| Clone Name | rbaet75b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 263 aagcctttgtcttgtcctgctttttagcctttttagtcttccaca 307 |||| ||| ||||||||||||| ||||||||| || |||||||| Sbjct: 18685 aagcatttatcttgtcctgcttcttagcctttccagacttccaca 18729
>gb|AC124467.3| Mus musculus BAC clone RP24-163L18 from chromosome 15, complete sequence Length = 169366 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 tcagagtaacatcacagagag 139 ||||||||||||||||||||| Sbjct: 88371 tcagagtaacatcacagagag 88391
>emb|AL353674.17| Human DNA sequence from clone RP11-162O6 on chromosome 6, complete sequence Length = 169897 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 aagcatttgccttgtccttcttgct 257 |||||||| |||||||||||||||| Sbjct: 150338 aagcatttcccttgtccttcttgct 150314
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 263 aagcctttgtcttgtcctgctttttagcctttttagtcttccaca 307 |||| ||| ||||||||||||| ||||||||| || |||||||| Sbjct: 19558786 aagcatttatcttgtcctgcttcttagcctttccagacttccaca 19558830
>gb|AC023743.4| Drosophila melanogaster X BAC RP98-40O10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185405 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 ctttgtcttgtcctgcttttt 287 ||||||||||||||||||||| Sbjct: 164914 ctttgtcttgtcctgcttttt 164894
>gb|AC023724.5| Drosophila melanogaster X BAC RP98-14B2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181974 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 ctttgtcttgtcctgcttttt 287 ||||||||||||||||||||| Sbjct: 171937 ctttgtcttgtcctgcttttt 171957
>dbj|AK105210.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-B03, full insert sequence Length = 912 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 263 aagcctttgtcttgtcctgctttttagcctttttagtcttccaca 307 |||| ||| ||||||||||||| ||||||||| || |||||||| Sbjct: 709 aagcatttatcttgtcctgcttcttagcctttccagacttccaca 665
>gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 of 74 of the complete sequence Length = 299633 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 ctttgtcttgtcctgcttttt 287 ||||||||||||||||||||| Sbjct: 281959 ctttgtcttgtcctgcttttt 281939
>emb|BX284676.8| Mouse DNA sequence from clone RP23-258L18 on chromosome X, complete sequence Length = 176762 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ctttttagcctttttagtctt 302 ||||||||||||||||||||| Sbjct: 173572 ctttttagcctttttagtctt 173552
>ref|XM_416336.1| PREDICTED: Gallus gallus similar to KIAA1549 protein (LOC418102), mRNA Length = 6557 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 agagattcagtgcattggagtgctcaga 123 ||||||||||||| ||| |||||||||| Sbjct: 4184 agagattcagtgctttgaagtgctcaga 4211
>ref|XM_761718.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_157_2280_3878) partial mRNA Length = 1599 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tgctgcttgaagcctttgtc 273 |||||||||||||||||||| Sbjct: 146 tgctgcttgaagcctttgtc 165
>gb|AY230433.1| Cochliobolus heterostrophus kinesin (KLP8) gene, complete cds Length = 5176 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gcctttttagtcttccacaaagag 312 ||||||||||||||||||| |||| Sbjct: 4656 gcctttttagtcttccacagagag 4633
>ref|XM_778084.1| PREDICTED: Strongylocentrotus purpuratus similar to Bromodomain adjacent to zinc finger domain 2B (hWALp4) (LOC577880), mRNA Length = 5637 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tgcctgaagcatttgccttg 246 |||||||||||||||||||| Sbjct: 1571 tgcctgaagcatttgccttg 1590
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 agcaggcatgcaaacagttt 198 |||||||||||||||||||| Sbjct: 3311887 agcaggcatgcaaacagttt 3311906
>gb|AC004024.4| Homo sapiens 12q24.2 PAC RP1-128M12 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 79158 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 agagtaacatcacagagagtgatg 144 |||||||||||||||| ||||||| Sbjct: 52213 agagtaacatcacagaaagtgatg 52236
>gb|AC025477.6| Homo sapiens chromosome 5 clone RP11-432A10, complete sequence Length = 154272 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cagtttttcatttactgctg 212 |||||||||||||||||||| Sbjct: 143086 cagtttttcatttactgctg 143105
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 ctttgtcttgtcctgctttt 286 |||||||||||||||||||| Sbjct: 527736 ctttgtcttgtcctgctttt 527717
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 tttttagcctttttagtctt 302 |||||||||||||||||||| Sbjct: 24845255 tttttagcctttttagtctt 24845274
>gb|AC105186.14| Homo sapiens chromosome 8, clone CTD-2323A1, complete sequence Length = 114669 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 tttcatttactgctgtggct 217 |||||||||||||||||||| Sbjct: 100334 tttcatttactgctgtggct 100353
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 tttttagcctttttagtctt 302 |||||||||||||||||||| Sbjct: 56338 tttttagcctttttagtctt 56357
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 ctttgtcttgtcctgctttt 286 |||||||||||||||||||| Sbjct: 527736 ctttgtcttgtcctgctttt 527717
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ctttgtcttgtcctgctttt 286 |||||||||||||||||||| Sbjct: 42576 ctttgtcttgtcctgctttt 42595 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,179,605 Number of Sequences: 3902068 Number of extensions: 3179605 Number of successful extensions: 59124 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59039 Number of HSP's gapped (non-prelim): 85 length of query: 335 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 313 effective length of database: 17,147,199,772 effective search space: 5367073528636 effective search space used: 5367073528636 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)