>gb|AY104299.1| Zea mays PCO075569 mRNA sequence
          Length = 2139

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 132/161 (81%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                        
Query: 132  acttacaatgatgaggggatgtgttgtttgagcagcacgtatccggagagcacggcgcgg 191
            ||||||||||| ||||||||||| ||   ||||| ||| ||||| ||||| || || |||
Sbjct: 1955 acttacaatgacgaggggatgtgctg---gagcaacacatatccagagaggacagctcgg 1899

                                                                        
Query: 192  tcgcgctctttcgccttggtctggtactgcaccctctggccatcgacccacatctcggtg 251
            |  ||||| || ||||| || ||||| |||||| ||||||| || | ||||||||| |||
Sbjct: 1898 ttccgctccttggccttcgtttggtagtgcaccttctggccgtcaagccacatctcagtg 1839

                                                     
Query: 252  accagcgtttcgccggggtagacgtgcagcaggaaccggcc 292
              || |||||| ||||||||||||||||| ||||| |||||
Sbjct: 1838 gacaacgtttccccggggtagacgtgcagaaggaaacggcc 1798

>dbj|AK071684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108B15, full
            insert sequence
          Length = 1256

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 134/166 (80%), Gaps = 3/166 (1%)
 Strand = Plus / Minus

                                                                        
Query: 130  gcacttacaatgatgaggggatgtgttgtttgagcagcacgtatccggagagcacggcgc 189
            |||||||||||||||||||||||   |||||||||| ||| ||||| || ||||||||||
Sbjct: 1041 gcacttacaatgatgaggggatg---tgtttgagcaacacatatccagaaagcacggcgc 985

                                                                        
Query: 190  ggtcgcgctctttcgccttggtctggtactgcaccctctggccatcgacccacatctcgg 249
            ||| ||| || ||  |||| || || ||  ||||||||||||| | || |||||| || |
Sbjct: 984  ggttgcgttccttgacctttgtttgataaagcaccctctggccttggagccacatttcag 925

                                                          
Query: 250  tgaccagcgtttcgccggggtagacgtgcagcaggaaccggccaaa 295
            |||| |  ||||| || || ||||| ||||| || || ||||||||
Sbjct: 924  tgactaaagtttctccaggatagacatgcagaagaaaacggccaaa 879

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 56/63 (88%), Gaps = 3/63 (4%)
 Strand = Plus / Plus

                                                                            
Query: 130      gcacttacaatgatgaggggatgtgttgtttgagcagcacgtatccggagagcacggcgc 189
                |||||||||||||||||||||||   |||||||||| ||| ||||| || ||||||||||
Sbjct: 21236823 gcacttacaatgatgaggggatg---tgtttgagcaacacatatccagaaagcacggcgc 21236879

                   
Query: 190      ggt 192
                |||
Sbjct: 21236880 ggt 21236882

>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone: P0705E11
          Length = 140729

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 56/63 (88%), Gaps = 3/63 (4%)
 Strand = Plus / Plus

                                                                          
Query: 130    gcacttacaatgatgaggggatgtgttgtttgagcagcacgtatccggagagcacggcgc 189
              |||||||||||||||||||||||   |||||||||| ||| ||||| || ||||||||||
Sbjct: 107580 gcacttacaatgatgaggggatg---tgtttgagcaacacatatccagaaagcacggcgc 107636

                 
Query: 190    ggt 192
              |||
Sbjct: 107637 ggt 107639

>ref|XM_450198.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 330

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 136 acaatgatgaggggatgtgttgtttgagcagcacgtatccggagagcacggcgcggt 192
           |||||||||||||||||   |||||||||| ||| ||||| || |||||||||||||
Sbjct: 301 acaatgatgaggggatg---tgtttgagcaacacatatccagaaagcacggcgcggt 248

>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 230    gccatcgacccacatctcggtgaccagcgtttcgccggg 268
              ||||||||||||||||||||||  |||||| ||||||||
Sbjct: 297779 gccatcgacccacatctcggtgcgcagcgtatcgccggg 297741

>gb|AC119982.6| Mus musculus chromosome 19, clone RP24-498L9, complete sequence
          Length = 177924

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 15     atatcttggcatagtttacaa 35
              |||||||||||||||||||||
Sbjct: 157927 atatcttggcatagtttacaa 157947

>gb|AC124973.8| Mus musculus strain C57BL/6J clone rp23-329l13 map 19, complete sequence
          Length = 199006

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 15     atatcttggcatagtttacaa 35
              |||||||||||||||||||||
Sbjct: 180265 atatcttggcatagtttacaa 180245

>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 236    gacccacatctcggtgaccagcgtttcgccggg 268
              ||||||||||||||||  |||||| ||||||||
Sbjct: 295862 gacccacatctcggtgcgcagcgtatcgccggg 295830

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     cgtgcagcaggaaccggcca 293
               ||||||||||||||||||||
Sbjct: 1551424 cgtgcagcaggaaccggcca 1551405

>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 237    acccacatctcggtgaccagcgtttcgccggg 268
              |||||||||||||||  |||||| ||||||||
Sbjct: 930189 acccacatctcggtgcgcagcgtgtcgccggg 930158

>emb|AL590244.5| Human DNA sequence from clone RP11-28H17 on chromosome 6 Contains  the 3'
              end of a novel gene, part of a novel gene,  a novel gene,
              cytochrome P450 pseudogene and the 3' end of the RHAG gene
              for Rhesus blood group-associated glycoprotein (RH50A),
              complete sequence
          Length = 133579

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 140    tgatgaggggatgtgttgtttgag 163
              ||||||||||||||| ||||||||
Sbjct: 114491 tgatgaggggatgtgatgtttgag 114514

>emb|AL021331.1|HS366N23 Human DNA sequence from clone RP3-366N23 on chromosome 6q27 Contains
             the UNC93A gene for unc-93 homolog A (C. elegans), the
             gene for NYD-TSPG protein,  a Mitotic Feedback Control
             Protein MADP2 Homolog LIKE pseudogene and the 3' end  of
             the TCP10 gene for t-complex 10 (mouse), complete sequence
          Length = 98517

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 127   acggcacttacaatgatgagggga 150
             |||||||||||||| |||||||||
Sbjct: 40880 acggcacttacaatcatgagggga 40903

>gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13N6 genomic sequence, complete
             sequence
          Length = 90698

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   caatagtacgtatgacacaa 127
             ||||||||||||||||||||
Sbjct: 18466 caatagtacgtatgacacaa 18485

>gb|AC004057.1|AC004057 Homo sapiens chromosome 4 clone B240N9 map 4q25, complete sequence
          Length = 152798

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    tcacagcaccaagtaggaac 98
             ||||||||||||||||||||
Sbjct: 65928 tcacagcaccaagtaggaac 65947


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,921,511
Number of Sequences: 3902068
Number of extensions: 1921511
Number of successful extensions: 36322
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36257
Number of HSP's gapped (non-prelim): 59
length of query: 317
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 295
effective length of database: 17,147,199,772
effective search space: 5058423932740
effective search space used: 5058423932740
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)