| Homo sapiens BAC clone CTD-2532L16 from 16, complete sequence Length = 145459 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 cttcaaatccagtcaaaac 67 ||||||||||||||||||| Sbjct: 42586 cttcaaatccagtcaaaac 42568
>emb|BX649392.6| Zebrafish DNA sequence from clone DKEY-84J12 in linkage group 5, complete sequence Length = 197352 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 ttcaaatccagtcaaaact 68 ||||||||||||||||||| Sbjct: 139987 ttcaaatccagtcaaaact 140005
>gb|AC006349.3|AC006349 Homo sapiens PAC clone RP5-892G5 from 14q24.3, complete sequence Length = 111937 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 59 agtcaaaactcaagttcataatg 81 ||||||||||||||| ||||||| Sbjct: 100180 agtcaaaactcaagtgcataatg 100202
>emb|AL929237.17| Zebrafish DNA sequence from clone CH211-213I16 in linkage group 20, complete sequence Length = 205393 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 60 gtcaaaactcaagttcata 78 ||||||||||||||||||| Sbjct: 6543 gtcaaaactcaagttcata 6525
>emb|AL845280.4| Mouse DNA sequence from clone RP23-265L1 on chromosome X, complete sequence Length = 142846 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 48 gcttcaaatccagtcaaaa 66 ||||||||||||||||||| Sbjct: 118652 gcttcaaatccagtcaaaa 118670 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 989,607 Number of Sequences: 3902068 Number of extensions: 989607 Number of successful extensions: 125981 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125951 Number of HSP's gapped (non-prelim): 30 length of query: 107 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 86 effective length of database: 17,151,101,840 effective search space: 1474994758240 effective search space used: 1474994758240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)