>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                           
Query: 19      catcctgagagactgttacagaccattaataacttcgtccgcaccagatccatcgagatg 78
               ||||| |||||||||||||||||    |||||||| |||||||||||||| |||||||||
Sbjct: 6219286 catccagagagactgttacagacggccaataactttgtccgcaccagatcgatcgagatg 6219345

                
Query: 79      g 79
               |
Sbjct: 6219346 g 6219346

>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0436F11
          Length = 165550

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                          
Query: 19     catcctgagagactgttacagaccattaataacttcgtccgcaccagatccatcgagatg 78
              ||||| |||||||||||||||||    |||||||| |||||||||||||| |||||||||
Sbjct: 133105 catccagagagactgttacagacggccaataactttgtccgcaccagatcgatcgagatg 133164

               
Query: 79     g 79
              |
Sbjct: 133165 g 133165

>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0516A04
          Length = 145107

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                         
Query: 19    catcctgagagactgttacagaccattaataacttcgtccgcaccagatccatcgagatg 78
             ||||| |||||||||||||||||    |||||||| |||||||||||||| |||||||||
Sbjct: 13362 catccagagagactgttacagacggccaataactttgtccgcaccagatcgatcgagatg 13421

              
Query: 79    g 79
             |
Sbjct: 13422 g 13422

>dbj|AK058664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G07, full
            insert sequence
          Length = 1610

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                        
Query: 19   catcctgagagactgttacagaccattaataacttcgtccgcaccagatccatcgagatg 78
            ||||| |||||||||||||||||    |||||||| |||||||||||||| |||||||||
Sbjct: 1560 catccagagagactgttacagacggccaataactttgtccgcaccagatcgatcgagatg 1501

             
Query: 79   g 79
            |
Sbjct: 1500 g 1500

>gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, complete sequence
          Length = 187685

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 20    atcctgagagactgttacagaccat 44
             |||||||||||||||| ||||||||
Sbjct: 73304 atcctgagagactgtttcagaccat 73328

>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome
          Length = 235645

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   gcgttcgttggcgccgctgc 238
             ||||||||||||||||||||
Sbjct: 22359 gcgttcgttggcgccgctgc 22340

>gb|AC164640.4| Mus musculus BAC clone RP23-228M12 from chromosome 7, complete sequence
          Length = 232468

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   ctgcagaggaggcctggcca 254
             ||||||||||||||||||||
Sbjct: 41801 ctgcagaggaggcctggcca 41782

>gb|AY486470.1|AY486470S01 Human herpesvirus 5 strain Toledo genome, partial sequence
          Length = 14213

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   gcgttcgttggcgccgctgc 238
             ||||||||||||||||||||
Sbjct: 10007 gcgttcgttggcgccgctgc 9988

>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence
          Length = 233739

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    gcgttcgttggcgccgctgc 238
              ||||||||||||||||||||
Sbjct: 199831 gcgttcgttggcgccgctgc 199850

>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence
          Length = 229209

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    gcgttcgttggcgccgctgc 238
              ||||||||||||||||||||
Sbjct: 205805 gcgttcgttggcgccgctgc 205824

>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence
          Length = 234881

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   gcgttcgttggcgccgctgc 238
             ||||||||||||||||||||
Sbjct: 58055 gcgttcgttggcgccgctgc 58036

>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence
          Length = 226889

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    gcgttcgttggcgccgctgc 238
              ||||||||||||||||||||
Sbjct: 201257 gcgttcgttggcgccgctgc 201276

>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence
          Length = 229700

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    gcgttcgttggcgccgctgc 238
              ||||||||||||||||||||
Sbjct: 205905 gcgttcgttggcgccgctgc 205924

>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence
          Length = 229483

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   gcgttcgttggcgccgctgc 238
             ||||||||||||||||||||
Sbjct: 52907 gcgttcgttggcgccgctgc 52888

>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome
          Length = 231236

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   gcgttcgttggcgccgctgc 238
             ||||||||||||||||||||
Sbjct: 20953 gcgttcgttggcgccgctgc 20934

>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    ggcgccctgctgctgagcgt 213
              ||||||||||||||||||||
Sbjct: 336817 ggcgccctgctgctgagcgt 336836

>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14
          Length = 255260

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    ggcgccctgctgctgagcgt 213
              ||||||||||||||||||||
Sbjct: 129210 ggcgccctgctgctgagcgt 129229

>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12
          Length = 257701

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    ggcgccctgctgctgagcgt 213
              ||||||||||||||||||||
Sbjct: 170001 ggcgccctgctgctgagcgt 170020

>dbj|AB169406.1| Macaca fascicularis testis cDNA, clone: QtsA-19793, similar to
           human BUB1 budding uninhibited by benzimidazoles 1
           homologbeta (yeast) (BUB1B), mRNA, RefSeq: NM_001211.3
          Length = 2246

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 20  atcctgagagactgttacag 39
           ||||||||||||||||||||
Sbjct: 671 atcctgagagactgttacag 690

>gb|AC122263.5| Mus musculus BAC clone RP23-190O11 from 15, complete sequence
          Length = 207234

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    ctccttttctcagccttgag 172
              ||||||||||||||||||||
Sbjct: 142687 ctccttttctcagccttgag 142668

>gb|L10720.1|BPETOXOP Bordetella pertussis toxin liberation operon
          Length = 9342

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  ggcgccctgctgctgagcgt 213
            ||||||||||||||||||||
Sbjct: 7055 ggcgccctgctgctgagcgt 7074


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,470,919
Number of Sequences: 3902068
Number of extensions: 2470919
Number of successful extensions: 48896
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48852
Number of HSP's gapped (non-prelim): 40
length of query: 258
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 236
effective length of database: 17,147,199,772
effective search space: 4046739146192
effective search space used: 4046739146192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)