>ref|NM_191219.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 702

 Score =  432 bits (218), Expect = e-118
 Identities = 284/306 (92%)
 Strand = Plus / Minus

                                                                       
Query: 139 tattcttttgtctctgataggcagtggaacagggttttgagcaacatgtgggtgttctga 198
           ||||||||| ||  ||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 684 tattcttttatccttgataggcagtggaacaggtttttgagcctcatggggatgttctgc 625

                                                                       
Query: 199 tcctttgtacaccttgaggtgggtaaatagtcttctccccagcctgcccttaggaagcat 258
           ||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 624 tcccttgtacaccttgaggtgggtaaacagtcttcttcccagtctgcccttaggaagcat 565

                                                                       
Query: 259 gccacgcactgcatgttcgataattctctccggaatccttttctgaagctgatcaaaagt 318
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gccacgcactgcatgttcaataattctctccggaatccttttctgaagctgatcaaaagt 505

                                                                       
Query: 319 ttcctctttcattccaccaggacgtccagagtgccttttatagagcttttgtgaccgctt 378
           ||| ||||||||||||||||| ||||||||||||||  | |||||||| |||||||||||
Sbjct: 504 ttcttctttcattccaccaggccgtccagagtgcctcctgtagagcttctgtgaccgctt 445

                                                                       
Query: 379 tttaccagaaacagcaaccttctctgcattaaccacaataacaaaagcccccatgtccac 438
           ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 tttgccagaaacagcaaccttctctgcattaaccacaacaacaaaagcccccatgtccac 385

                 
Query: 439 acttgg 444
           ||||||
Sbjct: 384 acttgg 379

>dbj|AK119189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H01, full
           insert sequence
          Length = 1041

 Score =  432 bits (218), Expect = e-118
 Identities = 284/306 (92%)
 Strand = Plus / Minus

                                                                       
Query: 139 tattcttttgtctctgataggcagtggaacagggttttgagcaacatgtgggtgttctga 198
           ||||||||| ||  ||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 779 tattcttttatccttgataggcagtggaacaggtttttgagcctcatggggatgttctgc 720

                                                                       
Query: 199 tcctttgtacaccttgaggtgggtaaatagtcttctccccagcctgcccttaggaagcat 258
           ||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 719 tcccttgtacaccttgaggtgggtaaacagtcttcttcccagtctgcccttaggaagcat 660

                                                                       
Query: 259 gccacgcactgcatgttcgataattctctccggaatccttttctgaagctgatcaaaagt 318
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gccacgcactgcatgttcaataattctctccggaatccttttctgaagctgatcaaaagt 600

                                                                       
Query: 319 ttcctctttcattccaccaggacgtccagagtgccttttatagagcttttgtgaccgctt 378
           ||| ||||||||||||||||| ||||||||||||||  | |||||||| |||||||||||
Sbjct: 599 ttcttctttcattccaccaggccgtccagagtgcctcctgtagagcttctgtgaccgctt 540

                                                                       
Query: 379 tttaccagaaacagcaaccttctctgcattaaccacaataacaaaagcccccatgtccac 438
           ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 539 tttgccagaaacagcaaccttctctgcattaaccacaacaacaaaagcccccatgtccac 480

                 
Query: 439 acttgg 444
           ||||||
Sbjct: 479 acttgg 474

>dbj|AK104146.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D01, full
           insert sequence
          Length = 1041

 Score =  432 bits (218), Expect = e-118
 Identities = 284/306 (92%)
 Strand = Plus / Minus

                                                                       
Query: 139 tattcttttgtctctgataggcagtggaacagggttttgagcaacatgtgggtgttctga 198
           ||||||||| ||  ||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 779 tattcttttatccttgataggcagtggaacaggtttttgagcctcatggggatgttctgc 720

                                                                       
Query: 199 tcctttgtacaccttgaggtgggtaaatagtcttctccccagcctgcccttaggaagcat 258
           ||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 719 tcccttgtacaccttgaggtgggtaaacagtcttcttcccagtctgcccttaggaagcat 660

                                                                       
Query: 259 gccacgcactgcatgttcgataattctctccggaatccttttctgaagctgatcaaaagt 318
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gccacgcactgcatgttcaataattctctccggaatccttttctgaagctgatcaaaagt 600

                                                                       
Query: 319 ttcctctttcattccaccaggacgtccagagtgccttttatagagcttttgtgaccgctt 378
           ||| ||||||||||||||||| ||||||||||||||  | |||||||| |||||||||||
Sbjct: 599 ttcttctttcattccaccaggccgtccagagtgcctcctgtagagcttctgtgaccgctt 540

                                                                       
Query: 379 tttaccagaaacagcaaccttctctgcattaaccacaataacaaaagcccccatgtccac 438
           ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 539 tttgccagaaacagcaaccttctctgcattaaccacaacaacaaaagcccccatgtccac 480

                 
Query: 439 acttgg 444
           ||||||
Sbjct: 479 acttgg 474

>dbj|AK099041.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130F13, full
           insert sequence
          Length = 1017

 Score =  432 bits (218), Expect = e-118
 Identities = 284/306 (92%)
 Strand = Plus / Minus

                                                                       
Query: 139 tattcttttgtctctgataggcagtggaacagggttttgagcaacatgtgggtgttctga 198
           ||||||||| ||  ||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 767 tattcttttatccttgataggcagtggaacaggtttttgagcctcatggggatgttctgc 708

                                                                       
Query: 199 tcctttgtacaccttgaggtgggtaaatagtcttctccccagcctgcccttaggaagcat 258
           ||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 707 tcccttgtacaccttgaggtgggtaaacagtcttcttcccagtctgcccttaggaagcat 648

                                                                       
Query: 259 gccacgcactgcatgttcgataattctctccggaatccttttctgaagctgatcaaaagt 318
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gccacgcactgcatgttcaataattctctccggaatccttttctgaagctgatcaaaagt 588

                                                                       
Query: 319 ttcctctttcattccaccaggacgtccagagtgccttttatagagcttttgtgaccgctt 378
           ||| ||||||||||||||||| ||||||||||||||  | |||||||| |||||||||||
Sbjct: 587 ttcttctttcattccaccaggccgtccagagtgcctcctgtagagcttctgtgaccgctt 528

                                                                       
Query: 379 tttaccagaaacagcaaccttctctgcattaaccacaataacaaaagcccccatgtccac 438
           ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 527 tttgccagaaacagcaaccttctctgcattaaccacaacaacaaaagcccccatgtccac 468

                 
Query: 439 acttgg 444
           ||||||
Sbjct: 467 acttgg 462

>dbj|AK072760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139E02, full
           insert sequence
          Length = 1034

 Score =  432 bits (218), Expect = e-118
 Identities = 284/306 (92%)
 Strand = Plus / Minus

                                                                       
Query: 139 tattcttttgtctctgataggcagtggaacagggttttgagcaacatgtgggtgttctga 198
           ||||||||| ||  ||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 785 tattcttttatccttgataggcagtggaacaggtttttgagcctcatggggatgttctgc 726

                                                                       
Query: 199 tcctttgtacaccttgaggtgggtaaatagtcttctccccagcctgcccttaggaagcat 258
           ||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 725 tcccttgtacaccttgaggtgggtaaacagtcttcttcccagtctgcccttaggaagcat 666

                                                                       
Query: 259 gccacgcactgcatgttcgataattctctccggaatccttttctgaagctgatcaaaagt 318
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gccacgcactgcatgttcaataattctctccggaatccttttctgaagctgatcaaaagt 606

                                                                       
Query: 319 ttcctctttcattccaccaggacgtccagagtgccttttatagagcttttgtgaccgctt 378
           ||| ||||||||||||||||| ||||||||||||||  | |||||||| |||||||||||
Sbjct: 605 ttcttctttcattccaccaggccgtccagagtgcctcctgtagagcttctgtgaccgctt 546

                                                                       
Query: 379 tttaccagaaacagcaaccttctctgcattaaccacaataacaaaagcccccatgtccac 438
           ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 545 tttgccagaaacagcaaccttctctgcattaaccacaacaacaaaagcccccatgtccac 486

                 
Query: 439 acttgg 444
           ||||||
Sbjct: 485 acttgg 480

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  276 bits (139), Expect = 6e-71
 Identities = 163/171 (95%)
 Strand = Plus / Minus

                                                                            
Query: 242      ctgcccttaggaagcatgccacgcactgcatgttcgataattctctccggaatccttttc 301
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 31361832 ctgcccttaggaagcatgccacgcactgcatgttcaataattctctccggaatccttttc 31361773

                                                                            
Query: 302      tgaagctgatcaaaagtttcctctttcattccaccaggacgtccagagtgccttttatag 361
                |||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | |||
Sbjct: 31361772 tgaagctgatcaaaagtttcttctttcattccaccaggccgtccagagtgcctcctgtag 31361713

                                                                   
Query: 362      agcttttgtgaccgctttttaccagaaacagcaaccttctctgcattaacc 412
                ||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 31361712 agcttctgtgaccgctttttgccagaaacagcaaccttctctgcattaacc 31361662



 Score =  109 bits (55), Expect = 8e-21
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 139      tattcttttgtctctgataggcagtggaacagggttttgagcaacatgtgggtgttctga 198
                ||||||||| ||  ||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 31362408 tattcttttatccttgataggcagtggaacaggtttttgagcctcatggggatgttctgc 31362349

                                                           
Query: 199      tcctttgtacaccttgaggtgggtaaatagtcttctccccagc 241
                ||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 31362348 tcccttgtacaccttgaggtgggtaaacagtcttcttcccagc 31362306



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 410      accacaataacaaaagcccccatgtccacacttgg 444
                ||||||| |||||||||||||||||||||||||||
Sbjct: 31361383 accacaacaacaaaagcccccatgtccacacttgg 31361349

>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0481E12
          Length = 161563

 Score =  276 bits (139), Expect = 6e-71
 Identities = 163/171 (95%)
 Strand = Plus / Minus

                                                                          
Query: 242    ctgcccttaggaagcatgccacgcactgcatgttcgataattctctccggaatccttttc 301
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 116115 ctgcccttaggaagcatgccacgcactgcatgttcaataattctctccggaatccttttc 116056

                                                                          
Query: 302    tgaagctgatcaaaagtttcctctttcattccaccaggacgtccagagtgccttttatag 361
              |||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | |||
Sbjct: 116055 tgaagctgatcaaaagtttcttctttcattccaccaggccgtccagagtgcctcctgtag 115996

                                                                 
Query: 362    agcttttgtgaccgctttttaccagaaacagcaaccttctctgcattaacc 412
              ||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 115995 agcttctgtgaccgctttttgccagaaacagcaaccttctctgcattaacc 115945



 Score =  109 bits (55), Expect = 8e-21
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                          
Query: 139    tattcttttgtctctgataggcagtggaacagggttttgagcaacatgtgggtgttctga 198
              ||||||||| ||  ||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 116691 tattcttttatccttgataggcagtggaacaggtttttgagcctcatggggatgttctgc 116632

                                                         
Query: 199    tcctttgtacaccttgaggtgggtaaatagtcttctccccagc 241
              ||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 116631 tcccttgtacaccttgaggtgggtaaacagtcttcttcccagc 116589



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 410    accacaataacaaaagcccccatgtccacacttgg 444
              ||||||| |||||||||||||||||||||||||||
Sbjct: 115666 accacaacaacaaaagcccccatgtccacacttgg 115632

>gb|AY108259.1| Zea mays PCO074633 mRNA sequence
          Length = 1113

 Score =  270 bits (136), Expect = 4e-69
 Identities = 263/304 (86%), Gaps = 1/304 (0%)
 Strand = Plus / Minus

                                                                       
Query: 139 tattcttttgtctctgataggcagtggaacagggttttgagcaacatgtgggtgttctga 198
           ||||||||| || ||||| || ||||| ||||| ||||||||  | || || ||||||| 
Sbjct: 788 tattcttttatccctgatcgggagtgggacaggtttttgagcctcgtgcggatgttctgt 729

                                                                       
Query: 199 tcctttgtacaccttgaggtgggtaaatagtcttctccccagcctgcccttaggaagcat 258
            |||||||| ||||||||||||||||||| |||||| |||||||| ||||| || |||||
Sbjct: 728 ccctttgtataccttgaggtgggtaaataatcttcttcccagccttcccttggggagcat 669

                                                                       
Query: 259 gccacgcactgcatgttcgataattctctccggaatccttttctgaagctgatcaaaagt 318
           |||||| || |||||||| || |||||||| ||||| ||||||||||| || ||||||||
Sbjct: 668 gccacgaaccgcatgttcaatgattctctctggaattcttttctgaagttggtcaaaagt 609

                                                                       
Query: 319 ttcctctttcattccaccaggacgtccagagtgcct-tttatagagcttttgtgaccgct 377
           ||| |||||||| || ||||| | ||| ||||||||   |||| ||||||||||||||||
Sbjct: 608 ttcttctttcatccctccaggccttccggagtgcctccctataaagcttttgtgaccgct 549

                                                                       
Query: 378 ttttaccagaaacagcaaccttctctgcattaaccacaataacaaaagcccccatgtcca 437
           |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |
Sbjct: 548 ttttaccagaaacagcaaccttatctgcattgaccacaataacaaaagctcccatgtcta 489

               
Query: 438 cact 441
           ||||
Sbjct: 488 cact 485

>gb|J04461.1|SPIRPL13 Spinach chloroplast ribosomal protein L13 mRNA, complete cds
          Length = 982

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                       
Query: 248 ttaggaagcatgccacgcactgcatgttcgataattctctccggaatccttttctgaagc 307
           ||||||||||||||||| || ||||| || ||||| || |||||||| ||||||||||| 
Sbjct: 668 ttaggaagcatgccacggacagcatgctcaataatcctttccggaattcttttctgaagt 609

                                 
Query: 308 tgatcaaaagtttcctctttca 329
           || ||||| |||||||| ||||
Sbjct: 608 tggtcaaaggtttcctccttca 587



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 376 ctttttaccagaaacagcaaccttctctgcattaaccacaataacaaaagcccccatgtc 435
           ||||||||| || |||||||| || || ||||||||||| || ||||| || ||||||||
Sbjct: 540 ctttttacccgatacagcaactttatcagcattaaccacgattacaaaggctcccatgtc 481

                    
Query: 436 cacacttgg 444
            ||||||||
Sbjct: 480 aacacttgg 472

>gb|BT014432.1| Lycopersicon esculentum clone 133753R, mRNA sequence
          Length = 1344

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 383 ccagaaacagcaaccttctctgcattaaccacaataacaaaagcccccatgtccacactt 442
           ||||| ||| |||||||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 457 ccagatacaacaaccttctcagcattaaccactatgacaaatgcacccatatcaacactt 398

             
Query: 443 gg 444
           ||
Sbjct: 397 gg 396

>dbj|AK128382.1| Homo sapiens cDNA FLJ46525 fis, clone THYMU3034616
          Length = 3469

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 136  tgttattcttttgtctctgat 156
            |||||||||||||||||||||
Sbjct: 1658 tgttattcttttgtctctgat 1678

>dbj|AK123472.1| Homo sapiens cDNA FLJ41478 fis, clone BRTHA2002376
          Length = 2060

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 136 tgttattcttttgtctctgat 156
           |||||||||||||||||||||
Sbjct: 249 tgttattcttttgtctctgat 269

>gb|AC105328.13| Homo sapiens chromosome 8, clone RP11-932B15, complete sequence
          Length = 128785

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   tgttattcttttgtctctgat 156
             |||||||||||||||||||||
Sbjct: 64601 tgttattcttttgtctctgat 64621

>dbj|AP003473.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1935H12
          Length = 148498

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   tgttattcttttgtctctgat 156
             |||||||||||||||||||||
Sbjct: 91954 tgttattcttttgtctctgat 91934

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 313     aaaagtttcctctttcattccaccaggacgtcc 345
               |||||||||  |||||||||| |||||||||||
Sbjct: 1550368 aaaagtttctactttcattcctccaggacgtcc 1550400

>dbj|AP005356.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1198A4, complete
             sequence
          Length = 159758

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   tgttattcttttgtctctgat 156
             |||||||||||||||||||||
Sbjct: 42625 tgttattcttttgtctctgat 42605

>ref|XM_633305.1| Dictyostelium discoideum hypothetical protein (DDB0186185), partial
           mRNA
          Length = 1581

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 ttgttattcttttgtctctg 154
           ||||||||||||||||||||
Sbjct: 226 ttgttattcttttgtctctg 245

>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 326     ttcattccaccaggacgtcc 345
               ||||||||||||||||||||
Sbjct: 1884026 ttcattccaccaggacgtcc 1884007

>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence
          Length = 257924

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    ttttctgaagctgatcaaaa 316
              ||||||||||||||||||||
Sbjct: 212881 ttttctgaagctgatcaaaa 212862

>gb|AY548459.1| Fremyella diplosiphon clone 3098E8 30S ribosomal subunit S9, 50S
            ribosomal subunit L13, putative t-RNA pseudouridine
            synthase I, putative 50S ribosomal subunit L17, and
            putative RNA polymerase alpha subunit genes, complete cds
          Length = 3478

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 325  tttcattccaccaggacgtccaga 348
            |||||||||||||||||| |||||
Sbjct: 1309 tttcattccaccaggacggccaga 1332

>gb|AC134441.4| Mus musculus BAC clone RP24-544J6 from chromosome 5, complete sequence
          Length = 177565

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 297   ttttctgaagctgatcaaaagttt 320
             ||||||||||||||| ||||||||
Sbjct: 32106 ttttctgaagctgataaaaagttt 32083

>gb|AC131730.2| Mus musculus BAC clone RP23-115A5 from chromosome 5, complete sequence
          Length = 218708

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 297    ttttctgaagctgatcaaaagttt 320
              ||||||||||||||| ||||||||
Sbjct: 216491 ttttctgaagctgataaaaagttt 216468

>emb|Z83826.13|HS473B4 Human DNA sequence from clone RP3-473B4 on chromosome X Contains the 3'
              end of the LOC159091 gene, two novel genes, a high-mobility
              group protein pseudogene and three CpG islands, complete
              sequence
          Length = 177180

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     ctgtatctttttcaataccc 114
              ||||||||||||||||||||
Sbjct: 107698 ctgtatctttttcaataccc 107679

>emb|Z86062.1|HS121G13 Human DNA sequence from clone RP1-121G13 on chromosome 6q16 Contains
             the 3' end of the RNAH gene for an RNA helicase, the 5'
             end of the SIM1 gene for single-minded homolog 1
             (Drosophila), an RP42 homolog pseudogene a novel gene and
             three CpG islands, complete sequence
          Length = 176932

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   gcattaaccacaataacaaa 423
             ||||||||||||||||||||
Sbjct: 17555 gcattaaccacaataacaaa 17574

>gb|AE017157.1| Chlamydophila pneumoniae TW-183, section 1 of 4 of the complete genome
          Length = 300923

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 394    aaccttctctgcattaaccacaataaca 421
              |||||||||||||||||  |||||||||
Sbjct: 280626 aaccttctctgcattaataacaataaca 280653

>emb|AL137144.14| Human DNA sequence from clone RP11-210E23 on chromosome 13q31.1-32.3
             Contains the 3' end of the GPC6 gene for glypican 6,
             complete sequence
          Length = 100072

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   agagtgccttttatagagct 365
             ||||||||||||||||||||
Sbjct: 89385 agagtgccttttatagagct 89366

>emb|Y10836.1|ATHMGIY A.thaliana HMG-I/Y gene
          Length = 3219

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 133 cattgttattcttttgtctctgat 156
           ||||||||| ||||||||||||||
Sbjct: 343 cattgttatccttttgtctctgat 366

>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 394    aaccttctctgcattaaccacaataaca 421
              |||||||||||||||||  |||||||||
Sbjct: 558071 aaccttctctgcattaataacaataaca 558044

>gb|AC010736.13| Homo sapiens BAC clone RP11-436F6 from 2, complete sequence
          Length = 204267

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   tgttattcttttgtctctga 155
             ||||||||||||||||||||
Sbjct: 41500 tgttattcttttgtctctga 41481

>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 394    aaccttctctgcattaaccacaataaca 421
              |||||||||||||||||  |||||||||
Sbjct: 283212 aaccttctctgcattaataacaataaca 283239

>gb|AC006917.6|AC006917 Genomic sequence for Arabidopsis thaliana BAC F10B6 from chromosome I,
              complete sequence
          Length = 132699

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 133    cattgttattcttttgtctctgat 156
              ||||||||| ||||||||||||||
Sbjct: 109108 cattgttatccttttgtctctgat 109085

>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 394    aaccttctctgcattaaccacaataaca 421
              |||||||||||||||||  |||||||||
Sbjct: 282834 aaccttctctgcattaataacaataaca 282861

>emb|Y10986.1|AT194GE A.thaliana gene encoding hypothetical protein (194 gene)
          Length = 4900

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 133  cattgttattcttttgtctctgat 156
            ||||||||| ||||||||||||||
Sbjct: 3435 cattgttatccttttgtctctgat 3458

>gb|AC154718.2| Mus musculus BAC clone RP24-370G12 from 14, complete sequence
          Length = 182043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 311   tcaaaagtttcctctttcattcca 334
             |||| |||||||||||||||||||
Sbjct: 59546 tcaagagtttcctctttcattcca 59523

>gb|AC131739.3| Mus musculus BAC clone RP23-97B15 from 13, complete sequence
          Length = 241046

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     gttgctgtatctttttcaat 110
              ||||||||||||||||||||
Sbjct: 195055 gttgctgtatctttttcaat 195074

>emb|AL772349.5| Mouse DNA sequence from clone RP23-466A17 on chromosome 4, complete
              sequence
          Length = 196489

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    tcaatacccagggattctct 125
              ||||||||||||||||||||
Sbjct: 161798 tcaatacccagggattctct 161779


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,272,653
Number of Sequences: 3902068
Number of extensions: 4272653
Number of successful extensions: 82592
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82468
Number of HSP's gapped (non-prelim): 123
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)