| Clone Name | rbaet74g11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 gagcaccgcgaccaggccgcc 182 ||||||||||||||||||||| Sbjct: 688774 gagcaccgcgaccaggccgcc 688754
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ctgctctcgcaacaaaatac 43 |||||||||||||||||||| Sbjct: 1653479 ctgctctcgcaacaaaatac 1653498
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gcaccgcgaccaggccgcca 183 |||||||||||||||||||| Sbjct: 59649 gcaccgcgaccaggccgcca 59668
>gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, complete sequence Length = 212775 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cacacagacggcaccaccac 125 |||||||||||||||||||| Sbjct: 167309 cacacagacggcaccaccac 167328
>gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176910 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cacacagacggcaccaccac 125 |||||||||||||||||||| Sbjct: 58990 cacacagacggcaccaccac 59009
>gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete sequence Length = 182901 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 162 gagcaccgcgaccaggccg 180 ||||||||||||||||||| Sbjct: 131595 gagcaccgcgaccaggccg 131613
>gb|AC006402.12| Drosophila melanogaster clone BACR08D17, complete sequence Length = 174735 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 162 gagcaccgcgaccaggccg 180 ||||||||||||||||||| Sbjct: 70305 gagcaccgcgaccaggccg 70323
>gb|AC183962.3| Pan troglodytes BAC clone CH251-711F5 from chromosome 6, complete sequence Length = 196547 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 148 acaaagaatgcacagagca 166 ||||||||||||||||||| Sbjct: 20640 acaaagaatgcacagagca 20622
>emb|AL137184.15| Human DNA sequence from clone RP3-401D24 on chromosome 6, complete sequence Length = 112124 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 148 acaaagaatgcacagagca 166 ||||||||||||||||||| Sbjct: 33649 acaaagaatgcacagagca 33631
>gb|AC183417.2| Pan troglodytes BAC clone CH251-173K9 from chromosome 6, complete sequence Length = 158234 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 148 acaaagaatgcacagagca 166 ||||||||||||||||||| Sbjct: 124959 acaaagaatgcacagagca 124941
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 160 cagagcaccgcgaccaggccgcc 182 |||||| |||||||||||||||| Sbjct: 1869269 cagagctccgcgaccaggccgcc 1869247
>ref|NM_136191.2| Drosophila melanogaster CG31688-RA (CG31688), mRNA Length = 3211 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 162 gagcaccgcgaccaggccg 180 ||||||||||||||||||| Sbjct: 1178 gagcaccgcgaccaggccg 1196
>gb|AC098825.3| Homo sapiens BAC clone RP11-506A18 from 4, complete sequence Length = 175758 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 aaagaatgcacagagcacc 168 ||||||||||||||||||| Sbjct: 25899 aaagaatgcacagagcacc 25917
>gb|AY075513.1| Drosophila melanogaster RE64176 full length cDNA Length = 3395 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 162 gagcaccgcgaccaggccg 180 ||||||||||||||||||| Sbjct: 1178 gagcaccgcgaccaggccg 1196
>gb|DQ088967.1| Homo sapiens calcium-sensing receptor (hypocalciuric hypercalcemia 1, severe neonatal hyperparathyroidism) (CASR) gene, complete cds Length = 106794 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 atggtaaataccttattatacac 24 ||||||| ||||||||||||||| Sbjct: 21912 atggtaagtaccttattatacac 21890
>emb|BX511232.6| Zebrafish DNA sequence from clone CH211-11K18 in linkage group 3, complete sequence Length = 171843 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 atattcacacagacggcac 119 ||||||||||||||||||| Sbjct: 18533 atattcacacagacggcac 18515
>gb|AC068630.21| Homo sapiens 3 BAC RP11-289N10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164161 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 2 atggtaaataccttattatacac 24 ||||||| ||||||||||||||| Sbjct: 2332 atggtaagtaccttattatacac 2354
>gb|AE003666.6| Drosophila melanogaster chromosome 2L, section 75 of 83 of the complete sequence Length = 318277 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 162 gagcaccgcgaccaggccg 180 ||||||||||||||||||| Sbjct: 277322 gagcaccgcgaccaggccg 277340
>dbj|AB095188.1| Cyanidioschyzon merolae gene for ribosomal protein S8, complete cds Length = 630 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 108 cacagacggcaccaccacg 126 ||||||||||||||||||| Sbjct: 393 cacagacggcaccaccacg 411
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 116 gcaccaccacgcatcacgt 134 ||||||||||||||||||| Sbjct: 1410202 gcaccaccacgcatcacgt 1410220
>emb|AL359218.4|CNS05TEG Human chromosome 14 DNA sequence BAC R-55G7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 160718 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 aaaatacaaggttgatgaattct 59 |||||||||| |||||||||||| Sbjct: 83108 aaaatacaagtttgatgaattct 83130
>dbj|AP003355.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1517D11 Length = 153728 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 ccctcaatattcacacaga 113 ||||||||||||||||||| Sbjct: 72168 ccctcaatattcacacaga 72186
>emb|AL354926.17| Human DNA sequence from clone RP1-216J23 on chromosome 6, complete sequence Length = 163140 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 148 acaaagaatgcacagagca 166 ||||||||||||||||||| Sbjct: 75147 acaaagaatgcacagagca 75129 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,271,965 Number of Sequences: 3902068 Number of extensions: 1271965 Number of successful extensions: 80452 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80228 Number of HSP's gapped (non-prelim): 224 length of query: 187 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 165 effective length of database: 17,147,199,772 effective search space: 2829287962380 effective search space used: 2829287962380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)