>RPO1_MIMIV (Q7T6X5) DNA-directed RNA polymerase subunit 1 (EC 2.7.7.6)|
          Length = 1495

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 5   QKNHTDITNICKKKVHCDTHTHGSACPSH 91
           ++   +I +ICKK  HC    +G   P+H
Sbjct: 140 KQRFAEIRSICKKVTHCQKENYGCGTPAH 168


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,443,532
Number of Sequences: 219361
Number of extensions: 667997
Number of successful extensions: 2057
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2057
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)