>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 211     cagcaccagcaggttcatgtcgac 234
               ||||||||||||||||||||||||
Sbjct: 4170322 cagcaccagcaggttcatgtcgac 4170299

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 214     caccagcaggttcatgtcgac 234
               |||||||||||||||||||||
Sbjct: 2238434 caccagcaggttcatgtcgac 2238414

>gb|AC139217.8| Mus musculus chromosome 1, clone RP23-428E11, complete sequence
          Length = 188052

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tttctcttttcttacttcaa 36
             ||||||||||||||||||||
Sbjct: 29251 tttctcttttcttacttcaa 29270

>emb|CR381573.14| Zebrafish DNA sequence from clone DKEY-23M15 in linkage group 24,
             complete sequence
          Length = 120376

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 88133 aagaagccagcaccagcagg 88114

>gb|AC126043.3| Mus musculus BAC clone RP24-356N5 from chromosome 13, complete sequence
          Length = 140207

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 29    tacttcaacctcccaactagaaacaaaa 56
             |||||||||||||| |||||||| ||||
Sbjct: 23366 tacttcaacctccccactagaaaaaaaa 23339

>emb|CR382326.12| Zebrafish DNA sequence from clone DKEYP-50A7 in linkage group 14,
              complete sequence
          Length = 133943

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 102942 aagaagccagcaccagcagg 102923

>emb|CR376790.8| Zebrafish DNA sequence from clone DKEY-148F2 in linkage group 1, complete
              sequence
          Length = 129495

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 102166 aagaagccagcaccagcagg 102185

>gb|AC175615.3| Nomascus leucogenys leucogenys clone CH271-480C7, complete sequence
          Length = 165598

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    atccaactggaaacaataca 119
              ||||||||||||||||||||
Sbjct: 150826 atccaactggaaacaataca 150845

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    ccagcaccagcaggttcatg 229
              ||||||||||||||||||||
Sbjct: 620944 ccagcaccagcaggttcatg 620925

>gb|AC144710.2| Danio rerio clone CH211-215E4, complete sequence
          Length = 193226

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 131169 aagaagccagcaccagcagg 131188

>emb|BX465220.18| Zebrafish DNA sequence from clone CH211-226O13 in linkage group 21,
              complete sequence
          Length = 209782

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 145439 aagaagccagcaccagcagg 145420

>emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5, BAC clone F7J8 (ESSA project)
          Length = 118507

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   attgatcatgcggacttacg 144
             ||||||||||||||||||||
Sbjct: 67917 attgatcatgcggacttacg 67898

>emb|BX936382.9| Zebrafish DNA sequence from clone CH211-223A21 in linkage group 3,
             complete sequence
          Length = 162342

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   aagataaaccacttatttaa 190
             ||||||||||||||||||||
Sbjct: 65212 aagataaaccacttatttaa 65193

>emb|BX569792.15| Zebrafish DNA sequence from clone CH211-197I17 in linkage group 16,
             complete sequence
          Length = 234579

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 13763 aagaagccagcaccagcagg 13744

>emb|AL645691.20| Zebrafish DNA sequence from clone RP71-1L17 in linkage group 4 Contains
              the gene for a novel protein similar to vertebrate pim-1
              oncogene (PIM1) and two CpG islands, complete sequence
          Length = 146489

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 141590 aagaagccagcaccagcagg 141571

>emb|BX511191.4| Zebrafish DNA sequence from clone DKEY-202C5 in linkage group 8,
             complete sequence
          Length = 79887

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 50783 aagaagccagcaccagcagg 50802

>emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in linkage group 8, complete
              sequence
          Length = 216373

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 166485 aagaagccagcaccagcagg 166466

>emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 in linkage group 15,
             complete sequence
          Length = 224041

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 59922 aagaagccagcaccagcagg 59903

>emb|BX005153.13| Zebrafish DNA sequence from clone CH211-281G2 in linkage group 24,
              complete sequence
          Length = 177146

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 147687 aagaagccagcaccagcagg 147706

>emb|BX649494.6| Zebrafish DNA sequence from clone DKEY-173J18 in linkage group 16,
              complete sequence
          Length = 175187

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 165296 aagaagccagcaccagcagg 165315

>emb|AL844563.15| Zebrafish DNA sequence from clone DKEY-5O10 in linkage group 7,
             complete sequence
          Length = 227750

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 35832 aagaagccagcaccagcagg 35813

>emb|BX784393.3| Zebrafish DNA sequence from clone DKEY-126N3 in linkage group 1,
             complete sequence
          Length = 117152

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 18610 aagaagccagcaccagcagg 18591

>gb|AC114803.5| Homo sapiens BAC clone RP11-1163J22 from 2, complete sequence
          Length = 61579

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    ttcttacttcaacctcccaa 44
             ||||||||||||||||||||
Sbjct: 46204 ttcttacttcaacctcccaa 46223

>emb|BX004813.5| Zebrafish DNA sequence from clone CH211-55K22 in linkage group 8,
             complete sequence
          Length = 148955

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 55131 aagaagccagcaccagcagg 55112

>emb|BX255933.7| Zebrafish DNA sequence from clone DKEY-38L7 in linkage group 6, complete
              sequence
          Length = 231623

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 227429 aagaagccagcaccagcagg 227410

>emb|BX005141.5| Zebrafish DNA sequence from clone CH211-13K16, complete sequence
          Length = 166576

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 104336 aagaagccagcaccagcagg 104317

>emb|BX005431.3| Zebrafish DNA sequence from clone CH211-214G2 in linkage group 2,
              complete sequence
          Length = 200591

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 157125 aagaagccagcaccagcagg 157144

>emb|CR547131.7| Zebrafish DNA sequence from clone CH211-268I19 in linkage group 22,
            complete sequence
          Length = 106643

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  aagaagccagcaccagcagg 223
            ||||||||||||||||||||
Sbjct: 7958 aagaagccagcaccagcagg 7939

>emb|BX927238.7| Zebrafish DNA sequence from clone DKEY-98N4 in linkage group 19,
             complete sequence
          Length = 52866

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 49612 aagaagccagcaccagcagg 49631

>emb|AL929391.10| Zebrafish DNA sequence from clone CH211-155I14 in linkage group 20,
              complete sequence
          Length = 186458

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 174383 aagaagccagcaccagcagg 174402

>emb|BX004766.9| Zebrafish DNA sequence from clone DKEY-5P1 in linkage group 20, complete
              sequence
          Length = 214782

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 116038 aagaagccagcaccagcagg 116019

>emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in linkage group 16,
             complete sequence
          Length = 199070

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 20754 aagaagccagcaccagcagg 20735

>emb|BX005232.7| Zebrafish DNA sequence from clone CH211-172G24, complete sequence
          Length = 138158

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    aagaagccagcaccagcagg 223
              ||||||||||||||||||||
Sbjct: 133061 aagaagccagcaccagcagg 133080

>emb|CR812957.13| Zebrafish DNA sequence from clone DKEY-41L5 in linkage group 1,
             complete sequence
          Length = 220462

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 67794 aagaagccagcaccagcagg 67813

>emb|AL935292.5| Zebrafish DNA sequence from clone CH211-277P15, complete sequence
          Length = 145728

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   aagaagccagcaccagcagg 223
             ||||||||||||||||||||
Sbjct: 53754 aagaagccagcaccagcagg 53773


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,476,884
Number of Sequences: 3902068
Number of extensions: 2476884
Number of successful extensions: 48487
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48366
Number of HSP's gapped (non-prelim): 121
length of query: 248
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 226
effective length of database: 17,147,199,772
effective search space: 3875267148472
effective search space used: 3875267148472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)