| Clone Name | rbaet73e12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... | 42 | 0.86 | 2 | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... | 40 | 3.4 | 3 | dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic D... | 40 | 3.4 |
|---|
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 gctgctgccgtgcttgccgcc 186 ||||||||||||||||||||| Sbjct: 2096291 gctgctgccgtgcttgccgcc 2096311
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcacctgatccagctgct 171 |||||||||||||||||||| Sbjct: 17076627 cttcacctgatccagctgct 17076646
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0571D04 Length = 149302 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcacctgatccagctgct 171 |||||||||||||||||||| Sbjct: 29753 cttcacctgatccagctgct 29772 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,643,613 Number of Sequences: 3902068 Number of extensions: 1643613 Number of successful extensions: 26978 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 26938 Number of HSP's gapped (non-prelim): 40 length of query: 263 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 241 effective length of database: 17,147,199,772 effective search space: 4132475145052 effective search space used: 4132475145052 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)