ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet73c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 642 0.0
2gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 642 0.0
3gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 470 e-129
4gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 204 1e-49
5gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 204 1e-49
6gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 204 1e-49
7gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 137 3e-29
8gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 137 3e-29
9gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
10gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
11dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 121 2e-24
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
13gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 121 2e-24
14gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 121 2e-24
15dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
16dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
17dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
18dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
19dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
20gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
21dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 121 2e-24
22dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 121 2e-24
23gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 113 4e-22
24gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 113 4e-22
25gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 98 2e-17
26gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 98 2e-17
27gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 82 1e-12
28gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 82 1e-12
29gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 78 2e-11
30gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 78 2e-11
31emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 78 2e-11
32gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 56 7e-05
33gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ... 54 3e-04
34gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car... 54 3e-04
35gb|DQ123944.1| Coffea arabica x Coffea canephora clone HT-SSH2-H... 48 0.018
36emb|Y10657.1|CLRCAGENE C.littorale rca gene 48 0.018
37gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosom... 42 1.1
38ref|XM_974982.1| PREDICTED: Mus musculus desmoplakin (Dsp), mRNA 42 1.1
39ref|XM_912083.2| PREDICTED: Mus musculus desmoplakin, transcript... 42 1.1
40ref|XM_621314.3| PREDICTED: Mus musculus desmoplakin, transcript... 42 1.1
41gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, compl... 42 1.1
42dbj|AK009006.1| Mus musculus adult male tongue cDNA, RIKEN full-... 42 1.1
43gb|BC033467.1| Mus musculus desmoplakin, mRNA (cDNA clone IMAGE:... 42 1.1
44gb|BC033474.1| Homo sapiens renin, mRNA (cDNA clone MGC:34221 IM... 40 4.4
45gb|AY664490.1| Macaca fascicularis renin (REN) mRNA, complete cds 40 4.4
46gb|BC047752.1| Homo sapiens renin, mRNA (cDNA clone MGC:54147 IM... 40 4.4
47gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence 40 4.4
48gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, com... 40 4.4
49ref|NM_001032916.1| Macaca mulatta prorenin (REN), mRNA 40 4.4
50ref|XM_743857.1| Aspergillus fumigatus Af293 hypothetical protei... 40 4.4
51gb|L00071.1|HUMREN08 Human renin gene, exon 8 40 4.4
52gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, comple... 40 4.4
53ref|NM_000537.2| Homo sapiens renin (REN), mRNA 40 4.4
54emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chro... 40 4.4
55emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in l... 40 4.4
56emb|X00063.1|HSRENK Human kidney mRNA fragment for renin (aa 105... 40 4.4
57emb|CR926484.1| Pongo pygmaeus mRNA; cDNA DKFZp469I191 (from clo... 40 4.4
58emb|CR536498.1| Homo sapiens full open reading frame cDNA clone ... 40 4.4
59gb|AY436324.1| Homo sapiens renin (REN) gene, complete cds 40 4.4
60emb|AJ132342.1|CJA132342 Callithrix jacchus mRNA for preprorenin 40 4.4
61emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on ch... 40 4.4
62emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph... 40 4.4
63gb|M10151.1|HUMRENA4 Homo sapiens renin (REN) gene, exons 6, 7, ... 40 4.4
64gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, com... 40 4.4
65gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.4
66gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosom... 40 4.4
67gb|AF193454.1|F193446S09 Pan troglodytes renin (REN) gene, exon 8 40 4.4
68gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, comple... 40 4.4
69ref|NM_001009122.1| Pan troglodytes renin (REN), mRNA 40 4.4
70gb|AY662332.2| Macaca mulatta prorenin (REN) mRNA, complete cds 40 4.4
71emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 i... 40 4.4
72gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, comple... 40 4.4
73gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso... 40 4.4
74emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chro... 40 4.4 
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  642 bits (324), Expect = 0.0
 Identities = 333/336 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaatcaaaaagtttgagtggatttcgggtccaaaatagtccaacatatatatagtgcatg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4130 gaatcaaaaagtttgagtggatttcgggtccaaaatagtccaacatatatatagtgcatg 4071

                                                                        
Query: 61   catgcatcttaagtagagtaggaccttctacttgccgtagaaggcaccggtcttcatggc 120
            |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4070 catcgatcttaagtagagtaggaccttctacttgccgtagaaggcaccggtcttcatggc 4011

                                                                        
Query: 121  gtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4010 gtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacg 3951

                                                                        
Query: 181  cttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctctatggt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3950 cttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctctatggt 3891

                                                                        
Query: 241  catcttgggctggtcgaacgtgggcggcccctccctggagttgacgaggcgcttggagat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3890 catcttgggctggtcgaacgtgggcggcccctccctggagttgacgaggcgcttggagat 3831

                                                
Query: 301  gttctccacgccgatctcgccgacccatttgcgcac 336
            ||||||||||||||||||||||||||| ||||||||
Sbjct: 3830 gttctccacgccgatctcgccgacccacttgcgcac 3795



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 170  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 7229 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 7170

                                         
Query: 230  ttctctatggtcatcttgggctggtcgaa 258
            ||||| |  |||||||| ||||| |||||
Sbjct: 7169 ttctcgactgtcatctttggctgctcgaa 7141
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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  642 bits (324), Expect = 0.0
 Identities = 333/336 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaatcaaaaagtttgagtggatttcgggtccaaaatagtccaacatatatatagtgcatg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gaatcaaaaagtttgagtggatttcgggtccaaaatagtccaacatatatatagtgcatg 1502

                                                                        
Query: 61   catgcatcttaagtagagtaggaccttctacttgccgtagaaggcaccggtcttcatggc 120
            |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 catcgatcttaagtagagtaggaccttctacttgccgtagaaggcaccggtcttcatggc 1442

                                                                        
Query: 121  gtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacg 1382

                                                                        
Query: 181  cttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctctatggt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctctatggt 1322

                                                                        
Query: 241  catcttgggctggtcgaacgtgggcggcccctccctggagttgacgaggcgcttggagat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 catcttgggctggtcgaacgtgggcggcccctccctggagttgacgaggcgcttggagat 1262

                                                
Query: 301  gttctccacgccgatctcgccgacccatttgcgcac 336
            ||||||||||||||||||||||||||| ||||||||
Sbjct: 1261 gttctccacgccgatctcgccgacccacttgcgcac 1226
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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  470 bits (237), Expect = e-129
 Identities = 318/344 (92%), Gaps = 12/344 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaatcaaaaagtttgagtggatttcgggtccaaaatagtccaacatatatatagtgcatg 60
            ||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||
Sbjct: 1415 gaatcaaaaagtttgagtggatt-cgagtccaaaatattccagcatatatatagtgcatg 1357

                                                                        
Query: 61   catgca--------tcttaagtagagtaggaccttctacttgccgtagaaggcaccggtc 112
            ||||||        |||||||||   |||||| |||||||||||||||||||| ||||||
Sbjct: 1356 catgcacgcatgcatcttaagta---taggactttctacttgccgtagaaggcgccggtc 1300

                                                                        
Query: 113  ttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagc 172
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 gccatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagc 1240

                                                                        
Query: 173  tgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttc 232
            ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 tgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagcttc 1180

                                                                        
Query: 233  tctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgaggcgc 292
            || |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 1179 tcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagccgc 1120

                                                        
Query: 293  ttggagatgttctccacgccgatctcgccgacccatttgcgcac 336
            |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1119 ttggagatgttctcgacgccgatctcgccgacccacttgcgcac 1076
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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  204 bits (103), Expect = 1e-49
 Identities = 184/211 (87%)
 Strand = Plus / Minus

                                                                       
Query: 110 gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 169
           |||||||||||||| ||||||||||  || || || |||||| ||||||||||||| || 
Sbjct: 908 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 849

                                                                       
Query: 170 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
           ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||
Sbjct: 848 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 789

                                                                       
Query: 230 ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgagg 289
           ||||| || || ||||||||||| |||||||||||||| |||||| ||||||||||||| 
Sbjct: 788 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 729

                                          
Query: 290 cgcttggagatgttctccacgccgatctcgc 320
             | ||| ||||||||| |||||| ||||||
Sbjct: 728 ttcctggcgatgttctcgacgccggtctcgc 698
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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  204 bits (103), Expect = 1e-49
 Identities = 184/211 (87%)
 Strand = Plus / Minus

                                                                        
Query: 110  gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 169
            |||||||||||||| ||||||||||  || || || |||||| ||||||||||||| || 
Sbjct: 1303 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 1244

                                                                        
Query: 170  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
            ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||
Sbjct: 1243 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 1184

                                                                        
Query: 230  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgagg 289
            ||||| || || ||||||||||| |||||||||||||| |||||| ||||||||||||| 
Sbjct: 1183 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 1124

                                           
Query: 290  cgcttggagatgttctccacgccgatctcgc 320
              | ||| ||||||||| |||||| ||||||
Sbjct: 1123 ttcctggcgatgttctcgacgccggtctcgc 1093
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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  204 bits (103), Expect = 1e-49
 Identities = 184/211 (87%)
 Strand = Plus / Minus

                                                                        
Query: 110  gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 169
            |||||||||||||| ||||||||||  || || || |||||| ||||||||||||| || 
Sbjct: 1303 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 1244

                                                                        
Query: 170  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
            ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||
Sbjct: 1243 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 1184

                                                                        
Query: 230  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgagg 289
            ||||| || || ||||||||||| |||||||||||||| |||||| ||||||||||||| 
Sbjct: 1183 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 1124

                                           
Query: 290  cgcttggagatgttctccacgccgatctcgc 320
              | ||| ||||||||| |||||| ||||||
Sbjct: 1123 ttcctggcgatgttctcgacgccggtctcgc 1093
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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  137 bits (69), Expect = 3e-29
 Identities = 114/129 (88%)
 Strand = Plus / Minus

                                                                       
Query: 146 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 205
           |||||||| |||||||||||||| |||||||| | ||| ||||||||||||||||| |||
Sbjct: 952 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcacc 893

                                                                       
Query: 206 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 265
           ||||||| |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 892 agcatgttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 833

                    
Query: 266 ggcccctcc 274
           |||||||||
Sbjct: 832 ggcccctcc 824
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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  137 bits (69), Expect = 3e-29
 Identities = 114/129 (88%)
 Strand = Plus / Minus

                                                                        
Query: 146  gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 205
            |||||||| |||||||||||||| |||||||| | ||| ||||||||||||||||| |||
Sbjct: 1146 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcacc 1087

                                                                        
Query: 206  agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 265
            ||||||| |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 1086 agcatgttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 1027

                     
Query: 266  ggcccctcc 274
            |||||||||
Sbjct: 1026 ggcccctcc 1018
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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Plus

                                                                          
Query: 95     ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
              |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 108311 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 108370

                                                                          
Query: 155    aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
              | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 108371 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 108430

                                                           
Query: 215    ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
              ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 108431 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 108475



 Score =  109 bits (55), Expect = 6e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                          
Query: 137    ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 196
              |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 112186 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 112245

                                                                          
Query: 197    tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 252
              |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 112246 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 112305
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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Plus

                                                                         
Query: 95    ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
             |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 30188 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 30247

                                                                         
Query: 155   aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
             | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 30248 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 30307

                                                          
Query: 215   ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
             ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 30308 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 30352



 Score =  109 bits (55), Expect = 6e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                         
Query: 137   ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 196
             |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 34063 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 34122

                                                                         
Query: 197   tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 252
             |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 34123 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 34182
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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250

                                                                        
Query: 155  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190

                                                         
Query: 215  ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
            ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 1145
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Plus

                                                                            
Query: 95       ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
                |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 28303450 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 28303509

                                                                            
Query: 155      aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
                | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 28303510 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 28303569

                                                             
Query: 215      ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
                ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 28303570 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 28303614



 Score =  109 bits (55), Expect = 6e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                            
Query: 137      ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 196
                |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 28307325 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 28307384

                                                                            
Query: 197      tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 252
                |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 28307385 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 28307444
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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  121 bits (61), Expect = 2e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                        
Query: 146  gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 205
            |||||||| |||||||||||||| |||||||| | ||| ||||||||||| ||||| |||
Sbjct: 1253 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcacc 1194

                                                                        
Query: 206  agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 265
            ||||| | |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 1193 agcatattgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 1134

                     
Query: 266  ggcccctcc 274
            |||||||||
Sbjct: 1133 ggcccctcc 1125
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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  121 bits (61), Expect = 2e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                        
Query: 146  gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 205
            |||||||| |||||||||||||| |||||||| | ||| ||||||||||| ||||| |||
Sbjct: 1116 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcacc 1057

                                                                        
Query: 206  agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 265
            ||||| | |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 1056 agcatattgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 997

                     
Query: 266  ggcccctcc 274
            |||||||||
Sbjct: 996  ggcccctcc 988
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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1357 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1298

                                                                        
Query: 155  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1297 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1238

                                                         
Query: 215  ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
            ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 1237 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 1193
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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1308 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1249

                                                                        
Query: 155  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1248 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1189

                                                         
Query: 215  ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
            ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 1188 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 1144
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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1346 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1287

                                                                        
Query: 155  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1286 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1227

                                                         
Query: 215  ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
            ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 1226 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 1182
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>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1345 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1286

                                                                        
Query: 155  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1285 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1226

                                                         
Query: 215  ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
            ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 1225 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 1181
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>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1129 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1070

                                                                        
Query: 155  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1069 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1010

                                                         
Query: 215  ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
            ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 1009 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 965
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Plus

                                                                            
Query: 95       ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
                |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 28285899 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 28285958

                                                                            
Query: 155      aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
                | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 28285959 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 28286018

                                                             
Query: 215      ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
                ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 28286019 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 28286063



 Score =  109 bits (55), Expect = 6e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                            
Query: 137      ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 196
                |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 28289774 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 28289833

                                                                            
Query: 197      tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 252
                |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 28289834 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 28289893
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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1350 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1291

                                                                        
Query: 155  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1290 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1231

                                                         
Query: 215  ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
            ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 1230 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 1186
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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  121 bits (61), Expect = 2e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285

                                                                        
Query: 155  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225

                                                         
Query: 215  ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
            ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaac 1180
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>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  113 bits (57), Expect = 4e-22
 Identities = 138/165 (83%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1314 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1255

                                                                        
Query: 155  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1254 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1195

                                                         
Query: 215  ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
            |||||||| |||||||| || || |||||||||||||| ||||||
Sbjct: 1194 ccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaac 1150
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>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  113 bits (57), Expect = 4e-22
 Identities = 138/165 (83%)
 Strand = Plus / Minus

                                                                       
Query: 95  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 154
           |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 563 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 504

                                                                       
Query: 155 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
           | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 503 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 444

                                                        
Query: 215 ccgtactccatgagcttctctatggtcatcttgggctggtcgaac 259
           |||||||| |||||||| || || |||||||||||||| ||||||
Sbjct: 443 ccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaac 399
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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 170  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
            ||||||||||||||||| || |||||||||||||| |||||||||||||||||||  | |
Sbjct: 1277 agctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtactccagcaac 1218

                                         
Query: 230  ttctctatggtcatcttgggctggtcgaa 258
            ||||| |  |||||||||||||| |||||
Sbjct: 1217 ttctccaccgtcatcttgggctgctcgaa 1189
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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 170  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
            ||||||||||||||||| || |||||||||||||| |||||||||||||||||||  | |
Sbjct: 1287 agctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtactccagcaac 1228

                                         
Query: 230  ttctctatggtcatcttgggctggtcgaa 258
            ||||| |  |||||||||||||| |||||
Sbjct: 1227 ttctccaccgtcatcttgggctgctcgaa 1199
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>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 170  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1346 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1287

                                         
Query: 230  ttctctatggtcatcttgggctggtcgaa 258
            ||||| |  |||||||| ||||| |||||
Sbjct: 1286 ttctcgactgtcatctttggctgctcgaa 1258
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>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 170  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1091 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1032

                                         
Query: 230  ttctctatggtcatcttgggctggtcgaa 258
            ||||| |  |||||||| ||||| |||||
Sbjct: 1031 ttctcgactgtcatctttggctgctcgaa 1003
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>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 170 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
           ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 416 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 357

                                  
Query: 230 ttctctatggtcatcttgggctg 252
           ||||| |  |||||||| |||||
Sbjct: 356 ttctccactgtcatctttggctg 334
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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                        
Query: 170  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1266 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1207

                                   
Query: 230  ttctctatggtcatcttgggctg 252
            ||||| |  |||||||| |||||
Sbjct: 1206 ttctccactgtcatctttggctg 1184
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>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 170 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 229
           ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 210 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 151

                                  
Query: 230 ttctctatggtcatcttgggctg 252
           ||||| |  |||||||| |||||
Sbjct: 150 ttctcgactgtcatctttggctg 128
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>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 181  cttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctctatggt 240
            |||||||||||||||||||||||| ||||||   |||||  | | |||||| || || ||
Sbjct: 1293 cttgacgttctcctgctcctggacaagcatgcctccgtagccaaggagcttatcaattgt 1234

                        
Query: 241  catcttgggctg 252
            ||||||||||||
Sbjct: 1233 catcttgggctg 1222
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>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 164  tcggcgagctgcacacgcttgacgttctcctgctc 198
            ||||| |||||||| ||||||||||||||||||||
Sbjct: 3239 tcggccagctgcacgcgcttgacgttctcctgctc 3205
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>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
            activase mRNA, complete cds
          Length = 1693

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 164  tcggcgagctgcacacgcttgacgttctcctgctc 198
            ||||| |||||||| ||||||||||||||||||||
Sbjct: 1207 tcggccagctgcacgcgcttgacgttctcctgctc 1173
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>gb|DQ123944.1| Coffea arabica x Coffea canephora clone HT-SSH2-H08 mRNA sequence
          Length = 488

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 185 acgttctcctgctcctggaccagcatgtggccgtac 220
           |||||||||||||| ||||| ||||||| |||||||
Sbjct: 36  acgttctcctgctcttggacgagcatgttgccgtac 1
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>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 167  gcgagctgcacacgcttgacgttctcctgctc 198
            ||||||||||| |||||||| |||||||||||
Sbjct: 2136 gcgagctgcacgcgcttgacattctcctgctc 2105
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>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence
          Length = 192473

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 180    gcttgacgttctcctgctcctggaccagc 208
              ||||||| |||||||| ||||||||||||
Sbjct: 170620 gcttgacattctcctgttcctggaccagc 170592
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>ref|XM_974982.1| PREDICTED: Mus musculus desmoplakin (Dsp), mRNA
          Length = 8280

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 180  gcttgacgttctcctgctcctggaccagc 208
            ||||||| |||||||| ||||||||||||
Sbjct: 4777 gcttgacattctcctgttcctggaccagc 4749
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>ref|XM_912083.2| PREDICTED: Mus musculus desmoplakin, transcript variant 3 (Dsp), mRNA
          Length = 8583

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 180  gcttgacgttctcctgctcctggaccagc 208
            ||||||| |||||||| ||||||||||||
Sbjct: 4996 gcttgacattctcctgttcctggaccagc 4968
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>ref|XM_621314.3| PREDICTED: Mus musculus desmoplakin, transcript variant 1 (Dsp), mRNA
          Length = 9592

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 180  gcttgacgttctcctgctcctggaccagc 208
            ||||||| |||||||| ||||||||||||
Sbjct: 5360 gcttgacattctcctgttcctggaccagc 5332
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>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence
          Length = 199240

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 180   gcttgacgttctcctgctcctggaccagc 208
             ||||||| |||||||| ||||||||||||
Sbjct: 40085 gcttgacattctcctgttcctggaccagc 40057
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>dbj|AK009006.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2300002E22 product:desmoplakin, full
           insert sequence
          Length = 1423

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 180 gcttgacgttctcctgctcctggaccagc 208
           ||||||| |||||||| ||||||||||||
Sbjct: 803 gcttgacattctcctgttcctggaccagc 775
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>gb|BC033467.1| Mus musculus desmoplakin, mRNA (cDNA clone IMAGE:4949004)
          Length = 2915

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 180  gcttgacgttctcctgctcctggaccagc 208
            ||||||| |||||||| ||||||||||||
Sbjct: 2607 gcttgacattctcctgttcctggaccagc 2579
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>gb|BC033474.1| Homo sapiens renin, mRNA (cDNA clone MGC:34221 IMAGE:5188566),
           complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 956 ctccatgagcttctctatgg 937
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>gb|AY664490.1| Macaca fascicularis renin (REN) mRNA, complete cds
          Length = 1280

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 989 ctccatgagcttctctatgg 970
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>gb|BC047752.1| Homo sapiens renin, mRNA (cDNA clone MGC:54147 IMAGE:5590211),
           complete cds
          Length = 1471

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 959 ctccatgagcttctctatgg 940
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>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                        
Query: 155  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 214
            ||||||||||| || | ||| || | ||| || ||||| ||||| || || ||||||| |
Sbjct: 1332 aggtacttgtcagctaactgaactctcttaacattctcttgctcttgaacaagcatgttg 1273

                                            
Query: 215  ccgtactccatgagcttctctatggtcatctt 246
            |||||||| | |||||| || || ||||||||
Sbjct: 1272 ccgtactcgaggagcttatcgatagtcatctt 1241
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>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence
          Length = 162020

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 44     catatatatagtgcatgcatgcat 67
              ||||| ||||||||||||||||||
Sbjct: 122744 catatgtatagtgcatgcatgcat 122721
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>ref|NM_001032916.1| Macaca mulatta prorenin (REN), mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955
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>ref|XM_743857.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g05590)
           partial mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 ccgtactccatgagcttctc 234
           ||||||||||||||||||||
Sbjct: 212 ccgtactccatgagcttctc 193
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>gb|L00071.1|HUMREN08 Human renin gene, exon 8
          Length = 172

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 124 ctccatgagcttctctatgg 105
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>gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, complete sequence
          Length = 198453

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    catatatatagtgcatgcat 63
             ||||||||||||||||||||
Sbjct: 31511 catatatatagtgcatgcat 31492
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>ref|NM_000537.2| Homo sapiens renin (REN), mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955
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>emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chromosome 1 Contains the
             SOX13 gene for SOX13   SRY (sex determining region Y)-box
             13, two novel genes, a novel gene (FLJ10761), the 3' end
             of the REN gene for renin and two CpG islands, complete
             sequence
          Length = 101862

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   ctccatgagcttctctatgg 239
             ||||||||||||||||||||
Sbjct: 95051 ctccatgagcttctctatgg 95070
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>emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in linkage group 19,
             complete sequence
          Length = 187377

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tatatagtgcatgcatgcat 67
             ||||||||||||||||||||
Sbjct: 65570 tatatagtgcatgcatgcat 65551
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>emb|X00063.1|HSRENK Human kidney mRNA fragment for renin (aa 105-401)
          Length = 1096

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 609 ctccatgagcttctctatgg 590
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>emb|CR926484.1| Pongo pygmaeus mRNA; cDNA DKFZp469I191 (from clone DKFZp469I191)
          Length = 1474

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955
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>emb|CR536498.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0620D for
           gene REN, renin; complete cds, incl. stopcodon
          Length = 1221

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 930 ctccatgagcttctctatgg 911
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>gb|AY436324.1| Homo sapiens renin (REN) gene, complete cds
          Length = 14148

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   ctccatgagcttctctatgg 239
             ||||||||||||||||||||
Sbjct: 11638 ctccatgagcttctctatgg 11619
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>emb|AJ132342.1|CJA132342 Callithrix jacchus mRNA for preprorenin
          Length = 1203

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 912 ctccatgagcttctctatgg 893
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>emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on chromosome 13 Contains the
              3' end of the Csh1 gene for chorionic somatomammotropin
              hormone 1,  two genes for novel proteins similar to
              chorionic somatomammotropin hormone 1 (Csh1), the Prlpi
              gene for prolactin-like protein I (Prlpj, decidualin), the
              Csh2 gene for chorionic somatomammotropin hormone 2, the
              gene for protein 1600016E11RIK similar to prolactin and a
              novel gene (4930511O05Rik), complete sequence
          Length = 207737

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 33     aaatagtccaacatatatatagtg 56
              ||||||||||| ||||||||||||
Sbjct: 162426 aaatagtccaaaatatatatagtg 162403
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>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 215 ccgtactccatgagcttctctatggtcatctt 246
           |||||||| | ||||||||| |||||||||||
Sbjct: 495 ccgtactcgaggagcttctcaatggtcatctt 464
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>gb|M10151.1|HUMRENA4 Homo sapiens renin (REN) gene, exons 6, 7, 8, and 9
          Length = 3057

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 220  ctccatgagcttctctatgg 239
            ||||||||||||||||||||
Sbjct: 2172 ctccatgagcttctctatgg 2153
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>gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, complete sequence
          Length = 177303

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    catatatatagtgcatgcat 63
             ||||||||||||||||||||
Sbjct: 68633 catatatatagtgcatgcat 68652
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     cacgccgatctcgccgaccc 326
               ||||||||||||||||||||
Sbjct: 2558497 cacgccgatctcgccgaccc 2558516
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>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete
           sequence
          Length = 146998

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  aacatatatatagtgcatgc 61
           ||||||||||||||||||||
Sbjct: 109 aacatatatatagtgcatgc 90
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>gb|AF193454.1|F193446S09 Pan troglodytes renin (REN) gene, exon 8
          Length = 142

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 112 ctccatgagcttctctatgg 93
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>gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, complete sequence
          Length = 157544

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     acatatatatagtgcatgcatgca 66
              ||||||||||||| ||||||||||
Sbjct: 121059 acatatatatagtacatgcatgca 121036
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>ref|NM_001009122.1| Pan troglodytes renin (REN), mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 930 ctccatgagcttctctatgg 911
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>gb|AY662332.2| Macaca mulatta prorenin (REN) mRNA, complete cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 ctccatgagcttctctatgg 239
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955
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>emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 in linkage group 20,
             complete sequence
          Length = 170767

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 225   tgagcttctctatggtcatcttgg 248
             |||||||||| |||||||||||||
Sbjct: 59941 tgagcttctcaatggtcatcttgg 59964
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>gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, complete sequence
          Length = 151468

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aacatatatatagtgcatgc 61
             ||||||||||||||||||||
Sbjct: 19290 aacatatatatagtgcatgc 19309
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>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds
          Length = 1674

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 215  ccgtactccatgagcttctctatggtcatctt 246
            |||||||| | ||||||||| |||||||||||
Sbjct: 1255 ccgtactcgaggagcttctcaatggtcatctt 1224
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>emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chromosome X, complete
             sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tgcatgcatgcatcttaagt 74
             ||||||||||||||||||||
Sbjct: 22325 tgcatgcatgcatcttaagt 22306


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,764,107
Number of Sequences: 3902068
Number of extensions: 2764107
Number of successful extensions: 53131
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52856
Number of HSP's gapped (non-prelim): 254
length of query: 336
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 314
effective length of database: 17,147,199,772
effective search space: 5384220728408
effective search space used: 5384220728408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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