| Clone Name | rbaet71h06 |
|---|---|
| Clone Library Name | barley_pub |
>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 626 Score = 30.4 bits (67), Expect = 1.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 Query: 321 PLVRTSSESTVSCSGKAPEGAIPGPSP 401 P V S+E + C G +PE PGP+P Sbjct: 458 PAVGPSAEEKMECEGSSPEPEPPGPAP 484
>FOXQ1_MOUSE (O70220) Forkhead box protein Q1 (Hepatocyte nuclear factor 3| forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1) (HFH-1l) Length = 400 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/33 (51%), Positives = 19/33 (57%) Frame = +3 Query: 330 RTSSESTVSCSGKAPEGAIPGPSPGRHAATPLA 428 R S +TVS SG PE A PGP+ G A P A Sbjct: 211 RLSHRTTVSASGLRPEEAPPGPA-GTPQAAPAA 242
>PYRB3_PEA (Q43064) Aspartate carbamoyltransferase 3, chloroplast precursor| (EC 2.1.3.2) (Aspartate transcarbamylase 3) (ATCase 3) Length = 391 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -2 Query: 421 GVAACRPGDGPGIAPSGAFPEHETVDSELVRTRGIRL 311 G+ GDGPG PS A + T++ E+ + GI++ Sbjct: 203 GIPIVNAGDGPGQHPSQALLDVYTIEREIGKLDGIKV 239
>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low| density lipoprotein receptor defect B-complementing protein) Length = 980 Score = 28.9 bits (63), Expect = 5.4 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -1 Query: 110 SLSTIQRNHSQGNGLGGISGERRPC 36 +L T+ R H G G+G + GE + C Sbjct: 293 TLETVTRQHPTGKGIGALQGEMKLC 317
>PYRB2_PEA (Q43087) Aspartate carbamoyltransferase 2, chloroplast precursor| (EC 2.1.3.2) (Aspartate transcarbamylase 2) (ATCase 2) Length = 385 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -2 Query: 421 GVAACRPGDGPGIAPSGAFPEHETVDSELVRTRGIRL 311 G+ GDGPG PS A + T++ E+ + GI++ Sbjct: 197 GIPIVNAGDGPGQHPSQALLDVYTIEREIGKLDGIKV 233
>TESK1_RAT (Q63572) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 628 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +3 Query: 327 VRTSSESTVSCSGKAPEGAIPGPSP 401 V S+E + C G +PE PGP+P Sbjct: 462 VGPSTEERMDCEGSSPEPEPPGPAP 486
>TECT3_HUMAN (Q6NUS6) Tectonic 3 precursor| Length = 607 Score = 28.1 bits (61), Expect = 9.2 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 5/79 (6%) Frame = -3 Query: 417 SPRAGR-GTDRESPLRELSPSMKQSTQNWYGQGESDCLIKTKHC----DGPRGCWRNVIS 253 SPR+G G PL L+ + S QG C +K + GC + Sbjct: 377 SPRSGNPGYIVGKPLLALTDDISYSMTLLQSQGNGSCSVKRHEVQFGVNAISGCKLRLKK 436 Query: 252 AQCSECQSEEIQPSAGKRR 196 A CS Q E Q G+ R Sbjct: 437 ADCSHLQQEIYQTLHGRPR 455
>GAP_CAEEL (P34288) GTPase-activating protein GAP (CeGAP)| Length = 1317 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +3 Query: 321 PLVRTSSESTVSCSGKAPEGAIPGPSPGRHAAT 419 P+ TSS S++S SG+A A+ + G AAT Sbjct: 129 PVFTTSSTSSISTSGEASSTAVAAAAAGSVAAT 161
>TTC3_HUMAN (P53804) Tetratricopeptide repeat protein 3 (TPR repeat protein 3)| (TPR repeat protein D) Length = 2025 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 Query: 363 GKAPEGAIPGPSPGRHAATPL 425 G+AP +PGP PG+ AT L Sbjct: 1784 GEAPSALLPGPPPGQPEATQL 1804
>CORIN_HUMAN (Q9Y5Q5) Atrial natriuteric peptide-converting enzyme (EC 3.4.21.-)| (pro-ANP-converting enzyme) (Corin) (Heart-specific serine proteinase ATC2) (Transmembrane protease, serine 10) Length = 1042 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = -3 Query: 336 WYGQGESDCLIKTKHCDGPRGCWRNVISAQCSECQSEEIQ 217 W CL T CDG C + CS CQ +E++ Sbjct: 622 WECPSNKQCLKHTVICDGFPDCPDYMDEKNCSFCQDDELE 661
>ATT_APLFA (Q7M459) Attractin| Length = 58 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = -3 Query: 330 GQGESDCLIKTKHCDGPRGCWRNVISAQC-----SECQSEEIQPSAG 205 G S C ++ ++CD GC N I +C CQ++E + ++G Sbjct: 7 GNITSQCEMQHQNCDDANGC--NTIIEECKTSMVERCQNQEFESASG 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,049,538 Number of Sequences: 219361 Number of extensions: 1313527 Number of successful extensions: 4355 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4080 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4351 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)