>JAD1D_PANTR (Q5XUN4) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
          Length = 1535

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -2

Query: 258  DVLNQVQQFQDYVREWSDFSFLVSCLEFRIGSQPGNQLSFVERKKKMGKDRPTSLVLRRQ 79
            DVL QV+ +QD  RE              + S PG   S +ER +++G + P +  L++Q
Sbjct: 862  DVLEQVEAYQDEARE----------ALATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQ 911

Query: 78   V 76
            V
Sbjct: 912  V 912

>DBP9_SCHPO (O60080) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)|
          Length = 595

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -2

Query: 162 QPGNQLSFVERKKKMGKDRPTSL 94
           +PG  +SFV  K ++GK +PTSL
Sbjct: 422 KPGTAMSFVVPKSEVGKHKPTSL 444

>CBIO3_METMA (Q8PZN0) Putative cobalt import ATP-binding protein cbiO 3|
          Length = 453

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
 Frame = -2

Query: 258 DVLNQVQQFQ----------DYVREWSDFSFLVSCLEFRIGSQPGNQLSFVERKKKMGKD 109
           D+LN+   F           D    WSD+ FL+S  +      P       E  KK+G  
Sbjct: 180 DLLNEFNHFGSTIIISTHDVDLAYRWSDYVFLMSNSKLIGQGTPAEVFKEQELLKKVGLR 239

Query: 108 RPTSLVLRRQV 76
           +PT+L +  ++
Sbjct: 240 QPTTLEIYHEI 250


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,547,297
Number of Sequences: 219361
Number of extensions: 735085
Number of successful extensions: 2065
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)