ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet74a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL807375.14| Mouse DNA sequence from clone RP23-247H23 on ch... 46 0.036
2emb|BX679664.7| Human DNA sequence from clone RP11-20O24 on chro... 42 0.57
3gb|AC063960.10| Homo sapiens chromosome 10 clone RP11-105F10, co... 42 0.57
4gb|AC079246.2| Homo sapiens BAC clone CTD-2002G20 from 2, comple... 42 0.57
5ref|NM_001039150.1| Mus musculus CD44 antigen (Cd44), transcript... 40 2.2
6ref|NM_001039151.1| Mus musculus CD44 antigen (Cd44), transcript... 40 2.2
7ref|NM_009851.2| Mus musculus CD44 antigen (Cd44), transcript va... 40 2.2
8gb|AC122305.4| Mus musculus BAC clone RP23-284E19 from 9, comple... 40 2.2
9gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 2.2
10dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 2.2
11emb|AL844155.6| Mouse DNA sequence from clone RP23-163L4 on chro... 40 2.2
12dbj|AK028981.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 2.2
13gb|AC084288.9| Mus musculus Strain C57BL6/J Chromosome 2 BAC, RP... 40 2.2
14gb|AC122504.4| Mus musculus BAC clone RP24-419J13 from 9, comple... 40 2.2
15emb|AL844576.9| Mouse DNA sequence from clone RP23-233M15 on chr... 40 2.2
16gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 38 8.8
17gb|AC150888.5| Bos taurus BAC CH240-475A10 (Children's Hospital... 38 8.8
18ref|XM_865512.1| PREDICTED: Bos taurus similar to olfactory rece... 38 8.8
19ref|NM_001034030.1| Mus musculus LIM motif-containing protein ki... 38 8.8
20ref|NM_010718.3| Mus musculus LIM motif-containing protein kinas... 38 8.8
21ref|NM_173053.1| Mus musculus LIM motif-containing protein kinas... 38 8.8
22emb|CR628382.18| Zebrafish DNA sequence from clone DKEY-200C24 i... 38 8.8
23gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete ... 38 8.8
24gb|AC125477.13| Medicago truncatula clone mth2-12j8, complete se... 38 8.8
25gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete seq... 38 8.8
26emb|BX000704.26| Zebrafish DNA sequence from clone CH211-201B9 i... 38 8.8
27emb|CR589944.10| Zebrafish DNA sequence from clone CH211-14I3 in... 38 8.8
28emb|AL161672.13| Human DNA sequence from clone RP5-979D14 on chr... 38 8.8
29emb|AL161650.11| Human DNA sequence from clone RP11-421O21 on ch... 38 8.8
30emb|AL024498.13|HS417M14 Human DNA sequence from clone RP3-417M1... 38 8.8
31emb|AL671968.17| Mouse DNA sequence from clone RP23-191E3 on chr... 38 8.8
32gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 38 8.8
33emb|AL596171.1| Listeria innocua Clip11262 complete genome, segm... 38 8.8
34emb|AL591982.1| Listeria monocytogenes strain EGD, complete geno... 38 8.8
35emb|CR356241.8| Zebrafish DNA sequence from clone DKEY-90M21 in ... 38 8.8
36emb|CR385068.11| Zebrafish DNA sequence from clone CH211-245H7 i... 38 8.8
37gb|AC022538.7| Homo sapiens chromosome 10 clone RP11-420L7, comp... 38 8.8
38gb|AC105753.2| Homo sapiens chromosome 3 clone RP11-189A1, compl... 38 8.8
39dbj|AK146099.1| Mus musculus 15 days pregnant adult female place... 38 8.8
40gb|AC099775.2| Homo sapiens chromosome 3 clone RP11-169G24, comp... 38 8.8
41gb|AF269452.1|AF269452 Staphylococcus epidermidis strain SR1 clo... 38 8.8
42gb|AC099024.1| Drosophila melanogaster, chromosome 2R, region 52... 38 8.8
43gb|AC099005.1| Drosophila melanogaster, chromosome 2R, region 52... 38 8.8
44dbj|AK034900.1| Mus musculus 12 days embryo embryonic body betwe... 38 8.8
45dbj|AK038530.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 38 8.8
46emb|BX537288.7| Zebrafish DNA sequence from clone DKEY-264B2 in ... 38 8.8
47emb|AL929195.14| Zebrafish DNA sequence from clone CH211-149K12 ... 38 8.8
48dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
49dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
50gb|AC007465.4| Homo sapiens BAC clone RP11-575I21 from 2, comple... 38 8.8
51dbj|AB005140.2| Mus musculus limk2 gene for LIMK2, partial cds 38 8.8
52gb|AC090629.8| Homo sapiens 12 BAC RP11-410B16 (Roswell Park Can... 38 8.8
53emb|BX294168.12| Mouse DNA sequence from clone RP23-29M4 on chro... 38 8.8
54gb|AF270326.1|AF270326 Staphylococcus epidermidis strain SR1 clo... 38 8.8
55gb|AF269843.1|AF269843 Staphylococcus epidermidis strain SR1 clo... 38 8.8
56gb|AF269720.1|AF269720 Staphylococcus epidermidis strain SR1 clo... 38 8.8
57dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
58dbj|AK203256.1| Mus musculus cDNA, clone:Y1G0144E17, strand:plus... 38 8.8
59dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
60dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
61gb|AC002315.1|AC002315 Mouse BAC-146N21 Chromosome X contains id... 38 8.8
62emb|AL359239.4|CNS05TEQ Human chromosome 14 DNA sequence BAC R-4... 38 8.8
63emb|AL954363.27| Zebrafish DNA sequence from clone CH211-175L6 i... 38 8.8
64gb|AC150680.7| Monodelphis domestica, clone XX-28D5, complete se... 38 8.8
65gb|AC007122.1|AC007122 Drosophila melanogaster, chromosome 2R, r... 38 8.8
66gb|AE003809.3| Drosophila melanogaster chromosome 2R, section 41... 38 8.8
67emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC... 38 8.8
68gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 38 8.8
69gb|U88618.1|MMU88618 Mus musculus LIM kinase 2 mRNA, complete cds 38 8.8
70emb|BX321909.3| Mouse DNA sequence from clone RP23-443D3 on chro... 38 8.8
71gb|BC086629.1| Mus musculus cDNA clone IMAGE:6812720, containing... 38 8.8
72gb|BC007129.1| Mus musculus LIM motif-containing protein kinase ... 38 8.8
73gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete ge... 38 8.8
74gb|AC171737.2| Monodelphis domestica clone VMRC6-60O3 map human ... 38 8.8
75gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06,... 38 8.8
76emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chrom... 38 8.8
77dbj|AB005132.1| Mus musculus mRNA for LIMK2b, complete cds 38 8.8
78dbj|AB005131.1| Mus musculus mRNA for LIMK2, complete cds 38 8.8 
>emb|AL807375.14| Mouse DNA sequence from clone RP23-247H23 on chromosome X, complete
             sequence
          Length = 143779

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 65    cacaccccacaaaaacaccaaagaaaa 91
             |||||| ||||||||||||||||||||
Sbjct: 94168 cacaccacacaaaaacaccaaagaaaa 94142
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>emb|BX679664.7| Human DNA sequence from clone RP11-20O24 on chromosome 1 Contains the
             TAF13 gene for TAF13 RNA polymerase II TATA box binding
             protein (TBP)-associated factor 18kDa, a RAN member RAS
             oncogene family (RAN) pseudogene, a ribosomal protein S27
             (metallopanstimulin 1) (RPS27) pseudogene, the 5' end of a
             novel gene (KIAA0893) and three CpG islands, complete
             sequence
          Length = 107685

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    cacaaaaacaccaaagaaaaa 92
             |||||||||||||||||||||
Sbjct: 32165 cacaaaaacaccaaagaaaaa 32185
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>gb|AC063960.10| Homo sapiens chromosome 10 clone RP11-105F10, complete sequence
          Length = 174677

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     accccacaaaaacaccaaaga 88
              |||||||||||||||||||||
Sbjct: 156631 accccacaaaaacaccaaaga 156611
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>gb|AC079246.2| Homo sapiens BAC clone CTD-2002G20 from 2, complete sequence
          Length = 99940

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    cacaaaaacaccaaagaaaaa 92
             |||||||||||||||||||||
Sbjct: 65685 cacaaaaacaccaaagaaaaa 65705
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>ref|NM_001039150.1| Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA
          Length = 5054

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   acaaaaacaccaaagaaaaa 92
            ||||||||||||||||||||
Sbjct: 4981 acaaaaacaccaaagaaaaa 4962
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>ref|NM_001039151.1| Mus musculus CD44 antigen (Cd44), transcript variant 3, mRNA
          Length = 4409

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   acaaaaacaccaaagaaaaa 92
            ||||||||||||||||||||
Sbjct: 4336 acaaaaacaccaaagaaaaa 4317
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>ref|NM_009851.2| Mus musculus CD44 antigen (Cd44), transcript variant 1, mRNA
          Length = 5654

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   acaaaaacaccaaagaaaaa 92
            ||||||||||||||||||||
Sbjct: 5581 acaaaaacaccaaagaaaaa 5562
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>gb|AC122305.4| Mus musculus BAC clone RP23-284E19 from 9, complete sequence
          Length = 192434

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 73     acaaaaacaccaaagaaaaacgccaaaa 100
              |||||||||||||| ||||| |||||||
Sbjct: 175604 acaaaaacaccaaacaaaaatgccaaaa 175577
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      acaaaaacaccaaagaaaaa 92
               ||||||||||||||||||||
Sbjct: 2324283 acaaaaacaccaaagaaaaa 2324264
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 73      acaaaaacaccaaagaaaaa 92
               ||||||||||||||||||||
Sbjct: 2043700 acaaaaacaccaaagaaaaa 2043719
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>emb|AL844155.6| Mouse DNA sequence from clone RP23-163L4 on chromosome 2, complete
             sequence
          Length = 193188

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    acaaaaacaccaaagaaaaa 92
             ||||||||||||||||||||
Sbjct: 49516 acaaaaacaccaaagaaaaa 49535
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>dbj|AK028981.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732477L15 product:inferred: CD44 antigen,
            full insert sequence
          Length = 2820

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   acaaaaacaccaaagaaaaa 92
            ||||||||||||||||||||
Sbjct: 2751 acaaaaacaccaaagaaaaa 2732
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>gb|AC084288.9| Mus musculus Strain C57BL6/J Chromosome 2 BAC, RP23-108H5, complete
             sequence
          Length = 200393

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    acaaaaacaccaaagaaaaa 92
             ||||||||||||||||||||
Sbjct: 36696 acaaaaacaccaaagaaaaa 36677
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>gb|AC122504.4| Mus musculus BAC clone RP24-419J13 from 9, complete sequence
          Length = 178896

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 73     acaaaaacaccaaagaaaaacgccaaaa 100
              |||||||||||||| ||||| |||||||
Sbjct: 121115 acaaaaacaccaaacaaaaatgccaaaa 121142
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>emb|AL844576.9| Mouse DNA sequence from clone RP23-233M15 on chromosome 2, complete
              sequence
          Length = 114285

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     cacaccccacaaaaacacca 84
              ||||||||||||||||||||
Sbjct: 103468 cacaccccacaaaaacacca 103487
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     ccaaagaaaaacgccaaaa 100
              |||||||||||||||||||
Sbjct: 265058 ccaaagaaaaacgccaaaa 265076
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>gb|AC150888.5| Bos taurus  BAC CH240-475A10 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 186059

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 161    aaactaattttgcatttta 179
              |||||||||||||||||||
Sbjct: 177045 aaactaattttgcatttta 177027
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>ref|XM_865512.1| PREDICTED: Bos taurus similar to olfactory receptor Olr446
           (LOC614143), partial mRNA
          Length = 1077

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 71  ccacaaaaacaccaaagaaaaac 93
           ||||||||| |||||||||||||
Sbjct: 325 ccacaaaaagaccaaagaaaaac 303
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>ref|NM_001034030.1| Mus musculus LIM motif-containing protein kinase 2 (Limk2),
            transcript variant 3, mRNA
          Length = 3812

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 2111 cacaaaaacaccaaagaaa 2129
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>ref|NM_010718.3| Mus musculus LIM motif-containing protein kinase 2 (Limk2),
            transcript variant 1, mRNA
          Length = 4448

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 2747 cacaaaaacaccaaagaaa 2765
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>ref|NM_173053.1| Mus musculus LIM motif-containing protein kinase 2 (Limk2),
            transcript variant 2, mRNA
          Length = 4668

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 2881 cacaaaaacaccaaagaaa 2899
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>emb|CR628382.18| Zebrafish DNA sequence from clone DKEY-200C24 in linkage group 19,
              complete sequence
          Length = 156223

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 74     caaaaacaccaaagaaaaa 92
              |||||||||||||||||||
Sbjct: 112979 caaaaacaccaaagaaaaa 112997



 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 74     caaaaacaccaaagaaaaa 92
              |||||||||||||||||||
Sbjct: 105231 caaaaacaccaaagaaaaa 105249
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>gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete sequence
          Length = 131133

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 64    ccacaccccacaaaaacaccaaa 86
             |||||| ||||||||||||||||
Sbjct: 46161 ccacacaccacaaaaacaccaaa 46139
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>gb|AC125477.13| Medicago truncatula clone mth2-12j8, complete sequence
          Length = 127843

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    acaaaaacaccaaagaaaa 91
             |||||||||||||||||||
Sbjct: 54827 acaaaaacaccaaagaaaa 54809
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>gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete sequence
          Length = 165679

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    acaaaaacaccaaagaaaa 91
             |||||||||||||||||||
Sbjct: 33125 acaaaaacaccaaagaaaa 33143
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>emb|BX000704.26| Zebrafish DNA sequence from clone CH211-201B9 in linkage group 3,
             complete sequence
          Length = 191916

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    caaaaacaccaaagaaaaa 92
             |||||||||||||||||||
Sbjct: 74804 caaaaacaccaaagaaaaa 74822
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>emb|CR589944.10| Zebrafish DNA sequence from clone CH211-14I3 in linkage group 11,
             complete sequence
          Length = 157142

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    caaaaacaccaaagaaaaa 92
             |||||||||||||||||||
Sbjct: 75791 caaaaacaccaaagaaaaa 75809
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>emb|AL161672.13| Human DNA sequence from clone RP5-979D14 on chromosome 1 Contains ESTs
             and GSSs, complete sequence
          Length = 34519

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 138   ctccacacctcccccatct 156
             |||||||||||||||||||
Sbjct: 24041 ctccacacctcccccatct 24023
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>emb|AL161650.11| Human DNA sequence from clone RP11-421O21 on chromosome 10, complete
             sequence
          Length = 138807

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 160   taaactaattttgcatttt 178
             |||||||||||||||||||
Sbjct: 68622 taaactaattttgcatttt 68640
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>emb|AL024498.13|HS417M14 Human DNA sequence from clone RP3-417M14 on chromosome 6p23-25.1
             Contains a novel gene, the gene for a novel
             serine/threonine-protein kinase (possible ortholog of
             rodent MAK (male germ cell-associated kinase), the 3' end
             of the GCMB gene for glial cells missing (Drosophila)
             homolog b and a CpG island, complete sequence
          Length = 144189

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 70    cccacaaaaacaccaaagaaaaa 92
             ||||||||||||| |||||||||
Sbjct: 51314 cccacaaaaacacaaaagaaaaa 51336
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>emb|AL671968.17| Mouse DNA sequence from clone RP23-191E3 on chromosome 11 Contains four
              novel genes, an eukaryotic translation elongation factor 2
              (Eef2) pseudogene, a Finkel-Biskis-Reilly murine sarcoma
              virus (FBR-MuSV) ubiquitously expressed (Fau) pseudogene,
              the Eif4enif1 gene for eukaryotic translation initiation
              factor 4E nuclear import factor 1, the  Drg1 gene for
              developmentally regulated GTP binding protein 1, the Zfp278
              gene for zinc finger protein 278, the 3' end of the Limk2
              gene LIM motif-containing protein kinase 2 and five CpG
              islands, complete sequence
          Length = 214546

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     cacaaaaacaccaaagaaa 90
              |||||||||||||||||||
Sbjct: 211292 cacaaaaacaccaaagaaa 211274
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 89     aaaacgccaaaaggttaaa 107
              |||||||||||||||||||
Sbjct: 635540 aaaacgccaaaaggttaaa 635558
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>emb|AL596171.1| Listeria innocua Clip11262 complete genome, segment 9/12
          Length = 258650

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 75     aaaaacaccaaagaaaaac 93
              |||||||||||||||||||
Sbjct: 208013 aaaaacaccaaagaaaaac 207995
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>emb|AL591982.1| Listeria monocytogenes strain EGD, complete genome, segment 10/12
          Length = 295050

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 75     aaaaacaccaaagaaaaac 93
              |||||||||||||||||||
Sbjct: 165483 aaaaacaccaaagaaaaac 165465
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>emb|CR356241.8| Zebrafish DNA sequence from clone DKEY-90M21 in linkage group 19,
             complete sequence
          Length = 74299

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    caaaaacaccaaagaaaaa 92
             |||||||||||||||||||
Sbjct: 72713 caaaaacaccaaagaaaaa 72695



 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    caaaaacaccaaagaaaaa 92
             |||||||||||||||||||
Sbjct: 64974 caaaaacaccaaagaaaaa 64956
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>emb|CR385068.11| Zebrafish DNA sequence from clone CH211-245H7 in linkage group 19,
           complete sequence
          Length = 177489

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 74  caaaaacaccaaagaaaaa 92
           |||||||||||||||||||
Sbjct: 414 caaaaacaccaaagaaaaa 396
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>gb|AC022538.7| Homo sapiens chromosome 10 clone RP11-420L7, complete sequence
          Length = 166014

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 158   gctaaactaattttgcatt 176
             |||||||||||||||||||
Sbjct: 93542 gctaaactaattttgcatt 93524
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>gb|AC105753.2| Homo sapiens chromosome 3 clone RP11-189A1, complete sequence
          Length = 146753

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 136   tactccacacctcccccat 154
             |||||||||||||||||||
Sbjct: 21110 tactccacacctcccccat 21128
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>dbj|AK146099.1| Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN
            full-length enriched library, clone:I530029L05
            product:LIM motif-containing protein kinase 2, full
            insert sequence
          Length = 3662

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 2837 cacaaaaacaccaaagaaa 2855
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>gb|AC099775.2| Homo sapiens chromosome 3 clone RP11-169G24, complete sequence
          Length = 181443

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 136   tactccacacctcccccat 154
             |||||||||||||||||||
Sbjct: 60199 tactccacacctcccccat 60217
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>gb|AF269452.1|AF269452 Staphylococcus epidermidis strain SR1 clone step.1004a12 genomic
          sequence
          Length = 3209

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 72 cacaaaaacaccaaagaaa 90
          |||||||||||||||||||
Sbjct: 53 cacaaaaacaccaaagaaa 35
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>gb|AC099024.1| Drosophila melanogaster, chromosome 2R, region 52X-53A, BAC clone
             BACR04J01, complete sequence
          Length = 182560

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    cactccacaccccacaaaa 78
             |||||||||||||||||||
Sbjct: 91073 cactccacaccccacaaaa 91055
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>gb|AC099005.1| Drosophila melanogaster, chromosome 2R, region 52B-52C, BAC clone
              BACR11I22, complete sequence
          Length = 173165

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     cactccacaccccacaaaa 78
              |||||||||||||||||||
Sbjct: 164749 cactccacaccccacaaaa 164731
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>dbj|AK034900.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430059K01 product:LIM motif-containing protein
            kinase 2, full insert sequence
          Length = 3199

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 1412 cacaaaaacaccaaagaaa 1430
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>dbj|AK038530.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230026P20 product:LIM
           motif-containing protein kinase 2, full insert sequence
          Length = 2476

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 72  cacaaaaacaccaaagaaa 90
           |||||||||||||||||||
Sbjct: 773 cacaaaaacaccaaagaaa 791
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>emb|BX537288.7| Zebrafish DNA sequence from clone DKEY-264B2 in linkage group 2,
             complete sequence
          Length = 114103

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    caaaaacaccaaagaaaaa 92
             |||||||||||||||||||
Sbjct: 32677 caaaaacaccaaagaaaaa 32659
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>emb|AL929195.14| Zebrafish DNA sequence from clone CH211-149K12 in linkage group 16,
             complete sequence
          Length = 139679

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    caaaaacaccaaagaaaaa 92
             |||||||||||||||||||
Sbjct: 60129 caaaaacaccaaagaaaaa 60111



 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    caaaaacaccaaagaaaaa 92
             |||||||||||||||||||
Sbjct: 52690 caaaaacaccaaagaaaaa 52672
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 72       cacaaaaacaccaaagaaa 90
                |||||||||||||||||||
Sbjct: 22281713 cacaaaaacaccaaagaaa 22281695
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 46       attacatctgagtacactc 64
                |||||||||||||||||||
Sbjct: 35040740 attacatctgagtacactc 35040758
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>gb|AC007465.4| Homo sapiens BAC clone RP11-575I21 from 2, complete sequence
          Length = 170305

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    ctagaaattacatctgagt 58
             |||||||||||||||||||
Sbjct: 98206 ctagaaattacatctgagt 98224
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>dbj|AB005140.2| Mus musculus limk2 gene for LIMK2, partial cds
          Length = 11213

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    cacaaaaacaccaaagaaa 90
             |||||||||||||||||||
Sbjct: 10309 cacaaaaacaccaaagaaa 10327
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>gb|AC090629.8| Homo sapiens 12 BAC RP11-410B16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159240

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     acaccccacaaaaacacca 84
              |||||||||||||||||||
Sbjct: 132435 acaccccacaaaaacacca 132417
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>emb|BX294168.12| Mouse DNA sequence from clone RP23-29M4 on chromosome X, complete
              sequence
          Length = 225924

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 64     ccacaccccacaaaaacac 82
              |||||||||||||||||||
Sbjct: 182834 ccacaccccacaaaaacac 182816
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>gb|AF270326.1|AF270326 Staphylococcus epidermidis strain SR1 clone step.4009b08 genomic
            sequence
          Length = 2883

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 2335 cacaaaaacaccaaagaaa 2317
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>gb|AF269843.1|AF269843 Staphylococcus epidermidis strain SR1 clone step.1026c04 genomic
           sequence
          Length = 3885

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 72  cacaaaaacaccaaagaaa 90
           |||||||||||||||||||
Sbjct: 168 cacaaaaacaccaaagaaa 150
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>gb|AF269720.1|AF269720 Staphylococcus epidermidis strain SR1 clone step.1019f12 genomic
           sequence
          Length = 2631

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 72  cacaaaaacaccaaagaaa 90
           |||||||||||||||||||
Sbjct: 545 cacaaaaacaccaaagaaa 563
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>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0567H04
          Length = 181420

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    cacaaaaacaccaaagaaa 90
             |||||||||||||||||||
Sbjct: 86959 cacaaaaacaccaaagaaa 86941
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>dbj|AK203256.1| Mus musculus cDNA, clone:Y1G0144E17, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000058505, based on BLAT search
          Length = 381

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 72  cacaaaaacaccaaagaaa 90
           |||||||||||||||||||
Sbjct: 227 cacaaaaacaccaaagaaa 245
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>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643F09
          Length = 161001

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 46     attacatctgagtacactc 64
              |||||||||||||||||||
Sbjct: 101081 attacatctgagtacactc 101099
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>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    attacatctgagtacactc 64
             |||||||||||||||||||
Sbjct: 13903 attacatctgagtacactc 13921
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>gb|AC002315.1|AC002315 Mouse BAC-146N21 Chromosome X contains iduronate-2-sulfatase gene;
             complete sequence
          Length = 110079

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    ccacaccccacaaaaacac 82
             |||||||||||||||||||
Sbjct: 44012 ccacaccccacaaaaacac 44030
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>emb|AL359239.4|CNS05TEQ Human chromosome 14 DNA sequence BAC R-432I6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169985

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 161   aaactaattttgcatttta 179
             |||||||||||||||||||
Sbjct: 90651 aaactaattttgcatttta 90633
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>emb|AL954363.27| Zebrafish DNA sequence from clone CH211-175L6 in linkage group 3,
             complete sequence
          Length = 160599

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    caaaaacaccaaagaaaaa 92
             |||||||||||||||||||
Sbjct: 63552 caaaaacaccaaagaaaaa 63534
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>gb|AC150680.7| Monodelphis domestica, clone XX-28D5, complete sequence
          Length = 154058

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 75    aaaaacaccaaagaaaaac 93
             |||||||||||||||||||
Sbjct: 43246 aaaaacaccaaagaaaaac 43264
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>gb|AC007122.1|AC007122 Drosophila melanogaster, chromosome 2R, region 52C1-52C3, P1 clones
             DS00541, DS06972, and DS08188, complete sequence
          Length = 93829

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    cactccacaccccacaaaa 78
             |||||||||||||||||||
Sbjct: 33190 cactccacaccccacaaaa 33172
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>gb|AE003809.3| Drosophila melanogaster chromosome 2R, section 41 of 73 of the complete
              sequence
          Length = 262533

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     cactccacaccccacaaaa 78
              |||||||||||||||||||
Sbjct: 102641 cactccacaccccacaaaa 102623
to top
>emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
              1/6
          Length = 314150

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     ccaaagaaaaacgccaaaa 100
              |||||||||||||||||||
Sbjct: 230371 ccaaagaaaaacgccaaaa 230389
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>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 72      cacaaaaacaccaaagaaa 90
               |||||||||||||||||||
Sbjct: 1682450 cacaaaaacaccaaagaaa 1682432
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>gb|U88618.1|MMU88618 Mus musculus LIM kinase 2 mRNA, complete cds
          Length = 3447

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 2603 cacaaaaacaccaaagaaa 2621
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>emb|BX321909.3| Mouse DNA sequence from clone RP23-443D3 on chromosome 2, complete
             sequence
          Length = 82074

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 75    aaaaacaccaaagaaaaac 93
             |||||||||||||||||||
Sbjct: 67686 aaaaacaccaaagaaaaac 67704
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>gb|BC086629.1| Mus musculus cDNA clone IMAGE:6812720, containing frame-shift errors
          Length = 3670

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 2809 cacaaaaacaccaaagaaa 2827
to top
>gb|BC007129.1| Mus musculus LIM motif-containing protein kinase 2, mRNA (cDNA clone
            MGC:5783 IMAGE:3496836), complete cds
          Length = 3375

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 2693 cacaaaaacaccaaagaaa 2711
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>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 75      aaaaacaccaaagaaaaac 93
               |||||||||||||||||||
Sbjct: 2260597 aaaaacaccaaagaaaaac 2260579
to top
>gb|AC171737.2| Monodelphis domestica clone VMRC6-60O3 map human ortholog 11q13.4,
             complete sequence
          Length = 131794

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 75    aaaaacaccaaagaaaaac 93
             |||||||||||||||||||
Sbjct: 53659 aaaaacaccaaagaaaaac 53641
to top
>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence
          Length = 145603

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 160   taaactaattttgcatttt 178
             |||||||||||||||||||
Sbjct: 67578 taaactaattttgcatttt 67596
to top
>emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chromosome 2, complete
             sequence
          Length = 207571

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 137   actccacacctcccccatc 155
             |||||||||||||||||||
Sbjct: 25333 actccacacctcccccatc 25315
to top
>dbj|AB005132.1| Mus musculus mRNA for LIMK2b, complete cds
          Length = 3688

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 2865 cacaaaaacaccaaagaaa 2883
to top
>dbj|AB005131.1| Mus musculus mRNA for LIMK2, complete cds
          Length = 3426

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   cacaaaaacaccaaagaaa 90
            |||||||||||||||||||
Sbjct: 2603 cacaaaaacaccaaagaaa 2621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,766,345
Number of Sequences: 3902068
Number of extensions: 1766345
Number of successful extensions: 127761
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127420
Number of HSP's gapped (non-prelim): 341
length of query: 180
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 158
effective length of database: 17,147,199,772
effective search space: 2709257563976
effective search space used: 2709257563976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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