>COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = -2

Query: 214 QILTVIH-LDSVENYRGHLWLLLAWCSTR 131
           ++L V H + SV+ YRG LW+L  +CST+
Sbjct: 441 KMLEVFHAIKSVKIYRGALWILGEYCSTK 469

>COPB_MOUSE (Q9JIF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = -2

Query: 214 QILTVIH-LDSVENYRGHLWLLLAWCSTR 131
           ++L V H + SV+ YRG LW+L  +CST+
Sbjct: 441 KMLEVFHAIKSVKIYRGALWILGEYCSTK 469

>COPB_HUMAN (P53618) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = -2

Query: 214 QILTVIH-LDSVENYRGHLWLLLAWCSTR 131
           ++L V H + SV+ YRG LW+L  +CST+
Sbjct: 441 KMLEVFHAIKSVKIYRGALWILGEYCSTK 469

>VNUC_MABVM (P27588) Nucleoprotein (Nucleocapsid protein)|
          Length = 692

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 250 LNLSPEESLSG*QILTVIHLDSVENYRGHLWLLLAWCS 137
           L++SP E      IL +  L+S E+ RG + L L++CS
Sbjct: 100 LDVSPNEPHYSPLILALKTLESTESQRGRIGLFLSFCS 137

>Y2658_LISIN (Q927X9) Hypothetical UPF0230 protein lin2658|
          Length = 283

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 19  DNSSYIVNEVKKTVHSNTEKEK--LQNTNYCE*SGSFCTAEYYTTLRAAKDAPDSSQRYP 192
           D+++Y+ +EVK+ +  N       +   +Y E      TA++Y  ++ A++ P SSQ  P
Sbjct: 10  DSTTYLPDEVKEQLRINVVPLSVIIDGKSYRE-GEELSTADFYKKVKEAENFPTSSQPAP 68

>CT024_MOUSE (Q9CQT9) Protein C20orf24 homolog|
          Length = 129

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 27  FIYCQRSEENGTFE-HREGEITKYQLLRIIWIFLYRRV 137
           ++     E  GT+E  +EG +T + L  +IWI  Y  +
Sbjct: 89  YLQIDEEEYGGTWELTKEGFMTSFALFMVIWIIFYTAI 126


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,099,086
Number of Sequences: 219361
Number of extensions: 623720
Number of successful extensions: 1481
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)