ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet73c08 |
|---|---|
| Clone Library Name | barley_pub |
>CP308_DROME (Q9VWR2) Probable cytochrome P450 308a1 (EC 1.14.-.-)| (CYPCCCVIIIA1) Length = 490 Score = 33.1 bits (74), Expect = 0.33 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Frame = -3 Query: 280 WFCIRMDFEPVLVPKYCRRAVEFY---CQMLSNQIPLGRCLQKEL 155 W +R D P+ P R+ + CQ+L +Q+PLGR K+L Sbjct: 126 WRVLRADLVPLFTPSRVRQTLPHVARACQLLRDQVPLGRFEAKDL 170
>AAPK1_RAT (P54645) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 548 Score = 32.3 bits (72), Expect = 0.56 Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 3/92 (3%) Frame = +2 Query: 119 IVGNRNNINTSRKFLLQTPPQRYLIRKHLTVKLNSPSAILRHQHRFKIHPNAKPHERTTT 298 I+ NR +N ++ F L T P P + L H + HP P T Sbjct: 327 IIDNRRIMNEAKDFYLATSP---------------PDSFLDDHHLTRPHPERVPFLVAET 371 Query: 299 SRCQTSAVNSHPENQYHQSV---NWTLGPAQQ 385 R + + +P+ HQ V W LG Q Sbjct: 372 PRARHTLDELNPQKSKHQGVRKAKWHLGIRSQ 403
>AAPK1_MOUSE (Q5EG47) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 548 Score = 32.3 bits (72), Expect = 0.56 Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 3/92 (3%) Frame = +2 Query: 119 IVGNRNNINTSRKFLLQTPPQRYLIRKHLTVKLNSPSAILRHQHRFKIHPNAKPHERTTT 298 I+ NR +N ++ F L T P P + L H + HP P T Sbjct: 327 IIDNRRIMNEAKDFYLATSP---------------PDSFLDDHHLTRPHPERVPFLVAET 371 Query: 299 SRCQTSAVNSHPENQYHQSV---NWTLGPAQQ 385 R + + +P+ HQ V W LG Q Sbjct: 372 PRARHTLDELNPQKSKHQGVRKAKWHLGIRSQ 403
>AAPK1_PONPY (Q5RDH5) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 550 Score = 32.3 bits (72), Expect = 0.56 Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 3/92 (3%) Frame = +2 Query: 119 IVGNRNNINTSRKFLLQTPPQRYLIRKHLTVKLNSPSAILRHQHRFKIHPNAKPHERTTT 298 I+ NR +N ++ F L T P P + L H + HP P T Sbjct: 329 IIDNRRIMNEAKDFYLATSP---------------PDSFLDDHHLTRPHPERVPFLVAET 373 Query: 299 SRCQTSAVNSHPENQYHQSV---NWTLGPAQQ 385 R + + +P+ HQ V W LG Q Sbjct: 374 PRARHTLDELNPQKSKHQGVRKAKWHLGIRSQ 405
>AAPK1_HUMAN (Q13131) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 550 Score = 32.3 bits (72), Expect = 0.56 Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 3/92 (3%) Frame = +2 Query: 119 IVGNRNNINTSRKFLLQTPPQRYLIRKHLTVKLNSPSAILRHQHRFKIHPNAKPHERTTT 298 I+ NR +N ++ F L T P P + L H + HP P T Sbjct: 329 IIDNRRIMNEAKDFYLATSP---------------PDSFLDDHHLTRPHPERVPFLVAET 373 Query: 299 SRCQTSAVNSHPENQYHQSV---NWTLGPAQQ 385 R + + +P+ HQ V W LG Q Sbjct: 374 PRARHTLDELNPQKSKHQGVRKAKWHLGIRSQ 405
>CCMF_PSEFL (P52225) Cytochrome c-type biogenesis protein cycK| Length = 660 Score = 32.3 bits (72), Expect = 0.56 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = -1 Query: 399 LSDWGCWAGPSVQFTDWWYW-------FSGWLLTALVWHLLVVVRSCGFAFGWILNLCWC 241 L W WA + + WW+W F WL+ + H L V G W + L Sbjct: 230 LGSW--WAYYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIA 287 Query: 240 RSIAEGLLSFTVRCFLIRYLWGGVC---RRNFLEVFMLFLL 127 L +F VR ++ + R F+ +F+LF++ Sbjct: 288 AFSLTLLAAFLVRSGVLTSVHAFASDPERGVFILIFLLFVV 328
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 32.0 bits (71), Expect = 0.73 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +2 Query: 239 RHQHRFKIHPNAKPHERTTTSRCQTSAVNSHPENQYHQSVNWTLGPAQQPQ-SDKQQHQW 415 +HQH+ + + H++ + Q H + Q+HQ P QQ Q + +QQHQ Sbjct: 188 QHQHQHQQQQQQQQHQQQHHQQQQQQQQQHHQQQQHHQHSQ----PQQQHQHNQQQQHQH 243 Query: 416 PQQ 424 QQ Sbjct: 244 NQQ 246
>SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor| Length = 297 Score = 32.0 bits (71), Expect = 0.73 Identities = 15/40 (37%), Positives = 17/40 (42%) Frame = +1 Query: 160 PSANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKT 279 P+ T P K KT+ P C T PT P CKT Sbjct: 106 PTCRTEPPTCKTKPPTCKTEPPTCKTEPPTCRTEPPTCKT 145 Score = 31.2 bits (69), Expect = 1.2 Identities = 14/40 (35%), Positives = 17/40 (42%) Frame = +1 Query: 160 PSANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKT 279 P+ T P K +T+ P C T PT P CKT Sbjct: 85 PTCRTEPPTCKTKPPTCRTEPPTCRTEPPTCKTKPPTCKT 124 Score = 30.4 bits (67), Expect = 2.1 Identities = 14/40 (35%), Positives = 17/40 (42%) Frame = +1 Query: 160 PSANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKT 279 P+ T P + KT+ P C T PT P CKT Sbjct: 127 PTCKTEPPTCRTEPPTCKTEPPTCRTEPPTCKTEPPTCKT 166 Score = 30.4 bits (67), Expect = 2.1 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +1 Query: 154 KVPSANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKT 279 K P+ T P + +T+ P C T PT P CKT Sbjct: 118 KPPTCKTEPPTCKTEPPTCRTEPPTCKTEPPTCRTEPPTCKT 159 Score = 30.0 bits (66), Expect = 2.8 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +1 Query: 154 KVPSANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKT 279 K P+ T P + KT+ P C T PT P C+T Sbjct: 97 KPPTCRTEPPTCRTEPPTCKTKPPTCKTEPPTCKTEPPTCRT 138 Score = 29.6 bits (65), Expect = 3.6 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +1 Query: 160 PSANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKT 279 P+ T P + +T+ P C T PT P CKT Sbjct: 134 PTCRTEPPTCKTEPPTCRTEPPTCKTEPPTCKTEPPTCKT 173 Score = 29.6 bits (65), Expect = 3.6 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +1 Query: 160 PSANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKT 279 P+ T P + KT+ P C T PT P C+T Sbjct: 113 PTCKTKPPTCKTEPPTCKTEPPTCRTEPPTCKTEPPTCRT 152 Score = 29.6 bits (65), Expect = 3.6 Identities = 14/40 (35%), Positives = 17/40 (42%) Frame = +1 Query: 160 PSANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKT 279 P+ T P + KT+ P C T PT P CKT Sbjct: 78 PTCKTEPPTCRTEPPTCKTKPPTCRTEPPTCRTEPPTCKT 117 Score = 29.3 bits (64), Expect = 4.7 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +1 Query: 160 PSANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKT 279 P+ T P + +T+ P C T PT P CKT Sbjct: 92 PTCKTKPPTCRTEPPTCRTEPPTCKTKPPTCKTEPPTCKT 131 Score = 29.3 bits (64), Expect = 4.7 Identities = 13/40 (32%), Positives = 16/40 (40%) Frame = +1 Query: 160 PSANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKT 279 P T P + KT+ P C T PT P C+T Sbjct: 64 PKCETTPPTCRTEPPTCKTEPPTCRTEPPTCKTKPPTCRT 103
>CYCA_ECOLI (P0AAE0) D-serine/D-alanine/glycine transporter| Length = 470 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -1 Query: 387 GCWAGPSVQFTDWWYWFSGWLLTALVWHLLVVVRSCGFAFGWILNLC-WCRSIAEGLLSF 211 G WAG FT W YWF W++T + VV +A W +L W S+A +L Sbjct: 96 GPWAG---YFTGWTYWFC-WVVTGMA----DVVAITAYAQFWFPDLSDWVASLAVIVLLL 147 Query: 210 TVRCFLIR 187 T+ ++ Sbjct: 148 TLNLATVK 155
>CYCA_ECO57 (P0AAE1) D-serine/D-alanine/glycine transporter| Length = 470 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -1 Query: 387 GCWAGPSVQFTDWWYWFSGWLLTALVWHLLVVVRSCGFAFGWILNLC-WCRSIAEGLLSF 211 G WAG FT W YWF W++T + VV +A W +L W S+A +L Sbjct: 96 GPWAG---YFTGWTYWFC-WVVTGMA----DVVAITAYAQFWFPDLSDWVASLAVIVLLL 147 Query: 210 TVRCFLIR 187 T+ ++ Sbjct: 148 TLNLATVK 155
>MRP2_RABIT (Q28689) Canalicular multispecific organic anion transporter 1| (ATP-binding cassette sub-family C member 2) (Multidrug resistance-associated protein 2) (Canalicular multidrug resistance protein) (Epithelial basolateral chloride conductance reg Length = 1564 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = -1 Query: 372 PSVQFTDWWYWFSGWLLTALVWHLLVVVRSCGFAFGWILNLCWCRSIAEGLLSF 211 P+V++T+ + WLL L+ H +SC W L+L W SI G F Sbjct: 97 PAVRYTNPILYLVTWLLVLLIQHSR---QSCVQKNSWFLSLFWILSILCGTFQF 147
>CCBS_OENBE (Q04648) Probable cytochrome c biosynthesis protein| Length = 577 Score = 31.2 bits (69), Expect = 1.2 Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 17/92 (18%) Frame = -1 Query: 438 PIGYYCCGHWC-----CCLSDWGCWAGPSVQFTDWWYW-------FSGWLLTALVWH--L 301 PI + WC L W WA + + WW+W F W+L H + Sbjct: 415 PIRIWILTCWCFLNVGILLGSW--WAYHELGWGGWWFWDPVENASFMPWVLATACIHSVI 472 Query: 300 LVVVRSCGFAFGWILNLCWCR---SIAEGLLS 214 L ++ SC + LC SI GLL+ Sbjct: 473 LPLLHSCTLLINIVTFLCCVLGTFSIRSGLLA 504
>LIPB2_MOUSE (O35711) Liprin-beta-2 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein binding protein 2) (PTPRF-interacting protein binding protein 2) (Coiled-coil-like protein 1) Length = 882 Score = 30.8 bits (68), Expect = 1.6 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +2 Query: 161 LLQTPPQRYLIRKHLTVKLNS 223 LL PPQ+ L+R+HLT K N+ Sbjct: 769 LLNIPPQKTLLRRHLTTKFNA 789
>LIPB2_HUMAN (Q8ND30) Liprin-beta-2 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein-binding protein 2) (PTPRF-interacting protein-binding protein 2) Length = 876 Score = 30.8 bits (68), Expect = 1.6 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +2 Query: 161 LLQTPPQRYLIRKHLTVKLNS 223 LL PPQ+ L+R+HLT K N+ Sbjct: 763 LLNIPPQKTLLRRHLTTKFNA 783
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 30.8 bits (68), Expect = 1.6 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +1 Query: 151 KKVPSANTAPKVSD*KAS--DSKTQQPFCNTSAPTQVQNPSECKTTRTNHD 297 KK P +TAP S ++ S+T NTS PT NP++ T N D Sbjct: 41 KKQPDEDTAPSTSSSQSDLFPSETDSDNGNTSIPTPTVNPTQQLPTELNVD 91
>LP61_EIMTE (P15714) Antigen LPMC-61 (Fragment)| Length = 255 Score = 30.8 bits (68), Expect = 1.6 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 338 NQYHQSVNWTLGPAQQPQSDKQQHQWPQQ 424 NQ Q W G QQ ++QQ QWP+Q Sbjct: 41 NQQLQKQQWPEGQRQQLWPEQQQQQWPEQ 69
>ECM22_YEAST (Q05958) Sterol regulatory element-binding protein ECM22| (Extracellular matrix protein 22) Length = 814 Score = 30.8 bits (68), Expect = 1.6 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 9/84 (10%) Frame = +2 Query: 200 HLTVKLNSPSAILRHQHRFKIHPNAKPHERTTTSRCQTSAVNSHPENQYHQSVNWTLGPA 379 H + +PS+++ + H P P T Q++A+N S+N L P Sbjct: 190 HNNITQTAPSSMINNNHPNMALPGNSPLSIPITPSFQSTAMN------LSSSLNGLLSPG 243 Query: 380 ---------QQPQSDKQQHQWPQQ 424 QQPQ +Q Q PQQ Sbjct: 244 RLNSVTNGLQQPQLQQQNQQIPQQ 267
>MCM1_YEAST (P11746) Pheromone receptor transcription factor (GRM/PRTF protein)| Length = 286 Score = 30.4 bits (67), Expect = 2.1 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +2 Query: 224 PSAILRHQHRFKIHPNAKPHERTTTSRCQTSAVNSHPENQYHQSVNWTLGPAQQ-PQSDK 400 P+ L+ + + ++ A P++ + + Q NS P+ Q Q P QQ Q Sbjct: 154 PAGALKQEVKSQLLGGANPNQNSMIQQQQHHTQNSQPQQQQQQQ------PQQQMSQQQM 207 Query: 401 QQHQWPQQ*YP 433 QH PQQ P Sbjct: 208 SQHPRPQQGIP 218
>CYB_TETBI (Q9B506) Cytochrome b| Length = 377 Score = 30.4 bits (67), Expect = 2.1 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%) Frame = -1 Query: 336 SGWLLTALVWHLLVVVRSCGFAFGWILNLCWCRSIAEGLLSFT--VRCFLIRYLWGG--V 169 S W + ++ L++ G+ W W ++ LLS + FL++++WGG V Sbjct: 111 STWTMGVILMFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNFLVQWVWGGFAV 170 Query: 168 CRRNFLEVFML-FLLP 124 FM+ FLLP Sbjct: 171 SNPTLTRFFMIHFLLP 186
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/77 (22%), Positives = 37/77 (48%) Frame = +2 Query: 131 RNNINTSRKFLLQTPPQRYLIRKHLTVKLNSPSAILRHQHRFKIHPNAKPHERTTTSRCQ 310 ++N+NTS + L P+R R+H + NS S+ RH+ + H + + + Sbjct: 2271 KHNLNTSEEELQSHQPKREKEREHFSSHANSSSS--RHKSKRDHHHHREKKRHSVAESTN 2328 Query: 311 TSAVNSHPENQYHQSVN 361 T ++ ++ H+ ++ Sbjct: 2329 TDEEHTPQQHNPHRRIS 2345
>TWIST_DROVI (Q9TX44) Protein twist| Length = 519 Score = 30.0 bits (66), Expect = 2.8 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +2 Query: 248 HRFKIHPNAKPHERTTTSRCQTSAVNSHPENQYHQSVNWTLGPAQQPQSDKQQHQWPQQ* 427 H + ++ + K ++ CQT A++ PE++ L QQ Q +QQ Q QQ Sbjct: 161 HGYMLNEHGKRSRSSSDYDCQTDALSMQPEHK-------KLLQQQQQQQQQQQQQQQQQL 213 Query: 428 Y 430 Y Sbjct: 214 Y 214
>DHB2_RAT (Q62730) Estradiol 17-beta-dehydrogenase 2 (EC 1.1.1.62)| (17-beta-HSD 2) (17-beta-hydroxysteroid dehydrogenase 2) Length = 381 Score = 29.6 bits (65), Expect = 3.6 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = -1 Query: 243 CRSIAEGLLSFTVRCFLIRYLWGGVCRRNFLEVFMLFLLPTM*FSSCNFIMYL 85 C++ + G L V C + LWGG C + + LFLL SC F++Y+ Sbjct: 25 CKAWSSGQLRSQVVC--LAGLWGGACLLSLSLLCSLFLLSV----SCFFLLYV 71
>YEA7_YEAST (P40002) Hypothetical 72.5 kDa protein in GCN4-WBP1 intergenic| region Length = 666 Score = 29.3 bits (64), Expect = 4.7 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 7/101 (6%) Frame = +2 Query: 137 NINTSRKFLLQTPPQRYLIRKHLTVKLNSPSAILRHQHRFKIHPNAKPHERTTTSRCQTS 316 N N++ P Y + ++ +S SA R Q + NA+P T+T+ Sbjct: 493 NNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTML 552 Query: 317 AVNSHPENQYHQS-------VNWTLGPAQQPQSDKQQHQWP 418 + ++ +QY S + + AQ P + QHQ P Sbjct: 553 SNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHP 593
>CLFA_STAAU (Q53653) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 933 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 Query: 163 SANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKTTRTN 291 S + APK D SD+KT N + QNP++ +TT+++ Sbjct: 61 SVSAAPKTDDTNVSDTKTSSN-TNNGETSVAQNPAQQETTQSS 102
>CLFA_STAAC (Q5HHM8) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 933 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 Query: 163 SANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKTTRTN 291 S + APK D SD+KT N + QNP++ +TT+++ Sbjct: 61 SVSAAPKTDDTNVSDTKTSSN-TNNGETSVAQNPAQQETTQSS 102
>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 935 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 Query: 163 SANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKTTRTN 291 S + APK D SD+KT N + QNP++ +TT+++ Sbjct: 61 SVSAAPKTDDTNVSDTKTSSN-TNNGETSVAQNPAQQETTQSS 102
>APA2_KLULA (P49348) 5',5'''-P-1,P-4-tetraphosphate phosphorylase 2 (EC| 2.7.7.53) (Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase) (AP-4-A phosphorylase) (Ap4A phosphorylase II) (AP,A phosphorylase) (ATP adenylyltransferase) Length = 331 Score = 29.3 bits (64), Expect = 4.7 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Frame = +2 Query: 98 KLQLENYIVGNRNNINTSRKFLLQT---PPQRYLIRKHLTVKLNSPSAILRHQHRFKIHP 268 KL L Y V + I ++K+LLQT P+ L L +L+ +LRH + P Sbjct: 92 KLLLNKYPVAANHLILVTKKYLLQTAPLSPKDLLTTYKLLQELDDEDEMLRHLAFYNCGP 151 Query: 269 NA 274 N+ Sbjct: 152 NS 153
>PCDGH_PANTR (Q5DRA7) Protocadherin gamma B5 precursor (PCDH-gamma-B5)| Length = 923 Score = 29.3 bits (64), Expect = 4.7 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Frame = +2 Query: 305 CQTSAVNSHPENQYHQSVNWTLGPAQQPQSDKQQH-----QWP 418 C +S SHPE Q + +W AQ+P + Q+ WP Sbjct: 788 CNSSESTSHPELQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP 830
>PCDGH_HUMAN (Q9Y5G0) Protocadherin gamma B5 precursor (PCDH-gamma-B5)| Length = 923 Score = 29.3 bits (64), Expect = 4.7 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Frame = +2 Query: 305 CQTSAVNSHPENQYHQSVNWTLGPAQQPQSDKQQH-----QWP 418 C +S SHPE Q + +W AQ+P + Q+ WP Sbjct: 788 CNSSESTSHPELQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP 830
>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 989 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 Query: 163 SANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKTTRTN 291 S + APK D SD+KT N + QNP++ +TT+++ Sbjct: 61 SVSAAPKTDDTNVSDTKTSSN-TNNGETSVAQNPAQQETTQSS 102
>CYB_OSTNU (Q8WBV2) Cytochrome b| Length = 381 Score = 29.3 bits (64), Expect = 4.7 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Frame = -1 Query: 330 WLLTALVWHLLVVVRSCGFAFGWILNLCWCRSIAEGLLSFT--VRCFLIRYLWGGVCRRN 157 W++ ++ LL+ G+ W W ++ LLS + L+ ++WGG Sbjct: 116 WMVGVIILFLLMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTMLVNWIWGG----- 170 Query: 156 FLEVFMLFLLPTM*FSSCNFIMYLIVLM 73 F + F + +FI+ I+LM Sbjct: 171 ----FAIDNATLTRFYTFHFILPFIILM 194
>CXI3_CONRA (Q7Z090) I-superfamily conotoxin R11.3| Length = 40 Score = 29.3 bits (64), Expect = 4.7 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -1 Query: 423 CCGHWCCCLSDWGCWAGPS 367 CC C WGCW+GP+ Sbjct: 22 CCFKGRCKPQSWGCWSGPT 40
>CLFA_STAAW (Q8NXJ1) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 946 Score = 28.9 bits (63), Expect = 6.2 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +1 Query: 163 SANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKTTRT 288 S + APK D SD+KT N + QNP++ +TT++ Sbjct: 61 SVSAAPKTDDTNVSDTKTSSN-TNNGETSVAQNPAQQETTQS 101
>DNJ5_CAEEL (Q09446) DnaJ homolog dnj-5 (DnaJ domain protein 5)| Length = 915 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%) Frame = -1 Query: 360 FTDWWYWFSGWLLTALVWHLLVVVRSCG------FAFGWILNLCWCRSIAEGLLSFTVRC 199 F D ++ G+ L W LL++V C FG L C+ + +L+F C Sbjct: 540 FVDVLFFVWGYACFGLQWTLLLIVEVCQKIADIFVTFGKSLWAGTCKGLRNVILAFVYLC 599 Query: 198 FLI 190 F + Sbjct: 600 FFV 602
>PTSS2_HUMAN (Q9BVG9) Phosphatidylserine synthase 2 (EC 2.7.8.-) (PtdSer| synthase 2) (PSS-2) (Serine-exchange enzyme II) Length = 487 Score = 28.9 bits (63), Expect = 6.2 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +2 Query: 155 KFLLQTPPQRYLIRKHLTVKLNSPSAILRHQHRFKIHPNAKPHER 289 KF+L PP+ YL+ L +N +R + F P KPH++ Sbjct: 335 KFVLWMPPEHYLVLLRLVFFVNVGGVAMREIYDFMDDP--KPHKK 377
>CLFA_STAAS (Q6GB45) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 928 Score = 28.9 bits (63), Expect = 6.2 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +1 Query: 163 SANTAPKVSD*KASDSKTQQPFCNTSAPTQVQNPSECKTTRT 288 S + APK D SD+KT N + QNP++ +TT++ Sbjct: 61 SVSAAPKTDDTNVSDTKTSSN-TNNGETSVAQNPAQQETTQS 101
>YN8B_YEAST (P53723) Protein YNR021W| Length = 403 Score = 28.9 bits (63), Expect = 6.2 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = +2 Query: 263 HPNAKPHERTTTSRCQTSAVNSHPENQYHQSVNWTLGPAQQPQSDK 400 HPN HE T R TS VN NQ ++ N+ L A ++DK Sbjct: 178 HPNKNAHEILTKFRFVTSIVNKEFMNQ-ARTENYFLSIAHTSENDK 222
>DSBI_SALTY (P0A1H1) Putative protein-disulfide oxidoreductase| Length = 225 Score = 28.5 bits (62), Expect = 8.1 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 6/72 (8%) Frame = -1 Query: 420 CGHWCCCLSDWGCWAGPSVQFTDWWYWFSGWLLTALVWHLLVVVRSCGFAFGWILNL--- 250 CG+ + D + F D + GW L WH + + ++C AFG L L Sbjct: 154 CGYDAPIVPDGVTLSSVQQWFVDLYQQSEGWYLLP-PWHFMNMAQACMLAFGLCLILLLV 212 Query: 249 ---CWCRSIAEG 223 W +A G Sbjct: 213 MSGAWALKLARG 224
>DSBI_SALTI (P0A1H2) Putative protein-disulfide oxidoreductase| Length = 225 Score = 28.5 bits (62), Expect = 8.1 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 6/72 (8%) Frame = -1 Query: 420 CGHWCCCLSDWGCWAGPSVQFTDWWYWFSGWLLTALVWHLLVVVRSCGFAFGWILNL--- 250 CG+ + D + F D + GW L WH + + ++C AFG L L Sbjct: 154 CGYDAPIVPDGVTLSSVQQWFVDLYQQSEGWYLLP-PWHFMNMAQACMLAFGLCLILLLV 212 Query: 249 ---CWCRSIAEG 223 W +A G Sbjct: 213 MSGAWALKLARG 224
>STP2_HUMAN (Q05952) Nuclear transition protein 2 (TP-2) (TP2)| Length = 138 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +2 Query: 257 KIHPNAKPHERTTTSRCQTSAVNSHPENQYHQSVNWTLGPA 379 ++H N++P RT T CQT + + ++ +S + + PA Sbjct: 14 QLHSNSQPQSRTCTRHCQTFSQSCRQSHRGSRSQSSSQSPA 54
>Y338_MYCGE (P47580) Hypothetical lipoprotein MG338 precursor| Length = 1271 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = +2 Query: 263 HPNAKPHERTTTSRCQTSAVNSHPENQYHQSVNWTLGPAQQPQSDKQ 403 +P+A ++T +S TS+ N +P N++ Q+ N+T G +DKQ Sbjct: 942 NPSATVSQKTKSS---TSSANENPFNRFLQNPNYTQGSEINWFNDKQ 985 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,928,239 Number of Sequences: 219361 Number of extensions: 1107676 Number of successful extensions: 4025 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 3825 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4008 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
