| Clone Name | rbaet74d09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC020646.2|AC020646 Genomic sequence for Arabidopsis thaliana BAC T32E20 from chromosome I, complete sequence Length = 103931 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 aattgggtattaaaactccaa 91 ||||||||||||||||||||| Sbjct: 43816 aattgggtattaaaactccaa 43836
>gb|AC152495.1| Zea mays BAC clone Z486N13, complete sequence Length = 169348 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aactccaaccttccggcctg 103 |||||||||||||||||||| Sbjct: 124716 aactccaaccttccggcctg 124697
>gb|AC131303.8| Mus musculus chromosome 1, clone RP24-119O19, complete sequence Length = 187110 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gaatttctttcctatgtaca 168 |||||||||||||||||||| Sbjct: 161521 gaatttctttcctatgtaca 161540
>gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, complete sequence Length = 192016 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gaatttctttcctatgtaca 168 |||||||||||||||||||| Sbjct: 9638 gaatttctttcctatgtaca 9657
>ref|XM_323460.1| Neurospora crassa OR74A hypothetical protein ( (AL513463) probable gamma-adaptin precursor [Neurospora crassa OR74A] ) (NCU04121.1) partial mRNA Length = 2529 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gctgctgcggccggccatgc 250 |||||||||||||||||||| Sbjct: 2188 gctgctgcggccggccatgc 2207
>ref|XM_956184.1| Neurospora crassa OR74A hypothetical protein ( (AL513463) probable gamma-adaptin precursor [Neurospora crassa OR74A] ) (NCU04121.1) partial mRNA Length = 2529 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gctgctgcggccggccatgc 250 |||||||||||||||||||| Sbjct: 2188 gctgctgcggccggccatgc 2207
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 tcgaattgggtattaaaact 87 |||||||||||||||||||| Sbjct: 848538 tcgaattgggtattaaaact 848557
>emb|AL365185.11| Human DNA sequence from clone RP11-416C17 on chromosome 10 Contains part of gene FLJ11218, complete sequence Length = 150635 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tattaaaactccaaccttcc 97 |||||||||||||||||||| Sbjct: 98381 tattaaaactccaaccttcc 98362
>emb|Y10847.1|BJY10847 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL6 Length = 1238 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tgctgcagctgctgcaccgg 338 |||||||||||||||||||| Sbjct: 851 tgctgcagctgctgcaccgg 832
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tgtcgacggtgttgttcttt 226 |||||||||||||||||||| Sbjct: 2881894 tgtcgacggtgttgttcttt 2881875
>emb|AL807366.1|NC94C8 Neurospora crassa DNA linkage group V cosmid contig 94C8 Length = 80503 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gctgctgcggccggccatgc 250 |||||||||||||||||||| Sbjct: 68223 gctgctgcggccggccatgc 68242
>emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmid contig 9G6 Length = 125561 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gctgctgcggccggccatgc 250 |||||||||||||||||||| Sbjct: 121381 gctgctgcggccggccatgc 121362
>emb|AL670928.7| Mouse DNA sequence from clone RP23-459G6 on chromosome 4, complete sequence Length = 125713 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 attcggggaatttctttcct 161 |||||||||||||||||||| Sbjct: 25213 attcggggaatttctttcct 25194
>emb|BX957273.10| Zebrafish DNA sequence from clone CH211-210P17 in linkage group 9, complete sequence Length = 150430 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 atgtacacacagtatgttca 181 |||||||||||||||||||| Sbjct: 17949 atgtacacacagtatgttca 17968
>emb|AL833777.11| Mouse DNA sequence from clone RP23-150D10 on chromosome X, complete sequence Length = 189554 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 ttctttcctatgtacacaca 172 |||||||||||||||||||| Sbjct: 66109 ttctttcctatgtacacaca 66090 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,550,652 Number of Sequences: 3902068 Number of extensions: 2550652 Number of successful extensions: 65771 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65729 Number of HSP's gapped (non-prelim): 42 length of query: 338 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 316 effective length of database: 17,147,199,772 effective search space: 5418515127952 effective search space used: 5418515127952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)