>gb|AC129582.10| Mus musculus chromosome 5, clone RP24-485O24, complete sequence
          Length = 184794

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      attctctatctcccttgcat 21
              ||||||||||||||||||||
Sbjct: 153025 attctctatctcccttgcat 153044

>emb|AL163279.2|HS21C079 Homo sapiens chromosome 21 segment HS21C079
          Length = 340000

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 11     ctcccttgcatatcactg 28
              ||||||||||||||||||
Sbjct: 104534 ctcccttgcatatcactg 104551

>emb|AL583849.10| Human DNA sequence from clone RP11-376F21 on chromosome 9 Contains part
             of the SHB gene for SHB SHB (Src homology 2 domain
             containing) adaptor protein B, complete sequence
          Length = 48173

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 25    actgcggccatggcgggg 42
             ||||||||||||||||||
Sbjct: 36266 actgcggccatggcgggg 36283

>emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050K3 on chromosome 20 Contains part
              of the EYA2 gene for eyes absent homolog 2 (Drosophila), a
              glyceraldehyde 3-phosphate dehydrogenase (GAPDH) pseudogene
              and an RPL27A (ribosomal protein L27A) pseudogene, complete
              sequence
          Length = 143981

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 3      ttctctatctcccttgca 20
              ||||||||||||||||||
Sbjct: 108131 ttctctatctcccttgca 108114

>gb|AE012431.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 339
            of 460 of the complete genome
          Length = 10927

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 13   cccttgcatatcactgcg 30
            ||||||||||||||||||
Sbjct: 2982 cccttgcatatcactgcg 2999

>gb|AC090213.6| Homo sapiens chromosome 18, clone RP11-760L24, complete sequence
          Length = 170907

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 4      tctctatctcccttgcatatca 25
              ||||||||||||| ||||||||
Sbjct: 148569 tctctatctccctggcatatca 148548

>gb|AC157524.2| Pan troglodytes BAC clone CH251-516K17 from chromosome unknown, complete
              sequence
          Length = 204622

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 11     ctcccttgcatatcactg 28
              ||||||||||||||||||
Sbjct: 171660 ctcccttgcatatcactg 171643

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 13      cccttgcatatcactgcg 30
               ||||||||||||||||||
Sbjct: 1221743 cccttgcatatcactgcg 1221726

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 24       cactgcggccatggcggg 41
                ||||||||||||||||||
Sbjct: 26540642 cactgcggccatggcggg 26540659

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 8        tatctcccttgcatatca 25
                ||||||||||||||||||
Sbjct: 16465999 tatctcccttgcatatca 16465982

>gb|AC155175.3| Pan troglodytes BAC clone CH251-72L14 from chromosome unknown, complete
              sequence
          Length = 171893

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 11     ctcccttgcatatcactg 28
              ||||||||||||||||||
Sbjct: 162490 ctcccttgcatatcactg 162507

>gb|AF129408.4| Homo sapiens chromosome 21 clone RP1-31K18 map q22.2, complete sequence
          Length = 141843

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 11    ctcccttgcatatcactg 28
             ||||||||||||||||||
Sbjct: 97284 ctcccttgcatatcactg 97301

>gb|AF246395.1|AF246395 Acidithiobacillus ferroxidans 3-isopropylmalate dehydratase gene,
            partial sequence
          Length = 1276

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 26   ctgcggccatggcggggc 43
            ||||||||||||||||||
Sbjct: 1023 ctgcggccatggcggggc 1006

>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0404G03
          Length = 135225

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     tatctcccttgcatatca 25
             ||||||||||||||||||
Sbjct: 75317 tatctcccttgcatatca 75300

>dbj|BS000164.1| Pan troglodytes chromosome 22 clone:RP43-027I07, map 22, complete
              sequences
          Length = 152825

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 11     ctcccttgcatatcactg 28
              ||||||||||||||||||
Sbjct: 106335 ctcccttgcatatcactg 106352

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 24       cactgcggccatggcggg 41
                ||||||||||||||||||
Sbjct: 26468811 cactgcggccatggcggg 26468828

>emb|AL713945.5|CNS07YPO Oryza sativa chromosome 12, . BAC OJ1727_H11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 85710

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 24    cactgcggccatggcggg 41
             ||||||||||||||||||
Sbjct: 10647 cactgcggccatggcggg 10664

>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 146366

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 24   cactgcggccatggcggg 41
            ||||||||||||||||||
Sbjct: 1433 cactgcggccatggcggg 1416


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 269,622
Number of Sequences: 3902068
Number of extensions: 269622
Number of successful extensions: 67248
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67108
Number of HSP's gapped (non-prelim): 140
length of query: 43
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 23
effective length of database: 17,155,003,908
effective search space: 394565089884
effective search space used: 394565089884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)