| Clone Name | rbaet74e10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acatgatagataaaaatcaat 77 ||||||||||||||||||||| Sbjct: 206096 acatgatagataaaaatcaat 206116
>gb|AC131752.3| Mus musculus BAC clone RP23-21D6 from chromosome 5, complete sequence Length = 203321 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acatgatagataaaaatcaat 77 ||||||||||||||||||||| Sbjct: 140852 acatgatagataaaaatcaat 140872
>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3, complete sequence Length = 114380 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cacagaagcaaagagtacac 131 |||||||||||||||||||| Sbjct: 98409 cacagaagcaaagagtacac 98390
>emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chromosome Xq24-26.2, complete sequence Length = 144177 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 atagataaaaatcaatctgt 81 |||||||||||||||||||| Sbjct: 111260 atagataaaaatcaatctgt 111241
>gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, complete sequence Length = 194718 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtgggacagacatgacac 221 |||||||||||||||||||| Sbjct: 25887 gggtgggacagacatgacac 25868
>dbj|AK163164.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730058C04 product:alpha thalassemia/mental retardation syndrome X-linked homolog (human), full insert sequence Length = 5433 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 gcacagaagcaaagagtaca 130 |||||||||||||||||||| Sbjct: 532 gcacagaagcaaagagtaca 513
>gb|AC008502.8| Homo sapiens chromosome 5 clone CTC-442G11, complete sequence Length = 123495 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aatgatggcaacctttctaa 153 |||||||||||||||||||| Sbjct: 29723 aatgatggcaacctttctaa 29704
>emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chromosome X, complete sequence Length = 181805 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gcacagaagcaaagagtaca 130 |||||||||||||||||||| Sbjct: 41141 gcacagaagcaaagagtaca 41160 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,098,853 Number of Sequences: 3902068 Number of extensions: 2098853 Number of successful extensions: 157566 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 157544 Number of HSP's gapped (non-prelim): 22 length of query: 226 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 204 effective length of database: 17,147,199,772 effective search space: 3498028753488 effective search space used: 3498028753488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)