ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet73a06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 Score = 428 bits (216), Expect = e-117 Identities = 290/313 (92%), Gaps = 10/313 (3%) Strand = Plus / Minus Query: 28 tactagatacacacacaaacaca--ttgttgcctcgattctttcctctccaccgaccaac 85 |||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||| Sbjct: 1114 tactagatacacacaccaacacacattgttgcctcgattgtttcctctccaccgatcaac 1055 Query: 86 ccacgtatgcatgcacaaaagat--gagtatcttcacttctgctatgctctagttagact 143 ||||||| ||||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 1054 ccacgtacgcatgcacacaagataggatcttcttcacttctgctctgctctagttagact 995 Query: 144 cgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccgaggt 203 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 994 cgagctgcgcgtaccacacaccctggatcttgacatccttgggcgcct------cgaggt 941 Query: 204 cggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 263 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 940 cggtgtctgacggctgcacgctctcgaagacgccgatcacctcgccggtctccggcttgc 881 Query: 264 tcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttctcct 323 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 tcttggtgacgctgagcgtgatgttgcccgtggaggaggacgcgttcttcacgttctcct 821 Query: 324 tggccagctcctc 336 |||||| |||||| Sbjct: 820 tggccaactcctc 808
>ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1000 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 941 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 940 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 881 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 880 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 821 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 820 ccttagcgagctcctc 805
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 17346636 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 17346577 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 17346576 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 17346517 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 17346516 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 17346457 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 17346456 ccttagcgagctcctc 17346441
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 112897 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 112838 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 112837 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 112778 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 112777 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 112718 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 112717 ccttagcgagctcctc 112702
>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full insert sequence Length = 1286 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1065 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1006 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1005 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 946 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 945 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 886 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 885 ccttagcgagctcctc 870
>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full insert sequence Length = 1217 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 952 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 893 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 892 ccttagcgagctcctc 877
>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full insert sequence Length = 1293 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 952 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 893 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 892 ccttagcgagctcctc 877
>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full insert sequence Length = 1292 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 889 ccttagcgagctcctc 874
>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full insert sequence Length = 1272 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 989 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 929 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 870 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 869 ccttagcgagctcctc 854
>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full insert sequence Length = 1159 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 989 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 929 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 870 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 869 ccttagcgagctcctc 854
>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full insert sequence Length = 1290 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 889 ccttagcgagctcctc 874
>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full insert sequence Length = 1313 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1052 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 993 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 992 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 933 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 932 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 873 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 872 ccttagcgagctcctc 857
>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full insert sequence Length = 1332 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1074 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1015 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1014 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 955 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 954 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 895 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 894 ccttagcgagctcctc 879
>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full insert sequence Length = 1208 Score = 246 bits (124), Expect = 4e-62 Identities = 178/196 (90%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 321 ccttggccagctcctc 336 |||| || |||||||| Sbjct: 889 ccttagcgagctcctc 874
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 208 bits (105), Expect = 8e-51 Identities = 163/184 (88%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 200 |||||||||| |||||||| | ||||||||||||||||||||||||||||| |||| Sbjct: 1322 actcgagctgagcgtaccagannnnntggatcttgacatccttgggcgccttggccccga 1263 Query: 201 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 260 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct: 1262 ggtcggtgtcggacggctgcacgctctcgaagacgccgatgacctcgccggtctccgggt 1203 Query: 261 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 320 |||||||||| ||||| | ||||||||||| |||||||||| |||||||| | ||||| Sbjct: 1202 tgctcttggtgacgctcaacgtgatgttgccggtggaggaggcggcgttcttgatgttct 1143 Query: 321 cctt 324 |||| Sbjct: 1142 cctt 1139
>dbj|D21109.1|RICYK174 Oryza sativa mRNA for oxygen-evolving protein, partial sequence Length = 328 Score = 83.8 bits (42), Expect = 3e-13 Identities = 53/57 (92%) Strand = Plus / Minus Query: 145 gagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccgag 201 |||||||||||||||||| || ||||||||||||||||||||| |||| |||||||| Sbjct: 86 gagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttngcgccgag 30
>dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT11O06, TM0194, complete sequence Length = 108277 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 140 gactcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccg 199 ||||||||||| || ||||| || ||||||||||| |||||||| || || || || || Sbjct: 66564 gactcgagctgagcataccaaactccctggatcttcacatcctttggagctttcgctccc 66623 Query: 200 aggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggc 259 | || ||||| |||||||| | ||||||||| || || |||||||| ||||| || ||| Sbjct: 66624 aaatcagtgtcggacggctgaatgctctcgaacacaccaatcacctcaccggtatcaggc 66683 Query: 260 ttgctcttggtcacgct 276 ||||||| |||||||| Sbjct: 66684 ttgctctgtgtcacgct 66700 Score = 40.1 bits (20), Expect = 4.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 140 gactcgagctgcgcgtaccacacaccctggatcttgacatcctt 183 ||||| ||||| || ||||| || ||||||||||| |||||||| Sbjct: 55661 gactcaagctgagcataccaaactccctggatcttcacatcctt 55704
>emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || |||| ||| || || ||| Sbjct: 999 taccacaccccttggatcttcacatcctttggtaccttagcaccgaagtcagtatccgac 940 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 939 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 881
>emb|Y15433.1|ATY15433 Arabidopsis thaliana psbO gene Length = 1520 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| ||||| ||| Sbjct: 1400 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtgtccgac 1341 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1340 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctcttagtcac 1282
>dbj|AB043960.2| Bruguiera gymnorrhiza psbO mRNA for oxygen evolving enhancer protein 1 precursor, complete cds Length = 1102 Score = 65.9 bits (33), Expect = 8e-08 Identities = 138/173 (79%) Strand = Plus / Minus Query: 164 ccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcacg 223 |||||||||||||||||||| || |||| || || | || ||||| || || |||| | Sbjct: 980 ccctggatcttgacatccttagggacctttgctcccaaatcagtgtcagatggttgcagg 921 Query: 224 ctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggtg 283 |||||||| || || || ||||| |||||||| |||||||||||||| || | |||||| Sbjct: 920 ctctcgaacactccaataacctctccggtctcaggcttgctcttggtgacacccagggtg 861 Query: 284 atgttgcccgtggaggaggacgcgttcttcacgttctccttggccagctcctc 336 || || || || || || || | |||||| | ||||||||||| |||||||| Sbjct: 860 attttcccagttgacgatgatgtgttcttgatgttctccttggtgagctcctc 808
>ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) AT5G66570 (PSBO-1) mRNA, complete cds Length = 1239 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1069 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1010 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1009 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 951
>gb|BT015528.1| Arabidopsis thaliana At5g66570 mRNA sequence Length = 744 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 728 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 669 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 668 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 610
>gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1031 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 983 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 924 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 923 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 865
>gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1114 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1028 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 969 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 968 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 910
>gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 999 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 983 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 924 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 923 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 865
>gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1141 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1156 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1023 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 964 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 963 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 905
>gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (At5g66570; K1F13.25) mRNA, complete cds Length = 1118 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1019 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 960 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 959 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 901
>gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1132 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1150 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>emb|BX830796.1|CNS09ZFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1399 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1340 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1339 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 1281
>emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1008 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 949 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 948 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 890
>gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete sequence Length = 1202 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1069 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1010 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1009 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 951
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 59024 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 58965 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 58964 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 58906
>emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving protein Length = 1140 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1016 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 957 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 956 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 898
>gb|AY364014.1| Brassica rapa photosystem II protein (psbO) mRNA, complete cds Length = 1156 Score = 54.0 bits (27), Expect = 3e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || ||||||| || | ||| || || ||| Sbjct: 1038 taccacaccccttggatcttcacatcctttggtaccttggcacccaagtcagtatccgac 979 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 || || | |||||||| || || ||||| || || |||||||| |||||||||||||| Sbjct: 978 gggtgaagactctcgaacactccgatcacttctcctgtctccggtttgctcttggtcac 920
>gb|AY641568.1| Brassica oleracea photosystem II protein (psbO) mRNA, complete cds Length = 1158 Score = 54.0 bits (27), Expect = 3e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 155 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 214 |||||||| || |||||||| |||||||| || ||||||| || | ||| || || ||| Sbjct: 1047 taccacaccccttggatcttcacatcctttggtaccttggcacccaagtcagtatcagac 988 Query: 215 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 ||||| | |||| ||| || || ||||| || || |||||||| |||||||||||||| Sbjct: 987 ggctgaagactctggaacactccgatcacttctcctgtctccggtttgctcttggtcac 929
>emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1088 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 224 ctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 273 |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 947 ctctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 898
>gb|AY456395.1| 'Chlorella' ellipsoidea oxygen-evolving enhancer protein 1 mRNA, partial cds Length = 817 Score = 46.1 bits (23), Expect = 0.072 Identities = 44/51 (86%) Strand = Plus / Minus Query: 169 gatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctg 219 |||||||||||||||||| ||||||| || ||||| ||||| || ||||| Sbjct: 489 gatcttgacatccttgggggccttggaccccaggtctgtgtcagagggctg 439
>gb|AY220076.1| Nicotiana tabacum oxygen evolving complex 33 kDa photosystem II protein (PsbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1263 Score = 46.1 bits (23), Expect = 0.072 Identities = 98/123 (79%) Strand = Plus / Minus Query: 163 accctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 222 ||||||||| || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 991 accctggattttcacatccttggggacctttgcaccgagatcagtatcagatggctggat 932 Query: 223 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 282 |||||| || || || || ||||| |||||||| ||||||| || ||| || || ||||| Sbjct: 931 gctctcaaatactccaatgacctcaccggtctctggcttgcactgggtaacactcagggt 872 Query: 283 gat 285 ||| Sbjct: 871 gat 869
>gb|AY952375.1| Nicotiana benthamiana chloroplast photosynthetic oxygen-evolving protein 33 kDa subunit (psbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1048 Score = 46.1 bits (23), Expect = 0.072 Identities = 98/123 (79%) Strand = Plus / Minus Query: 163 accctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 222 ||||||||| || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 985 accctggattttcacatccttggggacctttgcaccgagatcagtatcagatggctggat 926 Query: 223 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 282 |||||| || || || || ||||| ||||||| |||||||||| ||| || || ||||| Sbjct: 925 gctctcaaatactccaatgacctcaccggtctgtggcttgctctgggtaacactcagggt 866 Query: 283 gat 285 ||| Sbjct: 865 gat 863
>emb|X64349.1|NT33WOP2 N.tabacum mRNA for 33 kDa polypeptide of water-oxidizing complex of photosystem II Length = 1123 Score = 46.1 bits (23), Expect = 0.072 Identities = 98/123 (79%) Strand = Plus / Minus Query: 163 accctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 222 |||||| || || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 991 accctgaattttcacatccttgggaacctttgcaccgagatcagtatcagatggctggat 932 Query: 223 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 282 |||||| || || || || ||||| |||||||| |||||||||| ||| || || ||||| Sbjct: 931 gctctcaaatactccaatgacctcaccggtctctggcttgctctgggtaacactcagggt 872 Query: 283 gat 285 ||| Sbjct: 871 gat 869
>gb|AC132302.3| Mus musculus BAC clone RP24-279N5 from chromosome 3, complete sequence Length = 157307 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacacatt 52 |||||||||||||||||||||| Sbjct: 90658 tagatacacacacaaacacatt 90679
>gb|AC156615.7| Mus musculus chromosome 3, clone RP23-1B20, complete sequence Length = 210003 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacacatt 52 |||||||||||||||||||||| Sbjct: 171881 tagatacacacacaaacacatt 171902
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 141 actcgagctgcgcgtaccacac 162 |||||||||||||||||||||| Sbjct: 28 actcgagctgcgcgtaccacac 7
>gb|AC107725.10| Mus musculus chromosome 5, clone RP23-477O15, complete sequence Length = 169321 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 tatactagatacacacacaaacaca 50 ||||||||||||||||||| ||||| Sbjct: 99393 tatactagatacacacacacacaca 99417
>gb|AC147721.6| Mus musculus chromosome 10, clone RP24-250J7, complete sequence Length = 70656 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 atacacacacaaacacattgttgcc 58 ||||||||||| ||||||||||||| Sbjct: 66999 atacacacacatacacattgttgcc 66975
>gb|AY071483.1| Drosophila melanogaster RE55321 full insert cDNA Length = 952 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 accctggatcttgacatcctt 183 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence Length = 195587 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 acacacacaaacacattgttg 56 ||||||||||||||||||||| Sbjct: 125345 acacacacaaacacattgttg 125325
>gb|AC099601.6| Mus musculus chromosome 7, clone RP23-240K1, complete sequence Length = 252659 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 atacacacacaaacacattgt 54 ||||||||||||||||||||| Sbjct: 110153 atacacacacaaacacattgt 110173
>emb|AL596022.12| Zebrafish DNA sequence from clone BUSM1-107O16 in linkage group 17 Contains part of a novel gene for a protein similar to vertebrate anaplastic lymphoma kinase (ALK) and leukocyte tyrosine kinase receptor prescursor (LTK or TYK1) and part of a novel gene for a protein similar to vertebrate inositol 1,4,5-triphosphate 3-kinase (ITPKA), complete sequence Length = 121941 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 acacacacaaacacattgttg 56 ||||||||||||||||||||| Sbjct: 38879 acacacacaaacacattgttg 38899
>gb|AC102677.9| Mus musculus chromosome 5, clone RP24-67M11, complete sequence Length = 167898 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacacat 51 ||||||||||||||||||||| Sbjct: 108202 tagatacacacacaaacacat 108222
>gb|DQ122908.1| Chlamydomonas incerta chloroplast oxygen-evolving enhancer protein 1 (Psb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1213 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 179 tccttgggcgccttggcgccgaggtcggtgtctgacggctg 219 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 857 tccttgggggccttggcgcccaggtcagtgtccgagggctg 817
>ref|NM_143543.2| Drosophila melanogaster Jonah 99Fi CG18030-RA (Jon99Fi), mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 accctggatcttgacatcctt 183 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>ref|NM_143542.1| Drosophila melanogaster Jonah 99Fii CG2229-RA (Jon99Fii), mRNA Length = 914 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 accctggatcttgacatcctt 183 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>gb|AY070585.1| Drosophila melanogaster RE68767 full length cDNA Length = 937 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 accctggatcttgacatcctt 183 ||||||||||||||||||||| Sbjct: 132 accctggatcttgacatcctt 112
>gb|AY069737.1| Drosophila melanogaster LP05501 full length cDNA Length = 4651 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 accctggatcttgacatcctt 183 ||||||||||||||||||||| Sbjct: 3832 accctggatcttgacatcctt 3812
>emb|BX539317.4| Zebrafish DNA sequence from clone DKEY-170L10 in linkage group 17, complete sequence Length = 117893 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 acacacacaaacacattgttg 56 ||||||||||||||||||||| Sbjct: 35597 acacacacaaacacattgttg 35617
>gb|AC008299.5|AC008299 Drosophila melanogaster, chromosome 3R, region 99F4-99F11, BAC clone BACR48G16, complete sequence Length = 173844 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 accctggatcttgacatcctt 183 ||||||||||||||||||||| Sbjct: 59864 accctggatcttgacatcctt 59844 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 accctggatcttgacatcctt 183 ||||||||||||||||||||| Sbjct: 58565 accctggatcttgacatcctt 58585
>gb|AC117622.10| Mus musculus chromosome 5, clone RP23-114L5, complete sequence Length = 185368 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacacat 51 ||||||||||||||||||||| Sbjct: 1814 tagatacacacacaaacacat 1834
>emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in linkage group 8 Contains part of a novel gene for a protein similar to human FLJ12550, the pim1 gene for pim-1 oncogene (proviral integration site 1), part of a novel gene for a protein similar to vertebrate UDP-galactose transporters, a novel gene for a protein similar to vertebrate caldesmon 1 (CALD1) and a CpG island, complete sequence Length = 140984 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacacat 51 ||||||||||||||||||||| Sbjct: 123340 tagatacacacacaaacacat 123360
>gb|AE003774.3| Drosophila melanogaster chromosome 3R, section 112 of 118 of the complete sequence Length = 239051 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 accctggatcttgacatcctt 183 ||||||||||||||||||||| Sbjct: 57447 accctggatcttgacatcctt 57427 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 accctggatcttgacatcctt 183 ||||||||||||||||||||| Sbjct: 56148 accctggatcttgacatcctt 56168
>gb|AC102467.6| Mus musculus chromosome 1, clone RP24-348G21, complete sequence Length = 167344 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacacat 51 ||||||||||||||||||||| Sbjct: 126906 tagatacacacacaaacacat 126886
>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete sequence Length = 148202 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 acacacacaaacacattgttgcctc 60 ||||||||| ||||||||||||||| Sbjct: 84913 acacacacacacacattgttgcctc 84937
>emb|AL445385.4|CNS07ED1 Human chromosome 14 DNA sequence BAC R-126I9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163784 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 agatacacacacaaacacatt 52 ||||||||||||||||||||| Sbjct: 120308 agatacacacacaaacacatt 120288
>ref|XM_959978.1| Neurospora crassa OR74A hypothetical protein (NCU02477.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 acgctgagggtgatgttgcc 291 |||||||||||||||||||| Sbjct: 119 acgctgagggtgatgttgcc 138
>ref|XM_331675.1| Neurospora crassa OR74A hypothetical protein (NCU02477.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 acgctgagggtgatgttgcc 291 |||||||||||||||||||| Sbjct: 119 acgctgagggtgatgttgcc 138
>gb|AC164103.5| Mus musculus BAC clone RP23-427D2 from chromosome 5, complete sequence Length = 188588 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 agatacacacacaaacacat 51 |||||||||||||||||||| Sbjct: 31552 agatacacacacaaacacat 31571
>gb|AC134438.3| Mus musculus BAC clone RP24-470G3 from chromosome 5, complete sequence Length = 140395 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 agatacacacacaaacacat 51 |||||||||||||||||||| Sbjct: 50855 agatacacacacaaacacat 50836
>gb|AC140233.3| Mus musculus BAC clone RP23-282N19 from chromosome 19, complete sequence Length = 195305 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 29760 tagatacacacacaaacaca 29779
>ref|XM_802280.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511685.40) partial mRNA Length = 2223 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tgttgcccgtggaggaggac 304 |||||||||||||||||||| Sbjct: 446 tgttgcccgtggaggaggac 465
>gb|AC124482.3| Mus musculus BAC clone RP24-120B3 from chromosome 14, complete sequence Length = 165934 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 atactagatacacacacaaacaca 50 |||||||| ||||||||||||||| Sbjct: 143560 atactagacacacacacaaacaca 143583
>gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosome 19, complete sequence Length = 184128 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 ttttatactagatacacacacaaacaca 50 |||||| ||||||||||||||| ||||| Sbjct: 110726 ttttattctagatacacacacacacaca 110753
>ref|XM_815950.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508741.90) partial mRNA Length = 2223 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tgttgcccgtggaggaggac 304 |||||||||||||||||||| Sbjct: 446 tgttgcccgtggaggaggac 465
>gb|AC092089.2| Danio rerio clone 85I7, complete sequence Length = 62442 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 acacacacaaacacattgtt 55 |||||||||||||||||||| Sbjct: 7761 acacacacaaacacattgtt 7780
>gb|AC124178.3| Mus musculus BAC clone RP23-193J15 from 18, complete sequence Length = 206833 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 agatacacacacaaacacat 51 |||||||||||||||||||| Sbjct: 110575 agatacacacacaaacacat 110556
>gb|AC122808.3| Mus musculus BAC clone RP23-298M23 from 3, complete sequence Length = 190130 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 128133 tagatacacacacaaacaca 128114 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 127995 tagatacacacacaaacaca 127976
>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence Length = 218079 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 ttttatactagatacacacacaaacaca 50 |||||| ||||||||||||||| ||||| Sbjct: 209933 ttttattctagatacacacacacacaca 209960
>emb|AL731544.11| Human DNA sequence from clone RP11-514F8 on chromosome 10 Contains the 3' end of the gene for a novel SH2 domain-containing protein, a novel gene and a CpG island, complete sequence Length = 98873 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 agatacacacacaaacacat 51 |||||||||||||||||||| Sbjct: 89120 agatacacacacaaacacat 89101
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G) and a novel gene, complete sequence Length = 145136 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 112 tatcttcacttctgctatgctctagtta 139 ||||| |||||||||| ||||||||||| Sbjct: 137608 tatctgcacttctgctgtgctctagtta 137635
>emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chromosome 1 Contains the 5' end of the SLICK gene for a sodium- and chloride-activated ATP-sensitive potassium channel, complete sequence Length = 185560 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 63208 tagatacacacacaaacaca 63227
>emb|AL589844.4| Human DNA sequence from clone RP11-436F21 on chromosome 9 Contains the 3' end of a novel gene and 5'end of a novel gene, complete sequence Length = 157982 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 62246 tagatacacacacaaacaca 62265
>ref|XM_505779.1| Yarrowia lipolytica CLIB122, YALI0F23221g predicted mRNA Length = 1518 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ttctccttggccagctcctc 336 |||||||||||||||||||| Sbjct: 1508 ttctccttggccagctcctc 1489
>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14 Length = 119219 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 acgctgagggtgatgttgcc 291 |||||||||||||||||||| Sbjct: 90457 acgctgagggtgatgttgcc 90438
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 ccgtggaggaggacgcgttc 310 |||||||||||||||||||| Sbjct: 76750 ccgtggaggaggacgcgttc 76769
>gb|AC108484.25| Mus musculus strain 129/Sv clone ct7-293m19 map 19, complete sequence Length = 170321 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 39142 tagatacacacacaaacaca 39161
>emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, complete sequence Length = 250797 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cacacacaaacacattgttg 56 |||||||||||||||||||| Sbjct: 160427 cacacacaaacacattgttg 160408
>emb|BX005114.6| Mouse DNA sequence from clone RP24-199F23 on chromosome 11 no genes, complete sequence Length = 135695 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 39625 tagatacacacacaaacaca 39606
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 tgagggtgatgttgcccgtggagg 299 |||||||||||| ||||||||||| Sbjct: 3055754 tgagggtgatgtcgcccgtggagg 3055731
>gb|AC116693.23| Mus musculus chromosome 8, clone RP24-372D19, complete sequence Length = 163719 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 34550 tagatacacacacaaacaca 34531 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 34305 tagatacacacacaaacaca 34286
>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence Length = 41295 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ctggatcttgacatccttgg 185 |||||||||||||||||||| Sbjct: 19307 ctggatcttgacatccttgg 19288
>gb|DQ397575.1| Cenarchaeum symbiosum clone C11D05, complete sequence Length = 41867 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ctggatcttgacatccttgg 185 |||||||||||||||||||| Sbjct: 36770 ctggatcttgacatccttgg 36751
>gb|AC026711.6| Homo sapiens chromosome 5 clone CTD-2093E18, complete sequence Length = 191309 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 173809 tagatacacacacaaacaca 173828
>gb|AY860592.1| Physcia aipolia isolate 8Aa 26S ribosomal RNA gene, partial sequence Length = 1314 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gtgatgttgcccgtggagga 300 |||||||||||||||||||| Sbjct: 546 gtgatgttgcccgtggagga 527
>gb|AY860591.1| Physcia aipolia isolate 2Ab 26S ribosomal RNA gene, partial sequence Length = 1437 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gtgatgttgcccgtggagga 300 |||||||||||||||||||| Sbjct: 586 gtgatgttgcccgtggagga 567
>gb|AY860590.1| Physcia aipolia isolate 6Ah 26S ribosomal RNA gene, partial sequence Length = 1321 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gtgatgttgcccgtggagga 300 |||||||||||||||||||| Sbjct: 554 gtgatgttgcccgtggagga 535
>gb|AY773914.1| Physcia aipolia 26S large subunit ribosomal RNA gene, partial sequence Length = 1436 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gtgatgttgcccgtggagga 300 |||||||||||||||||||| Sbjct: 585 gtgatgttgcccgtggagga 566
>gb|AC154576.2| Mus musculus BAC clone RP23-372B6 from chromosome 14, complete sequence Length = 152380 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 agatacacacacaaacacat 51 |||||||||||||||||||| Sbjct: 71581 agatacacacacaaacacat 71600
>gb|AC006375.4| Homo sapiens BAC clone RP11-362A15 from 2, complete sequence Length = 111073 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 atactagatacacacacaaacaca 50 |||||| ||||||||||||||||| Sbjct: 5616 atactacatacacacacaaacaca 5639
>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence Length = 199954 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ttgcctcgattctttcctct 73 |||||||||||||||||||| Sbjct: 120467 ttgcctcgattctttcctct 120448
>gb|AC092620.2| Homo sapiens BAC clone RP11-231E19 from 2, complete sequence Length = 151037 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 agatacacacacaaacacat 51 |||||||||||||||||||| Sbjct: 28057 agatacacacacaaacacat 28038
>gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9, complete sequence Length = 160378 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 61566 tagatacacacacaaacaca 61547
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cgccttggcgccgaggtcgg 206 |||||||||||||||||||| Sbjct: 3379461 cgccttggcgccgaggtcgg 3379480
>emb|Z11999.1|LE33KOECP L.esculentum mRNA for 33kDa precursor protein of oxygen-evolving complex Length = 1175 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 accctggatcttgacatccttggg 186 ||||||||| |||||||||||||| Sbjct: 990 accctggattttgacatccttggg 967
>emb|CR854941.8| Zebrafish DNA sequence from clone CH211-214G6 in linkage group 12, complete sequence Length = 135174 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 ctagatacacacacaaacacattg 53 ||||||||||||||| |||||||| Sbjct: 23476 ctagatacacacacatacacattg 23453
>gb|AC153016.2| Mus musculus BAC clone RP23-182K18 from 13, complete sequence Length = 224420 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 agatacacacacaaacacat 51 |||||||||||||||||||| Sbjct: 149739 agatacacacacaaacacat 149758
>emb|AL117672.5|CNS01DRN Human chromosome 14 DNA sequence BAC R-142C1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179902 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 gttttatactagatacacacacaaacac 49 ||||||||||||| ||| |||||||||| Sbjct: 77284 gttttatactagacacaaacacaaacac 77311
>emb|AL162311.5|CNS01RHR Human chromosome 14 DNA sequence BAC R-317N8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167127 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 144515 tagatacacacacaaacaca 144496
>dbj|AP002427.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-90I16, complete sequence Length = 154159 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atacacacacaaacacattg 53 |||||||||||||||||||| Sbjct: 63890 atacacacacaaacacattg 63909
>emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in linkage group 11, complete sequence Length = 230267 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 atactagatacacacacaaacaca 50 |||||||| ||||||||||||||| Sbjct: 172576 atactagacacacacacaaacaca 172599
>emb|AL954861.11| Zebrafish DNA sequence from clone CH211-8I17, complete sequence Length = 175026 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 85842 tagatacacacacaaacaca 85823
>emb|CT009600.12| Mouse DNA sequence from clone RP23-76M10 on chromosome 14, complete sequence Length = 217257 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 atactagatacacacacaaacaca 50 |||||||| ||||||||||||||| Sbjct: 187219 atactagacacacacacaaacaca 187196
>gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, complete sequence Length = 195652 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 agatacacacacaaacacat 51 |||||||||||||||||||| Sbjct: 128809 agatacacacacaaacacat 128790
>gb|AF037457.1|AF037457 Fritillaria agrestis photosystem II oxygen evolving complex protein 1 precursor (psbO) mRNA, complete cds Length = 1140 Score = 40.1 bits (20), Expect = 4.4 Identities = 92/116 (79%) Strand = Plus / Minus Query: 164 ccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcacg 223 ||||||||||| |||||||| || ||||| | || | ||||| || || ||||| | | Sbjct: 1001 ccctggatcttcacatccttcggagccttagaacccaaatcggtatcagagggctgaatg 942 Query: 224 ctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgag 279 ||||| || || || |||||||| || ||||||||||| || ||||| || ||||| Sbjct: 941 ctctcaaacaccccaatcacctctccagtctccggcttacttttggttacactgag 886
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 acgctgagggtgatgttgcc 291 |||||||||||||||||||| Sbjct: 2482 acgctgagggtgatgttgcc 2501
>gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, complete sequence Length = 228174 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 38720 tagatacacacacaaacaca 38739
>gb|AC150685.2| Mus musculus BAC clone RP23-239C12 from 19, complete sequence Length = 194627 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 24685 tagatacacacacaaacaca 24666
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ttctccttggccagctcctc 336 |||||||||||||||||||| Sbjct: 3045240 ttctccttggccagctcctc 3045259
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 acgctgagggtgatgttgcc 291 |||||||||||||||||||| Sbjct: 2482 acgctgagggtgatgttgcc 2501
>emb|AL137818.4|CNS01DWP Human chromosome 14 DNA sequence BAC R-102C24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179714 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tagatacacacacaaacaca 50 |||||||||||||||||||| Sbjct: 4871 tagatacacacacaaacaca 4852
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 acgctgagggtgatgttgcc 291 |||||||||||||||||||| Sbjct: 2463 acgctgagggtgatgttgcc 2482 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,335,723 Number of Sequences: 3902068 Number of extensions: 3335723 Number of successful extensions: 176268 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 175783 Number of HSP's gapped (non-prelim): 482 length of query: 336 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 314 effective length of database: 17,147,199,772 effective search space: 5384220728408 effective search space used: 5384220728408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
