>emb|AL805927.4| Mouse DNA sequence from clone RP24-221D22 on chromosome 4 Contains a
             novel pseudogene, complete sequence
          Length = 141669

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 27    atattggagaaaagaagccaaa 48
             ||||||||||||||||||||||
Sbjct: 30933 atattggagaaaagaagccaaa 30912

>emb|BX927248.6| Zebrafish DNA sequence from clone CH211-140C22 in linkage group 6,
             complete sequence
          Length = 81373

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 30    ttggagaaaagaagccaaacatttt 54
             |||||||||||||||| ||||||||
Sbjct: 65234 ttggagaaaagaagcccaacatttt 65258

>dbj|AP005431.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-193E15, complete
              sequence
          Length = 177785

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 24     tatatattggagaaaagaagc 44
              |||||||||||||||||||||
Sbjct: 132421 tatatattggagaaaagaagc 132401

>ref|XM_757125.1| Ustilago maydis 521 hypothetical protein (UM06071.1) partial mRNA
          Length = 1830

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  ggagaaaagaagccaaacat 51
           ||||||||||||||||||||
Sbjct: 569 ggagaaaagaagccaaacat 550

>gb|AC116853.12| Mus musculus chromosome 1, clone RP24-400M20, complete sequence
          Length = 188514

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    tatatattggagaaaagaa 42
             |||||||||||||||||||
Sbjct: 66327 tatatattggagaaaagaa 66309

>gb|AC005740.1| Homo sapiens chromosome 5p, BAC clone 50g21 (LBNL H154), complete
              sequence
          Length = 186780

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     tggagaaaagaagccaaac 49
              |||||||||||||||||||
Sbjct: 135293 tggagaaaagaagccaaac 135311

>gb|AC131977.8| Mus musculus chromosome 10, clone RP24-151B6, complete sequence
          Length = 146010

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     tatattggagaaaagaagc 44
              |||||||||||||||||||
Sbjct: 132327 tatattggagaaaagaagc 132309

>emb|BX088548.10| Zebrafish DNA sequence from clone CH211-188E4, complete sequence
          Length = 152713

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 127   actgacgaagcctaaataaaaca 149
             ||||||| |||||||||||||||
Sbjct: 57273 actgacgcagcctaaataaaaca 57295

>ref|XM_670668.1| Plasmodium berghei strain ANKA hypothetical protein
          (PB000697.00.0) partial mRNA
          Length = 795

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 23 ctatatattggagaaaaga 41
          |||||||||||||||||||
Sbjct: 26 ctatatattggagaaaaga 8

>gb|AC102593.8| Mus musculus chromosome 10, clone RP23-341M12, complete sequence
          Length = 212025

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     tatattggagaaaagaagc 44
              |||||||||||||||||||
Sbjct: 119252 tatattggagaaaagaagc 119270

>emb|AL163249.2|HS21C049 Homo sapiens chromosome 21 segment HS21C049
          Length = 340000

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    atgtctatatattggagaa 37
             |||||||||||||||||||
Sbjct: 11845 atgtctatatattggagaa 11863

>emb|BX950192.10| Zebrafish DNA sequence from clone CH211-173E20 in linkage group 17,
              complete sequence
          Length = 135523

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 36     aaaagaagccaaacatttt 54
              |||||||||||||||||||
Sbjct: 128933 aaaagaagccaaacatttt 128915

>emb|AL603838.6| Human DNA sequence from clone RP11-35D17 on chromosome 1 Contains part
             of the PTPN14 gene for protein tyrosine phosphatase,
             non-receptor type 14 protein, complete sequence
          Length = 35016

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    ccaaacattttctcattag 62
             |||||||||||||||||||
Sbjct: 24777 ccaaacattttctcattag 24795

>gb|AF129075.3| Homo sapiens chromosome 21 clone RP1-100J12, Rp1-P79E4 map q21.3-22.11,
             complete sequence
          Length = 190837

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    atgtctatatattggagaa 37
             |||||||||||||||||||
Sbjct: 10256 atgtctatatattggagaa 10274

>emb|AL136532.22| Human DNA sequence from clone RP11-379F14 on chromosome 20 Contains the
             MRPS16P gene for mitochondrial ribosomal protein S16
             pseudogene, complete sequence
          Length = 94387

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    aaaagaagccaaacatttt 54
             |||||||||||||||||||
Sbjct: 16742 aaaagaagccaaacatttt 16760

>emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in linkage group 25,
             complete sequence
          Length = 181165

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 127   actgacgaagcctaaataaaaca 149
             ||||||| |||||||||||||||
Sbjct: 21947 actgacgtagcctaaataaaaca 21925

>gb|AC022821.9| Homo sapiens chromosome 8, clone RP11-51M18, complete sequence
          Length = 171721

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    agccaaacattttctcatt 60
             |||||||||||||||||||
Sbjct: 61354 agccaaacattttctcatt 61336

>gb|AC009352.5| Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone
              BACR11M13, complete sequence
          Length = 190301

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      agcaaatcaagttcagatg 21
              |||||||||||||||||||
Sbjct: 105779 agcaaatcaagttcagatg 105761

>gb|AC016879.6| Homo sapiens chromosome 8, clone RP11-97P19, complete sequence
          Length = 182556

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    agccaaacattttctcatt 60
             |||||||||||||||||||
Sbjct: 28121 agccaaacattttctcatt 28139

>emb|BX664714.16| Zebrafish DNA sequence from clone DKEY-204C3 in linkage group 7, complete
              sequence
          Length = 159633

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     ggagaaaagaagccaaaca 50
              |||||||||||||||||||
Sbjct: 100351 ggagaaaagaagccaaaca 100333

>gb|AC008332.11|AC008332 Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone
             BACR48D10, complete sequence
          Length = 153250

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     agcaaatcaagttcagatg 21
             |||||||||||||||||||
Sbjct: 45967 agcaaatcaagttcagatg 45949

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 24       tatatattggagaaaagaa 42
                |||||||||||||||||||
Sbjct: 11777962 tatatattggagaaaagaa 11777980

>gb|AC116104.7| Mus musculus chromosome 5, clone RP23-18K20, complete sequence
          Length = 210459

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     ctatatattggagaaaaga 41
              |||||||||||||||||||
Sbjct: 131932 ctatatattggagaaaaga 131950

>gb|AC096728.3| Homo sapiens BAC clone RP11-53C16 from 4, complete sequence
          Length = 82696

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    ttggagaaaagaagccaaa 48
             |||||||||||||||||||
Sbjct: 19390 ttggagaaaagaagccaaa 19408

>gb|AC010102.3|AC010102 Homo sapiens BAC clone RP11-486B15 from 2, complete sequence
          Length = 230827

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     aaaagaagccaaacatttt 54
              |||||||||||||||||||
Sbjct: 155876 aaaagaagccaaacatttt 155894

>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     attggagaaaagaagccaa 47
              |||||||||||||||||||
Sbjct: 238301 attggagaaaagaagccaa 238283

>dbj|BS000169.1| Pan troglodytes chromosome 22 clone:RP43-042E01, map 22, complete
              sequences
          Length = 228269

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     atgtctatatattggagaa 37
              |||||||||||||||||||
Sbjct: 200063 atgtctatatattggagaa 200081

>emb|BX005320.4| Zebrafish DNA sequence from clone DKEY-27P3, complete sequence
          Length = 142827

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    aaaagaagccaaacatttt 54
             |||||||||||||||||||
Sbjct: 25851 aaaagaagccaaacatttt 25869

>gb|AC157891.3| Medicago truncatula chromosome 7 BAC clone mte1-1i2, complete sequence
          Length = 154095

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 8      atcaagttcagatgtctat 26
              |||||||||||||||||||
Sbjct: 114558 atcaagttcagatgtctat 114540

>emb|CT009613.14| Mouse DNA sequence from clone RP23-55L9 on chromosome 12, complete
             sequence
          Length = 214861

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 121   gatctgactgacgaagcctaaataaaa 147
             ||||||||| | |||||||||||||||
Sbjct: 79609 gatctgactcaggaagcctaaataaaa 79635

>gb|AE003638.2| Drosophila melanogaster chromosome 2L, section 47 of 83 of the complete
             sequence
          Length = 254309

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     agcaaatcaagttcagatg 21
             |||||||||||||||||||
Sbjct: 49215 agcaaatcaagttcagatg 49197

>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 131    acgaagcctaaataaaaca 149
              |||||||||||||||||||
Sbjct: 736398 acgaagcctaaataaaaca 736380

>emb|AL929161.10| Zebrafish DNA sequence from clone CH211-93A19, complete sequence
          Length = 197027

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     ggagaaaagaagccaaaca 50
              |||||||||||||||||||
Sbjct: 119636 ggagaaaagaagccaaaca 119618

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 24       tatatattggagaaaagaa 42
                |||||||||||||||||||
Sbjct: 11777633 tatatattggagaaaagaa 11777651

>gb|AC171335.1| Mus musculus BAC clone RP23-2K15 from chromosome 12, complete sequence
          Length = 180226

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 121   gatctgactgacgaagcctaaataaaa 147
             ||||||||| | |||||||||||||||
Sbjct: 55372 gatctgactcaggaagcctaaataaaa 55346


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,783,868
Number of Sequences: 3902068
Number of extensions: 1783868
Number of successful extensions: 122492
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122288
Number of HSP's gapped (non-prelim): 204
length of query: 149
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 128
effective length of database: 17,151,101,840
effective search space: 2195341035520
effective search space used: 2195341035520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)