ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet73a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransgly... 664 0.0
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 139 7e-30
3dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 139 7e-30
4dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
5gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (T... 115 1e-22
6emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein 96 1e-16
7emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransgly... 96 1e-16
8gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase ... 88 2e-14
9gb|AY103775.1| Zea mays PCO076979 mRNA sequence 88 2e-14
10gb|BT014685.1| Oryza sativa AK104912 mRNA sequence 80 6e-12
11dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 80 6e-12
12dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
13dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
14dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
15gb|AY103891.1| Zea mays PCO065722 mRNA sequence 72 1e-09
16gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence 64 3e-07
17gb|AY106776.1| Zea mays PCO076978 mRNA sequence 64 3e-07
18gb|DQ100340.1| Eucalyptus globulus putative xyloglucan endotrans... 56 8e-05
19dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan en... 56 8e-05
20dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein... 54 3e-04
21gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence 52 0.001
22gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotran... 52 0.001
23emb|AJ130885.1|FSY130885 Fagus sylvatica mRNA for xyloglucan end... 48 0.021
24emb|AJ555155.1|CSA555155 Cucumis sativus XTH3 gene for putative ... 46 0.081
25emb|AJ555126.1|CSA555126 Cucumis sativus mRNA for putative xylog... 46 0.081
26gb|AY105365.1| Zea mays PCO092487 mRNA sequence 46 0.081
27gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase h... 46 0.081
28gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase h... 46 0.081
29ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predic... 44 0.32
30gb|AY365421.1| Sesamum indicum xyloglucan endotransglycosylase m... 44 0.32
31emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransgly... 44 0.32
32gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase... 44 0.32
33emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 44 0.32
34dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
35dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
36gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hyd... 42 1.3
37emb|AL591304.1| Human DNA sequence from clone RP11-21G12 on chro... 42 1.3
38dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
39gb|AC087896.15|AC087896 Homo sapiens 12q BAC RP11-777K21 (Roswel... 42 1.3
40dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
41gb|BC090193.1| Xenopus laevis cDNA clone MGC:85054 IMAGE:6327047... 42 1.3
42dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan endot... 42 1.3
43gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase... 42 1.3
44dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferas... 42 1.3
45gb|AC113970.8| Mus musculus chromosome 1, clone RP23-125E16, com... 40 5.0
46emb|AL590111.14| Human DNA sequence from clone RP11-570F3 on chr... 40 5.0
47emb|BX571768.19| Zebrafish DNA sequence from clone DKEYP-2C4 in ... 40 5.0
48gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 5.0
49gb|AC148685.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.0
50dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
51dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
52dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan endot... 40 5.0
53gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan ... 40 5.0
54emb|AL845486.6| Mouse DNA sequence from clone RP23-236H7 on chro... 40 5.0
55dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transf... 40 5.0 
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA)
          Length = 1174

 Score =  664 bits (335), Expect = 0.0
 Identities = 341/343 (99%)
 Strand = Plus / Minus

                                                                        
Query: 35   cagagaaaaacaaacacatgaagaacagaacgagatgagacatatattacacacgatctg 94
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 cagagaaaaacaaacacatgaagaacagaacgagatgagacatatattacacacgatctg 1115

                                                                        
Query: 95   aacgtgacaaggagcaaacagaagaatctaccacccgctccatttcacattatcccccct 154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 aacgtgacaaggagcaaacagaagaatctaccacccgctccatttcacattatcccccct 1055

                                                                        
Query: 155  cactggtccttatttatcatacagtacaatacagacgcccccatcttccctatccccggc 214
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1054 cactggtccttatttatcatacagtacaatacagacgcccccatcttccctatctccggc 995

                                                                        
Query: 215  cgtcttcctccggcgatcgacgtatacacggacggtccaatgctaccttgcttttgatgg 274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994  cgtcttcctccggcgatcgacgtatacacggacggtccaatgctaccttgcttttgatgg 935

                                                                        
Query: 275  acggggactacatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgc 334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934  acggggactacatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgc 875

                                                       
Query: 335  agtagttgtagatcatgtaattgctctgcacccaccgcatccg 377
            |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 874  agtagttgtagatcatgtaattgctctgtacccaccgcatccg 832
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  139 bits (70), Expect = 7e-30
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                            
Query: 284      acatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgt 343
                ||||||||||||||||||||||||||| || || ||||||||| || |||||||||||||
Sbjct: 28773068 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 28773127

                                                  
Query: 344      agatcatgtaattgctctgcacccaccgcatccg 377
                |||||||||| |||||||||||||||||||||||
Sbjct: 28773128 agatcatgtacttgctctgcacccaccgcatccg 28773161



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                            
Query: 291      gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
                |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 28750683 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 28750624

                                    
Query: 351      gtaattgctctgcacccacc 370
                | | || |||||||||||||
Sbjct: 28750623 gaacttcctctgcacccacc 28750604
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score =  139 bits (70), Expect = 7e-30
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                         
Query: 284   acatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgt 343
             ||||||||||||||||||||||||||| || || ||||||||| || |||||||||||||
Sbjct: 80843 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 80902

                                               
Query: 344   agatcatgtaattgctctgcacccaccgcatccg 377
             |||||||||| |||||||||||||||||||||||
Sbjct: 80903 agatcatgtacttgctctgcacccaccgcatccg 80936



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 291   gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
             |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 58458 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 58399

                                 
Query: 351   gtaattgctctgcacccacc 370
             | | || |||||||||||||
Sbjct: 58398 gaacttcctctgcacccacc 58379
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>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
           insert sequence
          Length = 1253

 Score =  139 bits (70), Expect = 7e-30
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                       
Query: 284 acatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgt 343
           ||||||||||||||||||||||||||| || || ||||||||| || |||||||||||||
Sbjct: 989 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 930

                                             
Query: 344 agatcatgtaattgctctgcacccaccgcatccg 377
           |||||||||| |||||||||||||||||||||||
Sbjct: 929 agatcatgtacttgctctgcacccaccgcatccg 896
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>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to
           marker R11, genomic sequence
          Length = 224

 Score =  115 bits (58), Expect = 1e-22
 Identities = 76/82 (92%)
 Strand = Plus / Minus

                                                                       
Query: 284 acatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgt 343
           ||||||||||||||||||||||||||| || || ||||||||| || |||||||||||||
Sbjct: 82  acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 23

                                 
Query: 344 agatcatgtaattgctctgcac 365
           |||||||||| |||||||||||
Sbjct: 22  agatcatgtacttgctctgcac 1
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>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein
          Length = 1187

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                       
Query: 291 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
           |||||||||||||| |||||  || |||||||||||||| ||||||||||||||||||||
Sbjct: 975 gcactcggcggggaggccctctgctacgcgcttggggtcggtgcagtagttgtagatcat 916

                                   
Query: 351 gtaattgctctgcacccaccgcat 374
           | | || ||||||||||| |||||
Sbjct: 915 gaacttcctctgcacccagcgcat 892
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>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEB)
          Length = 1226

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                       
Query: 291 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
           |||||||||||| |||||||  || || ||||||||||| ||||||||||||||||||||
Sbjct: 958 gcactcggcgggcacgccctgcgccacccgcttggggtcggtgcagtagttgtagatcat 899

                                   
Query: 351 gtaattgctctgcacccaccgcat 374
           | | || |||||||||||||||||
Sbjct: 898 gaacttcctctgcacccaccgcat 875
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>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA,
           complete cds
          Length = 1056

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                       
Query: 291 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
           ||||||||| || |||||||  || || ||||||||||| ||||||||||||||||||||
Sbjct: 855 gcactcggcaggcacgccctgcgccacccgcttggggtcggtgcagtagttgtagatcat 796

                                   
Query: 351 gtaattgctctgcacccaccgcat 374
           | | || |||||||||||||||||
Sbjct: 795 gaacttcctctgcacccaccgcat 772
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>gb|AY103775.1| Zea mays PCO076979 mRNA sequence
          Length = 1495

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                       
Query: 318 gcgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaccgcatccg 377
           |||||||||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||
Sbjct: 995 gcgcttggggtcggtgcagtagttgtagatcatgtacttgcgctgcacccagcgcatccg 936
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>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence
          Length = 807

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                       
Query: 291 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
           |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 795 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 736

                               
Query: 351 gtaattgctctgcacccacc 370
           | | || |||||||||||||
Sbjct: 735 gaacttcctctgcacccacc 716
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0622F03
          Length = 170064

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                          
Query: 291    gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
              |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 151249 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 151190

                                  
Query: 351    gtaattgctctgcacccacc 370
              | | || |||||||||||||
Sbjct: 151189 gaacttcctctgcacccacc 151170
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>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
           insert sequence
          Length = 1208

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                       
Query: 291 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
           |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 975 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 916

                               
Query: 351 gtaattgctctgcacccacc 370
           | | || |||||||||||||
Sbjct: 915 gaacttcctctgcacccacc 896
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>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
           insert sequence
          Length = 1208

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                       
Query: 291 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
           |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 975 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 916

                               
Query: 351 gtaattgctctgcacccacc 370
           | | || |||||||||||||
Sbjct: 915 gaacttcctctgcacccacc 896
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>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full
           insert sequence
          Length = 634

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                       
Query: 291 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
           |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 401 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 342

                               
Query: 351 gtaattgctctgcacccacc 370
           | | || |||||||||||||
Sbjct: 341 gaacttcctctgcacccacc 322
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>gb|AY103891.1| Zea mays PCO065722 mRNA sequence
          Length = 1280

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                       
Query: 291 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 350
           |||||||||||| |||||||  | || |||||||| ||| | ||||||||||||||||||
Sbjct: 995 gcactcggcgggcacgccctgcgggaagcgcttggcgtcggcgcagtagttgtagatcat 936

                                   
Query: 351 gtaattgctctgcacccaccgcat 374
           | | |||| ||||||||| |||||
Sbjct: 935 gaacttgcgctgcacccagcgcat 912
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>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence
          Length = 977

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 319 cgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaccgcat 374
           ||||||| ||| ||||||||||||||||||||| | || ||||||||||| |||||
Sbjct: 263 cgcttggcgtcggtgcagtagttgtagatcatgaacttcctctgcacccagcgcat 318
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>gb|AY106776.1| Zea mays PCO076978 mRNA sequence
          Length = 974

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 319 cgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaccgcat 374
           ||||||| ||| ||||||||||||||||||||| | || ||||||||||| |||||
Sbjct: 941 cgcttggcgtcggtgcagtagttgtagatcatgaacttcctctgcacccagcgcat 886
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>gb|DQ100340.1| Eucalyptus globulus putative xyloglucan
           endotransglycosylase/hydrolase (XTH4) mRNA, partial cds
          Length = 608

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 318 gcgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccac 369
           |||||||| ||| | |||||||||||| |||||||||||  |||||||||||
Sbjct: 398 gcgcttggtgtcggcgcagtagttgtatatcatgtaattcttctgcacccac 347
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>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1181

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 331  gtgcagtagttgtagatcatgtaattgctctgcacccaccgcat 374
            ||||||||||||||||||||||  |||| ||||||||| |||||
Sbjct: 1061 gtgcagtagttgtagatcatgtggttgcgctgcacccagcgcat 1018
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>dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein 19-1-5, complete
           cds
          Length = 1221

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 327 gtcagtgcagtagttgtagatcatgtaattgctctgcacccac 369
           ||||| |||||| |||||||||||||||||  |||||||||||
Sbjct: 913 gtcagagcagtaattgtagatcatgtaattcttctgcacccac 871
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>gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence
          Length = 765

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 319 cgcttggggtcagtgcagtagttgtagatcatgtaatt 356
           ||||||| |||||||||||| ||||| |||||||||||
Sbjct: 519 cgcttggtgtcagtgcagtaattgtaaatcatgtaatt 482
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>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2)
           mRNA, complete cds
          Length = 1375

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 327 gtcagtgcagtagttgtagatcatgtaattgctctgcaccca 368
           ||||| ||| ||||||||||||||||||||  ||||||||||
Sbjct: 866 gtcagcgcaatagttgtagatcatgtaattcttctgcaccca 825
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>emb|AJ130885.1|FSY130885 Fagus sylvatica mRNA for xyloglucan endotransglycosylase 1
          Length = 1223

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 318 gcgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccac 369
           |||||||| ||| ||||| ||||| || |||||||||||  |||||||||||
Sbjct: 874 gcgcttggtgtctgtgcaatagttataaatcatgtaatttttctgcacccac 823
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>emb|AJ555155.1|CSA555155 Cucumis sativus XTH3 gene for putative xyloglucan
            endotransglycosylase, exons 1-3, clone 4
          Length = 3074

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 327  gtcagtgcagtagttgtagatcatgta 353
            |||||||||||| ||||||||||||||
Sbjct: 2636 gtcagtgcagtaattgtagatcatgta 2610
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>emb|AJ555126.1|CSA555126 Cucumis sativus mRNA for putative xyloglucan endotransglycosylase
           (xth3 gene)
          Length = 1038

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 327 gtcagtgcagtagttgtagatcatgta 353
           |||||||||||| ||||||||||||||
Sbjct: 846 gtcagtgcagtaattgtagatcatgta 820
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>gb|AY105365.1| Zea mays PCO092487 mRNA sequence
          Length = 1253

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 331 gtgcagtagttgtagatcatgta 353
           |||||||||||||||||||||||
Sbjct: 898 gtgcagtagttgtagatcatgta 876
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>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete
           cds
          Length = 1827

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 331 gtgcagtagttgtagatcatgta 353
           |||||||||||||||||||||||
Sbjct: 913 gtgcagtagttgtagatcatgta 891
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>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete
           cds
          Length = 1221

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 331 gtgcagtagttgtagatcatgta 353
           |||||||||||||||||||||||
Sbjct: 905 gtgcagtagttgtagatcatgta 883
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>ref|XM_473787.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 882

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 332 tgcagtagttgtagatcatgta 353
           ||||||||||||||||||||||
Sbjct: 829 tgcagtagttgtagatcatgta 808
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>gb|AY365421.1| Sesamum indicum xyloglucan endotransglycosylase mRNA, partial cds
          Length = 494

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 331 gtgcagtagttgtagatcatgt 352
           ||||||||||||||||||||||
Sbjct: 491 gtgcagtagttgtagatcatgt 470
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>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (PM5)
          Length = 1188

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 288 ggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagat 347
           ||||||||||||||||| ||| |||| || ||||  |  ||| |||||||||| ||||  
Sbjct: 904 ggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtagga 845

                         
Query: 348 catgtaattgctct 361
           |||||| |||||||
Sbjct: 844 catgtacttgctct 831
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>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA,
           complete cds
          Length = 1268

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 326 ggtcagtgcagtagttgtagat 347
           ||||||||||||||||||||||
Sbjct: 889 ggtcagtgcagtagttgtagat 868
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>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
              complete sequence
          Length = 166804

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 332    tgcagtagttgtagatcatgta 353
              ||||||||||||||||||||||
Sbjct: 141164 tgcagtagttgtagatcatgta 141185
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 332      tgcagtagttgtagatcatgta 353
                ||||||||||||||||||||||
Sbjct: 30507787 tgcagtagttgtagatcatgta 30507808
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>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full
           insert sequence
          Length = 1041

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 332 tgcagtagttgtagatcatgta 353
           ||||||||||||||||||||||
Sbjct: 892 tgcagtagttgtagatcatgta 871
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>gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hydrolase precursor
           (XTH1) mRNA, complete cds
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 327 gtcagtgcagtagttgtagat 347
           |||||||||||||||||||||
Sbjct: 813 gtcagtgcagtagttgtagat 793
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>emb|AL591304.1| Human DNA sequence from clone RP11-21G12 on chromosome 6, complete
             sequence
          Length = 35013

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 40    aaaaacaaacacatgaagaacagaa 64
             ||||||||||||||||| |||||||
Sbjct: 27216 aaaaacaaacacatgaacaacagaa 27240
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 42      aaacaaacacatgaagaacag 62
               |||||||||||||||||||||
Sbjct: 6009611 aaacaaacacatgaagaacag 6009631



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 42      aaacaaacacatgaagaacag 62
               |||||||||||||||||||||
Sbjct: 6003871 aaacaaacacatgaagaacag 6003851
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>gb|AC087896.15|AC087896 Homo sapiens 12q BAC RP11-777K21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 183562

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 40     aaaaacaaacacatgaagaacagaa 64
              ||||||||||||||||| |||||||
Sbjct: 144429 aaaaacaaacacatgaacaacagaa 144405
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>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1003_F05
          Length = 147472

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    aaacaaacacatgaagaacag 62
             |||||||||||||||||||||
Sbjct: 30450 aaacaaacacatgaagaacag 30470



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    aaacaaacacatgaagaacag 62
             |||||||||||||||||||||
Sbjct: 24710 aaacaaacacatgaagaacag 24690
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>gb|BC090193.1| Xenopus laevis cDNA clone MGC:85054 IMAGE:6327047, complete cds
          Length = 1785

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 158  tggtccttatttatcatacag 178
            |||||||||||||||||||||
Sbjct: 1462 tggtccttatttatcatacag 1442
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>dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1712

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 327  gtcagtgcagtagttgtagat 347
            |||||||||||||||||||||
Sbjct: 1450 gtcagtgcagtagttgtagat 1430
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>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA,
           complete cds
          Length = 1130

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 327 gtcagtgcagtagttgtagat 347
           |||||||||||||||||||||
Sbjct: 872 gtcagtgcagtagttgtagat 852
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>dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferase, partial cds
          Length = 975

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 327 gtcagtgcagtagttgtagat 347
           |||||||||||||||||||||
Sbjct: 833 gtcagtgcagtagttgtagat 813
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>gb|AC113970.8| Mus musculus chromosome 1, clone RP23-125E16, complete sequence
          Length = 235703

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    aaaaacaaacacatgaagaa 59
             ||||||||||||||||||||
Sbjct: 83070 aaaaacaaacacatgaagaa 83051
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>emb|AL590111.14| Human DNA sequence from clone RP11-570F3 on chromosome 10 Contains
            part of a novel gene (FLJ30499) and the 3' end of a novel
            gene (FLJ30450), complete sequence
          Length = 41069

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  ctcactggtccttatttatc 172
            ||||||||||||||||||||
Sbjct: 3262 ctcactggtccttatttatc 3243
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>emb|BX571768.19| Zebrafish DNA sequence from clone DKEYP-2C4 in linkage group 11,
             complete sequence
          Length = 111222

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   tatttatcatacagtacaat 184
             ||||||||||||||||||||
Sbjct: 36635 tatttatcatacagtacaat 36616
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    cccggccgtcttcctccggc 228
              ||||||||||||||||||||
Sbjct: 951280 cccggccgtcttcctccggc 951261
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>gb|AC148685.1| Macaca mulatta Major Histocompatibility Complex BAC MMU188J04, complete
             sequence
          Length = 166821

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   gggactacatggagcactcg 297
             ||||||||||||||||||||
Sbjct: 22059 gggactacatggagcactcg 22040
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 355     ttgctctgcacccaccgcat 374
               ||||||||||||||||||||
Sbjct: 4951256 ttgctctgcacccaccgcat 4951237
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>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1012G11
          Length = 167168

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    ttgctctgcacccaccgcat 374
              ||||||||||||||||||||
Sbjct: 133788 ttgctctgcacccaccgcat 133769
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>dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1913

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 328  tcagtgcagtagttgtagat 347
            ||||||||||||||||||||
Sbjct: 1610 tcagtgcagtagttgtagat 1591
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>gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan endotransglycosylase
           precursor (XET) mRNA, complete cds
          Length = 1178

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 tcagtgcagtagttgtagat 347
           ||||||||||||||||||||
Sbjct: 858 tcagtgcagtagttgtagat 839
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>emb|AL845486.6| Mouse DNA sequence from clone RP23-236H7 on chromosome 2, complete
              sequence
          Length = 198481

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     ggatcagagaaaaacaaaca 50
              ||||||||||||||||||||
Sbjct: 102656 ggatcagagaaaaacaaaca 102675
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>dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transferase, complete cds
          Length = 1319

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 tcagtgcagtagttgtagat 347
           ||||||||||||||||||||
Sbjct: 999 tcagtgcagtagttgtagat 980


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,694,181
Number of Sequences: 3902068
Number of extensions: 3694181
Number of successful extensions: 67935
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 67766
Number of HSP's gapped (non-prelim): 170
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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