>APC_MOUSE (Q61315) Adenomatous polyposis coli protein (Protein APC) (mAPC)|
          Length = 2845

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -1

Query: 216  TESSGANRMAYTSPG*Q*SNQ 154
            T+SSG+ +M+YTSPG Q S Q
Sbjct: 2356 TKSSGSGKMSYTSPGRQLSQQ 2376

>APC_HUMAN (P25054) Adenomatous polyposis coli protein (Protein APC)|
          Length = 2843

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -1

Query: 216  TESSGANRMAYTSPG*Q*SNQ 154
            T+SSG+ +M+YTSPG Q S Q
Sbjct: 2356 TKSSGSGKMSYTSPGRQMSQQ 2376

>LEU2_CANMA (Q00464) 3-isopropylmalate dehydratase (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 770

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 106 NCYNNILLPINSKEETLVASLLPRRSVGHSVRT*GLRISIPGRQLQ 243
           N + N LLPI   ++ + + L+P    GH      L I +P +Q++
Sbjct: 652 NSFKNFLLPIRIPQDVIESKLVPVVKAGHK-----LTIDLPNQQIK 692

>APC_RAT (P70478) Adenomatous polyposis coli protein (Protein APC)|
          Length = 2842

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -1

Query: 216  TESSGANRMAYTSPG*Q*SNQ 154
            T+SSG+ +M+YTSPG Q S Q
Sbjct: 2356 TKSSGSGKMSYTSPGRQLSQQ 2376

>APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)|
          Length = 2829

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 261  EFWDAPLKLASRN*DTESSGANRMAYTSPG*Q 166
            +F   P   +     T+SSG+ RM+YTSPG Q
Sbjct: 2339 KFSQLPRTTSPSTASTKSSGSGRMSYTSPGRQ 2370

>SCRL3_ARATH (P82622) Hypothetical protein SCRL3 precursor|
          Length = 87

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 231 TPASKVHPRIPRVRICSCSR 290
           T A+++ P +P  R+C+CSR
Sbjct: 66  TDATQISPSLPPQRVCNCSR 85


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,106,730
Number of Sequences: 219361
Number of extensions: 879418
Number of successful extensions: 1926
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1926
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)