ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet75c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 442 e-121
2emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diph... 178 6e-42
3emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine di... 170 1e-39
4ref|XM_482788.1| Oryza sativa (japonica cultivar-group), mRNA 131 1e-27
5ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group... 131 1e-27
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 131 1e-27
7dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic D... 131 1e-27
8dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic D... 131 1e-27
9dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 1e-27
10dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 1e-27
11gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110)... 131 1e-27
12gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5)... 131 1e-27
13dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein... 131 1e-27
14dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein... 131 1e-27
15gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promote... 119 5e-24
16gb|AY112552.1| Zea mays CL11523_1 mRNA sequence 78 2e-11
17gb|AC132227.3| Mus musculus BAC clone RP24-573O22 from chromosom... 46 0.054
18gb|AY299121.1| Xanthomonas oryzae bacteriophage Xp10 genomic DNA... 42 0.85
19gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 0.85
20emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 42 0.85
21emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chrom... 42 0.85
22gb|AC131053.2| Homo sapiens chromosome 18, clone RP11-348G23, co... 42 0.85
23gb|AC099848.2| Homo sapiens chromosome 18, clone RP11-856F24, co... 42 0.85
24gb|AC025679.4|AC025679 Homo sapiens chromosome 18, clone RP11-38... 42 0.85
25dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.85
26gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare str... 42 0.85
27dbj|AP001767.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 0.85
28emb|AJ785706.1| Zygaena laeta laeta partial mitochondrial 12S rR... 42 0.85
29gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.85
30gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 3.3
31gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, com... 40 3.3
32ref|XM_598627.2| PREDICTED: Bos taurus similar to CG6454-PB, iso... 40 3.3
33gb|AC124181.3| Mus musculus BAC clone RP23-204B12 from chromosom... 40 3.3
34gb|AY245883.1| Brassica napus NAC-domain protein 5-8 (NAC5-8) mR... 40 3.3
35gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome... 40 3.3
36gb|AC004837.1| Homo sapiens PAC clone RP4-570D2 from 7, complete... 40 3.3
37emb|AL357632.11| Human DNA sequence from clone RP11-432D22 on ch... 40 3.3
38emb|AL161440.9| Human DNA sequence from clone RP1-210G8 on chrom... 40 3.3
39gb|AC064802.4| Homo sapiens chromosome 8, clone RP11-267L5, comp... 40 3.3
40gb|AC069575.8| Homo sapiens chromosome 11, clone RP11-771G24, co... 40 3.3
41gb|AC067794.5| Homo sapiens chromosome 11, clone RP11-558L11, co... 40 3.3
42gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Can... 40 3.3
43gb|AC159639.2| Mus musculus BAC clone RP24-79M15 from chromosome... 40 3.3
44dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
45dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
46dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
47dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
48dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
49dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
50gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete... 40 3.3
51gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 3.3
52emb|AJ785711.1| Zygaena manlia piti partial mitochondrial 12S rR... 40 3.3
53emb|AJ785696.1| Zygaena cuvieri cuvieri partial mitochondrial 12... 40 3.3
54gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.3
55emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618... 40 3.3
56emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chrom... 40 3.3
57dbj|AP006367.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 3.3
58dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3 
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1
          Length = 833

 Score =  442 bits (223), Expect = e-121
 Identities = 239/243 (98%), Gaps = 1/243 (0%)
 Strand = Plus / Minus

                                                                       
Query: 17  ttgacaatcatcaaatgaaatttatatgaaaaattaaacacaacttgaaa-cagactcgg 75
           |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 814 ttgacaatcatcaaatgaaattgatatgaaaaattaaacacaacttgaaatcagactcgg 755

                                                                       
Query: 76  agttgacctcacaagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacg 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 agttgacctcacaagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacg 695

                                                                       
Query: 136 acgacctttgctgagaactgcttaattagccgctgccgctgagcacggacttgagcttct 195
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 694 acgacctttgctgagaactgcttaattagccgctgccgccgagcacggacttgagcttct 635

                                                                       
Query: 196 tcacctgcgcgtcgtccaagaaggtgaccttctcaaccacggcggatggcaggttgttgg 255
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 634 tcacctgcgcgtcgtccaagaaggtgaccttctcaacgacggcggatggcaggttgttgg 575

              
Query: 256 cga 258
           |||
Sbjct: 574 cga 572
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>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose
           pyrophosphatase (sagppase gene)
          Length = 639

 Score =  178 bits (90), Expect = 6e-42
 Identities = 96/98 (97%)
 Strand = Plus / Minus

                                                                       
Query: 161 ttagccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 220
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 580

                                                 
Query: 221 gaccttctcaaccacggcggatggcaggttgttggcga 258
           |||||||||||| |||||||||||||||||||||||||
Sbjct: 579 gaccttctcaacgacggcggatggcaggttgttggcga 542
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>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose
           pyrophosphatase
          Length = 642

 Score =  170 bits (86), Expect = 1e-39
 Identities = 95/98 (96%)
 Strand = Plus / Minus

                                                                       
Query: 161 ttagccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 220
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 583

                                                 
Query: 221 gaccttctcaaccacggcggatggcaggttgttggcga 258
           |||||||||||| |||||||| ||||||||||||||||
Sbjct: 582 gaccttctcaacgacggcggacggcaggttgttggcga 545
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>ref|XM_482788.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 938

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                       
Query: 165 ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
           ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 680

                                             
Query: 225 ttctcaaccacggcggatggcaggttgttggcga 258
           ||||| || | |||||| ||||||||||||||||
Sbjct: 679 ttctcgacgatggcggacggcaggttgttggcga 646
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>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA
          Length = 994

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                       
Query: 165 ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
           ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 669

                                             
Query: 225 ttctcaaccacggcggatggcaggttgttggcga 258
           ||||| || | |||||| ||||||||||||||||
Sbjct: 668 ttctcgacgatggcggacggcaggttgttggcga 635
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Plus

                                                                            
Query: 165      ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
                ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22551065 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 22551124

                                                  
Query: 225      ttctcaaccacggcggatggcaggttgttggcga 258
                ||||| || | |||||| ||||||||||||||||
Sbjct: 22551125 ttctcgacgatggcggacggcaggttgttggcga 22551158
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>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0690E03
          Length = 139924

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Plus

                                                                         
Query: 165   ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
             ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24566 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 24625

                                               
Query: 225   ttctcaaccacggcggatggcaggttgttggcga 258
             ||||| || | |||||| ||||||||||||||||
Sbjct: 24626 ttctcgacgatggcggacggcaggttgttggcga 24659
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>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0493A04
          Length = 149367

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Plus

                                                                          
Query: 165    ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
              ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145993 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 146052

                                                
Query: 225    ttctcaaccacggcggatggcaggttgttggcga 258
              ||||| || | |||||| ||||||||||||||||
Sbjct: 146053 ttctcgacgatggcggacggcaggttgttggcga 146086
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>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full
           insert sequence
          Length = 938

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                       
Query: 165 ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
           ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 680

                                             
Query: 225 ttctcaaccacggcggatggcaggttgttggcga 258
           ||||| || | |||||| ||||||||||||||||
Sbjct: 679 ttctcgacgatggcggacggcaggttgttggcga 646
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>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full
           insert sequence
          Length = 994

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                       
Query: 165 ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
           ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 669

                                             
Query: 225 ttctcaaccacggcggatggcaggttgttggcga 258
           ||||| || | |||||| ||||||||||||||||
Sbjct: 668 ttctcgacgatggcggacggcaggttgttggcga 635
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>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds
          Length = 1004

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                       
Query: 165 ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
           ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 661

                                             
Query: 225 ttctcaaccacggcggatggcaggttgttggcga 258
           ||||| || | |||||| ||||||||||||||||
Sbjct: 660 ttctcgacgatggcggacggcaggttgttggcga 627
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>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds
          Length = 1030

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                       
Query: 165 ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
           ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 682

                                             
Query: 225 ttctcaaccacggcggatggcaggttgttggcga 258
           ||||| || | |||||| ||||||||||||||||
Sbjct: 681 ttctcgacgatggcggacggcaggttgttggcga 648
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>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds
          Length = 642

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                       
Query: 165 ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
           ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 579

                                             
Query: 225 ttctcaaccacggcggatggcaggttgttggcga 258
           ||||| || | |||||| ||||||||||||||||
Sbjct: 578 ttctcgacgatggcggacggcaggttgttggcga 545
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>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds
          Length = 994

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                       
Query: 165 ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
           ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 681

                                             
Query: 225 ttctcaaccacggcggatggcaggttgttggcga 258
           ||||| || | |||||| ||||||||||||||||
Sbjct: 680 ttctcgacgatggcggacggcaggttgttggcga 647
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>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and
            complete cds
          Length = 2490

 Score =  119 bits (60), Expect = 5e-24
 Identities = 84/92 (91%)
 Strand = Plus / Minus

                                                                        
Query: 165  ccgctgccgctgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 224
            |||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2089 ccgctgccgccgagcacactcttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 2030

                                            
Query: 225  ttctcaaccacggcggatggcaggttgttggc 256
            ||||| || |||||||| || |||||||||||
Sbjct: 2029 ttctccacgacggcggacgggaggttgttggc 1998
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>gb|AY112552.1| Zea mays CL11523_1 mRNA sequence
          Length = 544

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 202 gcgcgtcgtccaagaaggtgaccttctcaaccacggcggatggcaggttgttggc 256
           |||||||||||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 366 gcgcgtcgtccaagaaggtgaccttctccacgacggcggacgggaggttgttggc 420
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>gb|AC132227.3| Mus musculus BAC clone RP24-573O22 from chromosome 8, complete sequence
          Length = 145732

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 28    caaatgaaatttatatgaaaaat 50
             |||||||||||||||||||||||
Sbjct: 80360 caaatgaaatttatatgaaaaat 80338
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>gb|AY299121.1| Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome
          Length = 44373

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 189   agcttcttcacctgcgcgtcg 209
             |||||||||||||||||||||
Sbjct: 10658 agcttcttcacctgcgcgtcg 10638
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>gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-144I17, complete
             sequence
          Length = 196474

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    tgaaatttatatgaaaaatta 52
             |||||||||||||||||||||
Sbjct: 63167 tgaaatttatatgaaaaatta 63187
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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 188    gagcttcttcacctgcgcgtcgtcc 212
              |||||||||||||| ||||||||||
Sbjct: 305483 gagcttcttcaccttcgcgtcgtcc 305507
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>emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chromosome 9; segment 4/5
          Length = 254050

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 34   aaatttatatgaaaaattaaa 54
            |||||||||||||||||||||
Sbjct: 2394 aaatttatatgaaaaattaaa 2414
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>gb|AC131053.2| Homo sapiens chromosome 18, clone RP11-348G23, complete sequence
          Length = 191115

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     atcaaatgaaatttatatgaa 46
              |||||||||||||||||||||
Sbjct: 148093 atcaaatgaaatttatatgaa 148113
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>gb|AC099848.2| Homo sapiens chromosome 18, clone RP11-856F24, complete sequence
          Length = 132288

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    atcaaatgaaatttatatgaa 46
             |||||||||||||||||||||
Sbjct: 82180 atcaaatgaaatttatatgaa 82200
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>gb|AC025679.4|AC025679 Homo sapiens chromosome 18, clone RP11-383C19, complete sequence
          Length = 166937

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    atcaaatgaaatttatatgaa 46
             |||||||||||||||||||||
Sbjct: 11986 atcaaatgaaatttatatgaa 11966
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 35      aatttatatgaaaaattaaac 55
               |||||||||||||||||||||
Sbjct: 8993816 aatttatatgaaaaattaaac 8993796
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>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0027A14, from chromosome 10, complete sequence
          Length = 175667

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    aatttatatgaaaaattaaac 55
             |||||||||||||||||||||
Sbjct: 82039 aatttatatgaaaaattaaac 82019
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>dbj|AP001767.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-113K21, complete
             sequence
          Length = 154312

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    aaatttatatgaaaaattaaa 54
             |||||||||||||||||||||
Sbjct: 69549 aaatttatatgaaaaattaaa 69529
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>emb|AJ785706.1| Zygaena laeta laeta partial mitochondrial 12S rRNA gene, specimen
           voucher Z002150
          Length = 606

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 34  aaatttatatgaaaaattaaa 54
           |||||||||||||||||||||
Sbjct: 251 aaatttatatgaaaaattaaa 231
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 35      aatttatatgaaaaattaaac 55
               |||||||||||||||||||||
Sbjct: 8998955 aatttatatgaaaaattaaac 8998935
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 191     cttcttcacctgcgcgtcgt 210
               ||||||||||||||||||||
Sbjct: 2254715 cttcttcacctgcgcgtcgt 2254734
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>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence
          Length = 203574

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     aaatttatatgaaaaattaa 53
              ||||||||||||||||||||
Sbjct: 173615 aaatttatatgaaaaattaa 173596
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>ref|XM_598627.2| PREDICTED: Bos taurus similar to CG6454-PB, isoform B (LOC520387),
            mRNA
          Length = 3625

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 44   gaaaaattaaacacaacttgaaac 67
            |||||||||||||||| |||||||
Sbjct: 3157 gaaaaattaaacacaaattgaaac 3134
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>gb|AC124181.3| Mus musculus BAC clone RP23-204B12 from chromosome 18, complete
             sequence
          Length = 220244

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tgaaatttatatgaaaaatt 51
             ||||||||||||||||||||
Sbjct: 91456 tgaaatttatatgaaaaatt 91475
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>gb|AY245883.1| Brassica napus NAC-domain protein 5-8 (NAC5-8) mRNA, complete cds
          Length = 1060

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   gaaatttatatgaaaaatta 52
            ||||||||||||||||||||
Sbjct: 1035 gaaatttatatgaaaaatta 1054
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>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence
          Length = 245623

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 43     tgaaaaattaaacacaacttgaaa 66
              ||||||||||||||||| ||||||
Sbjct: 225998 tgaaaaattaaacacaaattgaaa 226021
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>gb|AC004837.1| Homo sapiens PAC clone RP4-570D2 from 7, complete sequence
          Length = 135837

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    atttatatgaaaaattaaac 55
             ||||||||||||||||||||
Sbjct: 98874 atttatatgaaaaattaaac 98893
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>emb|AL357632.11| Human DNA sequence from clone RP11-432D22 on chromosome 1 Contains a
             ribosomal protein L10a (RPL10A) pseudogene, complete
             sequence
          Length = 24813

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 31    atgaaatttatatgaaaaattaaa 54
             ||||||| ||||||||||||||||
Sbjct: 12237 atgaaatatatatgaaaaattaaa 12214
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>emb|AL161440.9| Human DNA sequence from clone RP1-210G8 on chromosome 6, complete
             sequence
          Length = 81780

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tgaaaaattaaacacaactt 62
             ||||||||||||||||||||
Sbjct: 54905 tgaaaaattaaacacaactt 54886
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>gb|AC064802.4| Homo sapiens chromosome 8, clone RP11-267L5, complete sequence
          Length = 181079

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tgaaatttatatgaaaaatt 51
             ||||||||||||||||||||
Sbjct: 61273 tgaaatttatatgaaaaatt 61292
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>gb|AC069575.8| Homo sapiens chromosome 11, clone RP11-771G24, complete sequence
          Length = 173498

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     aaatgaaatttatatgaaaa 48
              ||||||||||||||||||||
Sbjct: 150668 aaatgaaatttatatgaaaa 150687
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>gb|AC067794.5| Homo sapiens chromosome 11, clone RP11-558L11, complete sequence
          Length = 190489

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    aaatgaaatttatatgaaaa 48
             ||||||||||||||||||||
Sbjct: 74409 aaatgaaatttatatgaaaa 74428
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>gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 155413

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tgaaaaattaaacacaactt 62
             ||||||||||||||||||||
Sbjct: 18496 tgaaaaattaaacacaactt 18477
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>gb|AC159639.2| Mus musculus BAC clone RP24-79M15 from chromosome 12, complete sequence
          Length = 220032

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     aatttatatgaaaaattaaa 54
              ||||||||||||||||||||
Sbjct: 119953 aatttatatgaaaaattaaa 119934
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 35      aatttatatgaaaaattaaa 54
               ||||||||||||||||||||
Sbjct: 5808452 aatttatatgaaaaattaaa 5808433
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 35       aatttatatgaaaaattaaa 54
                ||||||||||||||||||||
Sbjct: 14943786 aatttatatgaaaaattaaa 14943767
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 35      aatttatatgaaaaattaaa 54
               ||||||||||||||||||||
Sbjct: 1385104 aatttatatgaaaaattaaa 1385085
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>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0037C04
          Length = 137879

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aatttatatgaaaaattaaa 54
             ||||||||||||||||||||
Sbjct: 83155 aatttatatgaaaaattaaa 83136
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>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0014G10
          Length = 164147

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     aatttatatgaaaaattaaa 54
              ||||||||||||||||||||
Sbjct: 152125 aatttatatgaaaaattaaa 152106
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>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0701F11
          Length = 154950

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aatttatatgaaaaattaaa 54
             ||||||||||||||||||||
Sbjct: 13232 aatttatatgaaaaattaaa 13213
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>gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete sequence
          Length = 177471

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     tgaaaaattaaacacaactt 62
              ||||||||||||||||||||
Sbjct: 126735 tgaaaaattaaacacaactt 126754
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 191     cttcttcacctgcgcgtcgt 210
               ||||||||||||||||||||
Sbjct: 2421518 cttcttcacctgcgcgtcgt 2421499
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>emb|AJ785711.1| Zygaena manlia piti partial mitochondrial 12S rRNA gene, specimen
           voucher Z005333
          Length = 609

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  aatttatatgaaaaattaaa 54
           ||||||||||||||||||||
Sbjct: 250 aatttatatgaaaaattaaa 231
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>emb|AJ785696.1| Zygaena cuvieri cuvieri partial mitochondrial 12S rRNA gene,
           specimen voucher Z001850
          Length = 609

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  aatttatatgaaaaattaaa 54
           ||||||||||||||||||||
Sbjct: 250 aatttatatgaaaaattaaa 231
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 35      aatttatatgaaaaattaaa 54
               ||||||||||||||||||||
Sbjct: 5808445 aatttatatgaaaaattaaa 5808426
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>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 169662

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   aatttatatgaaaaattaaa 54
            ||||||||||||||||||||
Sbjct: 4097 aatttatatgaaaaattaaa 4078
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>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete
             sequence
          Length = 231247

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aaatttatatgaaaaattaa 53
             ||||||||||||||||||||
Sbjct: 21923 aaatttatatgaaaaattaa 21904
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>dbj|AP006367.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT35C03, TM0176b,
             complete sequence
          Length = 13417

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    tcaaatgaaatttatatgaaaaat 50
             ||||||||||||||||| ||||||
Sbjct: 11899 tcaaatgaaatttatattaaaaat 11876
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>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0044F08
          Length = 141528

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aatttatatgaaaaattaaa 54
             ||||||||||||||||||||
Sbjct: 34725 aatttatatgaaaaattaaa 34706


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,561,522
Number of Sequences: 3902068
Number of extensions: 2561522
Number of successful extensions: 60785
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60508
Number of HSP's gapped (non-prelim): 276
length of query: 258
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 236
effective length of database: 17,147,199,772
effective search space: 4046739146192
effective search space used: 4046739146192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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