>PSAN_HORVU (P31093) Photosystem I reaction center subunit N, chloroplast|
           precursor (PSI-N)
          Length = 145

 Score =  117 bits (294), Expect = 6e-27
 Identities = 51/51 (100%), Positives = 51/51 (100%)
 Frame = -2

Query: 290 VQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 138
           VQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW
Sbjct: 95  VQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 145

>PSAN_MAIZE (O65107) Photosystem I reaction center subunit N, chloroplast|
           precursor (PSI-N) (Fragment)
          Length = 112

 Score =  113 bits (283), Expect = 1e-25
 Identities = 48/51 (94%), Positives = 51/51 (100%)
 Frame = -2

Query: 290 VQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 138
           V+FGSC+FPYNFTGCQDLAKQKKVPFI+DDLEIECEGKEKFKCGSNVFWKW
Sbjct: 62  VEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKFKCGSNVFWKW 112

>PSAN_ARATH (P49107) Photosystem I reaction center subunit N, chloroplast|
           precursor (PSI-N)
          Length = 171

 Score =  105 bits (261), Expect = 4e-23
 Identities = 43/51 (84%), Positives = 49/51 (96%)
 Frame = -2

Query: 290 VQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 138
           VQFGSCKFP NFTGCQDLAKQKKVPFI++D+ +ECEGK+K+KCGSNVFWKW
Sbjct: 121 VQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171

>PSAN_VOLCA (Q9SBN5) Photosystem I reaction center subunit N, chloroplast|
           precursor (PSI-N)
          Length = 139

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -2

Query: 281 GSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGS 156
           G+C+FP NF GC++LA  K V +I +DL+IECEGK+   CGS
Sbjct: 91  GTCQFPENFFGCEELAFNKGVKYIAEDLKIECEGKDAKSCGS 132

>POLG_PVYN (P18247) Genome polyprotein [Contains: P1 proteinase (N-terminal|
           protein); Helper component proteinase (EC 3.4.22.45)
           (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
           inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
           (6K2); Viral gen
          Length = 3063

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = -2

Query: 284 FGS--CKFPYNFTGCQDLAKQKKVPFITD---DLEIECEGK 177
           FGS  CK PY+   C+ + K+++VP   D   DLE +   +
Sbjct: 10  FGSFECKLPYSPASCEHIVKEREVPASVDPFADLETQLSAR 50

>THIE_HAEIN (P71350) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP|
           pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate
           synthase)
          Length = 226

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 5/28 (17%)
 Frame = -2

Query: 248 CQDLAKQKKVPFITDD-----LEIECEG 180
           C+DL ++  VPFI DD     LEIE +G
Sbjct: 69  CRDLCREYGVPFIVDDNVDLALEIEADG 96

>POLG_PVYO (P22602) Genome polyprotein [Contains: P1 proteinase (N-terminal|
           protein); Helper component proteinase (EC 3.4.22.45)
           (HC-pro); Protein P3] (Fragment)
          Length = 856

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = -2

Query: 284 FGS--CKFPYNFTGCQDLAKQKKVPFITD---DLEIECEGK 177
           FGS  CK PY+   C  + K+++VP   D   DLE +   +
Sbjct: 10  FGSFECKLPYSPASCGHIVKEREVPASVDPFADLETQLSAR 50

>LIFR_RAT (O70535) Leukemia inhibitory factor receptor precursor (LIF|
           receptor) (LIF-R) (CD118 antigen)
          Length = 1093

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 173 KFKCGSNVFWKW*SWS 126
           + +C S  FWKW  WS
Sbjct: 504 RVRCSSETFWKWSKWS 519

>SYI_PROMM (Q7TUN3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 968

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 81  TSRYSLTDIHQHSPYRPASPFPE 149
           TSRY L ++H   P R A P PE
Sbjct: 690 TSRYLLGNLHDFDPERDAIPVPE 712


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,272,630
Number of Sequences: 219361
Number of extensions: 485122
Number of successful extensions: 1110
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)