ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet72g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1MYG_GALCR (P02168) Myoglobin 30 1.7
2MYG_LEPMU (P02169) Myoglobin 29 3.0
3Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-) 29 3.0
4MYG_ORYAF (P02164) Myoglobin 28 5.1
5OPSD_BUFBU (P56514) Rhodopsin 28 6.6
6YJK8_YEAST (P42946) Hypothetical 41.5 kDa protein in GZF3-IME2 i... 28 6.6
7MYG_NYCCO (P02167) Myoglobin 28 6.6
8OPSD_BUFMA (P56515) Rhodopsin 28 8.7
9MYOF_HUMAN (Q9NZM1) Myoferlin (Fer-1-like protein 3) 28 8.7
10MYG_PREEN (P68085) Myoglobin 28 8.7
11MYG_PONPY (P02148) Myoglobin 28 8.7
12MYG_PERPO (P02166) Myoglobin 28 8.7
13MYG_PAPAN (P68084) Myoglobin 28 8.7
14MYG_PANTR (P02145) Myoglobin 28 8.7
15MYG_HYLSY (P62735) Myoglobin 28 8.7
16MYG_HYLAG (P62734) Myoglobin 28 8.7
17MYG_HUMAN (P02144) Myoglobin 28 8.7
18MYG_GORBE (P02147) Myoglobin 28 8.7
19MYG_ERYPA (P68086) Myoglobin 28 8.7
20GDF5_MOUSE (P43027) Growth/differentiation factor 5 precursor (G... 28 8.7
21GDF5_HUMAN (P43026) Growth/differentiation factor 5 precursor (G... 28 8.7 
>MYG_GALCR (P02168) Myoglobin|
          Length = 153

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 56  TADEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           TADE +   D +K   TVL A+GG +     HE  I  +   +QSH
Sbjct: 51  TADEMKASEDLKKHGVTVLTALGGILKKKGQHEAEIKPL---AQSH 93
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>MYG_LEPMU (P02169) Myoglobin|
          Length = 153

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 56  TADEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           TADE +   D +K   TVL A+GG +     HE  +  +   +QSH
Sbjct: 51  TADEMKASEDLKKHGTTVLTALGGILKKKGQHEAELKPL---AQSH 93
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>Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)|
          Length = 412

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 74  TKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQS 190
           TK    K+ A    A+GG    YT HE ++Y+    S++
Sbjct: 59  TKTRTAKQIAEAFDAIGGHFNAYTGHENTVYYARVLSEN 97
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>MYG_ORYAF (P02164) Myoglobin|
          Length = 153

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 56  TADEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           T DE +   D +K   TVL A+GG +     HE  I  +   +QSH
Sbjct: 51  TEDEMKASEDLKKHGTTVLTALGGILKKKGQHEAEIQPL---AQSH 93
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>OPSD_BUFBU (P56514) Rhodopsin|
          Length = 354

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -2

Query: 110 EPWRFSFVCPFLFLVHLL 57
           EPW++S +C ++FL+ LL
Sbjct: 33  EPWQYSILCAYMFLLILL 50
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>YJK8_YEAST (P42946) Hypothetical 41.5 kDa protein in GZF3-IME2 intergenic|
           region
          Length = 383

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -2

Query: 161 WTFHGLYNQSRCPRQRKEPW-RFSFVCPFLFLVHLL 57
           W +H   N+  CP Q   PW RF FV  F   + LL
Sbjct: 203 WMYHNATNEISCP-QLISPWFRFLFVPAFTISISLL 237
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>MYG_NYCCO (P02167) Myoglobin|
          Length = 153

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 56  TADEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           T DE +   D +K   TVL A+GG +     HE  I  +   +QSH
Sbjct: 51  TPDEMKASEDLKKHGVTVLTALGGILKKKGQHEAEIKPL---AQSH 93
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>OPSD_BUFMA (P56515) Rhodopsin|
          Length = 354

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -2

Query: 110 EPWRFSFVCPFLFLVHLL 57
           EPW++S +C ++FL+ LL
Sbjct: 33  EPWQYSVLCAYMFLLILL 50
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>MYOF_HUMAN (Q9NZM1) Myoferlin (Fer-1-like protein 3)|
          Length = 2061

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 56   TADEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHV 172
            T D  E  +++QK SAT +F     +         IYH+
Sbjct: 1103 TEDGDEKSLEKQKHSATTVFGANTPIVSCNFDRVYIYHL 1141
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>MYG_PREEN (P68085) Myoglobin|
          Length = 153

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 62  DEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           DE +   D +K  ATVL A+GG +     HE  I  +   +QSH
Sbjct: 53  DEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPL---AQSH 93
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>MYG_PONPY (P02148) Myoglobin|
          Length = 153

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 62  DEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           DE +   D +K  ATVL A+GG +     HE  I  +   +QSH
Sbjct: 53  DEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPL---AQSH 93
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>MYG_PERPO (P02166) Myoglobin|
          Length = 153

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 56  TADEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           T DE +   D +K   TVL A+GG +     HE  I  +   +QSH
Sbjct: 51  TPDEMKASEDLKKHGVTVLTALGGILKKKGHHEAEIKPL---AQSH 93
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>MYG_PAPAN (P68084) Myoglobin|
          Length = 153

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 62  DEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           DE +   D +K  ATVL A+GG +     HE  I  +   +QSH
Sbjct: 53  DEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPL---AQSH 93
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>MYG_PANTR (P02145) Myoglobin|
          Length = 153

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 62  DEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           DE +   D +K  ATVL A+GG +     HE  I  +   +QSH
Sbjct: 53  DEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPL---AQSH 93
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>MYG_HYLSY (P62735) Myoglobin|
          Length = 153

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 62  DEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           DE +   D +K  ATVL A+GG +     HE  I  +   +QSH
Sbjct: 53  DEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPL---AQSH 93
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>MYG_HYLAG (P62734) Myoglobin|
          Length = 153

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 62  DEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           DE +   D +K  ATVL A+GG +     HE  I  +   +QSH
Sbjct: 53  DEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPL---AQSH 93
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>MYG_HUMAN (P02144) Myoglobin|
          Length = 153

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 62  DEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           DE +   D +K  ATVL A+GG +     HE  I  +   +QSH
Sbjct: 53  DEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPL---AQSH 93
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>MYG_GORBE (P02147) Myoglobin|
          Length = 153

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 62  DEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           DE +   D +K  ATVL A+GG +     HE  I  +   +QSH
Sbjct: 53  DEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPL---AQSH 93
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>MYG_ERYPA (P68086) Myoglobin|
          Length = 153

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 62  DEPETKMDRQKRSATVLFAVGGTVTGYTSHETSIYHVIYSSQSH 193
           DE +   D +K  ATVL A+GG +     HE  I  +   +QSH
Sbjct: 53  DEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPL---AQSH 93
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>GDF5_MOUSE (P43027) Growth/differentiation factor 5 precursor (GDF-5)|
          Length = 495

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 125 PRQRKEPWRFSFVCPFLFLVHLL*TSSCSDANTGNRNCRL 6
           PR+ KEP+R   + P  +++ L  T S +D   GN + +L
Sbjct: 149 PREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGNSSVKL 188
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>GDF5_HUMAN (P43026) Growth/differentiation factor 5 precursor (GDF-5)|
           (Cartilage-derived morphogenetic protein 1) (CDMP-1)
           (Radotermin)
          Length = 501

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 125 PRQRKEPWRFSFVCPFLFLVHLL*TSSCSDANTGNRNCRL 6
           PR+ KEP+R   + P  +++ L  T S +D   GN + +L
Sbjct: 155 PREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGNSSVKL 194


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,420,540
Number of Sequences: 219361
Number of extensions: 476419
Number of successful extensions: 1376
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 80,573,946
effective HSP length: 40
effective length of database: 71,799,506
effective search space used: 1723188144
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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