ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet71h05 |
|---|---|
| Clone Library Name | barley_pub |
>XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hydrolase protein| 23 precursor (EC 2.4.1.207) (At-XTH23) (XTH-23) Length = 286 Score = 58.2 bits (139), Expect = 5e-09 Identities = 23/28 (82%), Positives = 25/28 (89%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 MRWVQ+NYMIYNYCTD KRF QG+P EC Sbjct: 256 MRWVQNNYMIYNYCTDAKRFPQGLPREC 283
>XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase protein 22| precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch protein 4) Length = 284 Score = 57.4 bits (137), Expect = 8e-09 Identities = 23/28 (82%), Positives = 24/28 (85%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 MRWVQ NYMIYNYCTD KRF QG+P EC Sbjct: 254 MRWVQRNYMIYNYCTDAKRFPQGLPKEC 281
>XTH13_ARATH (Q9FKL8) Putative xyloglucan endotransglucosylase/hydrolase protein| 13 precursor (EC 2.4.1.207) (At-XTH13) (XTH-13) Length = 284 Score = 55.1 bits (131), Expect = 4e-08 Identities = 21/30 (70%), Positives = 26/30 (86%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECSM 268 M+WVQ +YMIYNYCTD KRF QG+P EC++ Sbjct: 254 MKWVQDDYMIYNYCTDFKRFPQGLPTECNL 283
>XTH12_ARATH (Q9FKL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 12 precursor (EC 2.4.1.207) (At-XTH12) (XTH-12) Length = 285 Score = 53.9 bits (128), Expect = 9e-08 Identities = 20/30 (66%), Positives = 26/30 (86%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECSM 268 ++WVQ +YMIYNYCTD KRF QG+P EC++ Sbjct: 255 LKWVQKDYMIYNYCTDFKRFPQGLPTECNL 284
>XTH24_ARATH (P24806) Xyloglucan endotransglucosylase/hydrolase protein 24| precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase) Length = 269 Score = 53.9 bits (128), Expect = 9e-08 Identities = 20/29 (68%), Positives = 24/29 (82%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 ++WVQ NYMIYNYCTD +RF QG P EC+ Sbjct: 238 LKWVQKNYMIYNYCTDHRRFPQGAPKECT 266
>BRU1_SOYBN (P35694) Brassinosteroid-regulated protein BRU1 precursor| Length = 283 Score = 51.6 bits (122), Expect = 5e-07 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 +RWVQ +MIYNYC+D KRF QG+PAEC Sbjct: 254 LRWVQKYFMIYNYCSDLKRFPQGLPAEC 281
>XTH20_ARATH (Q9FI31) Probable xyloglucan endotransglucosylase/hydrolase protein| 20 precursor (EC 2.4.1.207) (At-XTH20) (XTH-20) Length = 282 Score = 51.6 bits (122), Expect = 5e-07 Identities = 19/29 (65%), Positives = 22/29 (75%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 ++W Q YM+YNYCTD KRF QG P ECS Sbjct: 254 VKWAQRKYMVYNYCTDKKRFPQGAPPECS 282
>XTH17_ARATH (O80803) Probable xyloglucan endotransglucosylase/hydrolase protein| 17 precursor (EC 2.4.1.207) (At-XTH17) (XTH-17) Length = 282 Score = 51.6 bits (122), Expect = 5e-07 Identities = 21/29 (72%), Positives = 25/29 (86%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 M+ VQS YMIYNYCTD +RF +GVPAEC+ Sbjct: 254 MKGVQSKYMIYNYCTDKRRFPRGVPAECT 282
>XTH14_ARATH (Q9ZSU4) Xyloglucan endotransglucosylase/hydrolase protein 14| precursor (EC 2.4.1.207) (At-XTH14) (XTH-14) Length = 287 Score = 51.2 bits (121), Expect = 6e-07 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECSM 268 M WVQ ++MIYNYCTD KRF QG+P EC + Sbjct: 258 MMWVQRDFMIYNYCTDFKRFPQGLPKECKL 287
>XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hydrolase protein| 19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19) Length = 277 Score = 50.1 bits (118), Expect = 1e-06 Identities = 20/29 (68%), Positives = 24/29 (82%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 M+ VQS YM+YNYC+D KRF +GVP ECS Sbjct: 249 MKGVQSKYMVYNYCSDKKRFPRGVPPECS 277
>XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hydrolase protein| 21 precursor (EC 2.4.1.207) (At-XTH21) (XTH-21) Length = 305 Score = 49.3 bits (116), Expect = 2e-06 Identities = 17/29 (58%), Positives = 23/29 (79%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 +RWVQ +M+YNYC D KRF+ G+P EC+ Sbjct: 269 LRWVQRKFMVYNYCKDKKRFSNGLPVECT 297
>XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hydrolase protein| 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) Length = 284 Score = 48.9 bits (115), Expect = 3e-06 Identities = 21/28 (75%), Positives = 21/28 (75%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 MR VQ YMIYNYCTD KRF QG P EC Sbjct: 255 MRVVQRKYMIYNYCTDTKRFPQGFPKEC 282
>XTH18_ARATH (Q9M0D2) Probable xyloglucan endotransglucosylase/hydrolase protein| 18 precursor (EC 2.4.1.207) (At-XTH18) (XTH-18) Length = 282 Score = 48.9 bits (115), Expect = 3e-06 Identities = 19/29 (65%), Positives = 23/29 (79%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 M+ VQS YM+YNYC D +RF +GVP ECS Sbjct: 254 MKGVQSKYMVYNYCNDKRRFPRGVPVECS 282
>XTH15_ARATH (Q38911) Probable xyloglucan endotransglucosylase/hydrolase protein| 15 precursor (EC 2.4.1.207) (At-XTH15) (XTH-15) Length = 289 Score = 47.4 bits (111), Expect = 9e-06 Identities = 18/28 (64%), Positives = 22/28 (78%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 +RWVQ +MIYNYC+D KRF +G P EC Sbjct: 257 LRWVQKYFMIYNYCSDLKRFPRGFPPEC 284
>XTH16_ARATH (Q8LG58) Probable xyloglucan endotransglucosylase/hydrolase protein| 16 precursor (EC 2.4.1.207) (At-XTH16) (XTH-16) Length = 291 Score = 47.0 bits (110), Expect = 1e-05 Identities = 18/28 (64%), Positives = 22/28 (78%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 +RWVQ +MIY+YC+D KRF QG P EC Sbjct: 259 LRWVQKYFMIYDYCSDLKRFPQGFPPEC 286
>XTH8_ORYSA (Q76BW5) Xyloglucan endotransglycosylase/hydrolase protein 8| precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5) Length = 290 Score = 44.3 bits (103), Expect = 7e-05 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = -3 Query: 351 WVQSNYMIYNYCTDPKRFAQGVPAEC 274 W + NYM YNYC D RF QG PAEC Sbjct: 262 WAERNYMSYNYCADGWRFPQGFPAEC 287
>XTH_SOYBN (Q39857) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) (Fragment) Length = 295 Score = 42.4 bits (98), Expect = 3e-04 Identities = 16/28 (57%), Positives = 19/28 (67%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 +RWV+ Y IYNYCTD KR+ P EC Sbjct: 262 LRWVRQKYTIYNYCTDTKRYPHISPPEC 289
>XTHA_PHAAN (Q41638) Xyloglucan endotransglucosylase/hydrolase protein A| precursor (EC 2.4.1.207) (VaXTH1) Length = 292 Score = 42.4 bits (98), Expect = 3e-04 Identities = 17/29 (58%), Positives = 23/29 (79%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 + WV++ Y IYNYCTD KR++Q VP EC+ Sbjct: 260 LAWVRNKYTIYNYCTDRKRYSQ-VPPECT 287
>XTH_TOBAC (P93349) Probable xyloglucan endotransglucosylase/hydrolase protein| precursor (EC 2.4.1.207) Length = 295 Score = 40.0 bits (92), Expect = 0.001 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 +RWV+ Y IYNYCTD KR+ +P EC+ Sbjct: 263 LRWVRQKYTIYNYCTDRKRYPT-LPPECT 290
>XTH7_ARATH (Q8LER3) Probable xyloglucan endotransglucosylase/hydrolase protein| 7 precursor (EC 2.4.1.207) (At-XTH7) (XTH-7) Length = 293 Score = 38.1 bits (87), Expect = 0.005 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = -3 Query: 354 RWVQSNYMIYNYCTDPKRFAQGVPAECS 271 RWV+ N+M+Y+YCTD RF P ECS Sbjct: 264 RWVRVNHMVYDYCTDKSRFPV-PPPECS 290
>XTHB_PHAAN (Q8LNZ5) Probable xyloglucan endotransglucosylase/hydrolase protein| B precursor (EC 2.4.1.207) (VaXTH2) Length = 293 Score = 37.0 bits (84), Expect = 0.012 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 ++WV+ + IYNYCTD R+ Q +P EC Sbjct: 261 LKWVRQKFTIYNYCTDRTRYPQ-LPPEC 287
>XTH4_ARATH (Q39099) Xyloglucan endotransglucosylase/hydrolase protein 4| precursor (EC 2.4.1.207) (At-XTH4) (XTH-4) Length = 296 Score = 36.6 bits (83), Expect = 0.016 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 ++WV+ + IYNYCTD RF +PAEC Sbjct: 264 LKWVRMKWTIYNYCTDRTRFPV-MPAEC 290
>XTH_BRAOB (Q6YDN9) Xyloglucan endotransglucosylase/hydrolase precursor (EC| 2.4.1.207) (BobXET16A) Length = 295 Score = 36.6 bits (83), Expect = 0.016 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 ++WV+ + IYNYCTD RF +PAEC Sbjct: 263 LKWVRMKWTIYNYCTDRTRFPV-MPAEC 289
>XTH1_LYCES (Q40144) Probable xyloglucan endotransglucosylase/hydrolase 1| precursor (EC 2.4.1.207) (LeXTH1) Length = 296 Score = 36.2 bits (82), Expect = 0.020 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 +RWV+ Y +YNYCTD R+ P EC+ Sbjct: 264 LRWVRQKYTVYNYCTDKARYPV-PPPECT 291
>XTH10_ARATH (Q9ZVK1) Probable xyloglucan endotransglucosylase/hydrolase protein| 10 precursor (EC 2.4.1.207) (At-XTH10) (XTH-10) Length = 299 Score = 36.2 bits (82), Expect = 0.020 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -3 Query: 354 RWVQSNYMIYNYCTDPKRFAQGVPAECSM 268 +WV+ ++IY+YC D RF +P ECS+ Sbjct: 268 KWVRKYHLIYDYCQDYGRFNNKLPKECSL 296
>XTH6_ARATH (Q8LF99) Probable xyloglucan endotransglucosylase/hydrolase protein| 6 precursor (EC 2.4.1.207) (At-XTH6) (XTH-6) Length = 292 Score = 36.2 bits (82), Expect = 0.020 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -3 Query: 354 RWVQSNYMIYNYCTDPKRFAQGVPAEC 274 RWV+ N+M+Y+YCTD RF P EC Sbjct: 265 RWVRVNHMVYDYCTDRSRFPV-PPPEC 290
>XTH31_ARATH (P93046) Probable xyloglucan endotransglucosylase/hydrolase protein| 31 precursor (EC 2.4.1.207) (At-XTH31) (XTH-31) (AtXTR8) Length = 293 Score = 35.8 bits (81), Expect = 0.026 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 + W Q N+++YNYC DPKR P EC Sbjct: 267 LTWAQRNFLVYNYCHDPKRDHTQTP-EC 293
>XTH5_ARATH (Q9XIW1) Probable xyloglucan endotransglucosylase/hydrolase protein| 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) Length = 293 Score = 35.4 bits (80), Expect = 0.035 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 ++WV+ Y IYNYCTD RF P EC Sbjct: 261 LKWVRKRYTIYNYCTDRVRFPV-PPPEC 287
>XTH32_ARATH (Q9SJL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 32 precursor (EC 2.4.1.207) (At-XTH32) (XTH-32) Length = 299 Score = 35.0 bits (79), Expect = 0.045 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKR 301 MRWVQ++ M+YNYC D KR Sbjct: 271 MRWVQTHSMVYNYCKDYKR 289
>XTH8_ARATH (Q8L9A9) Probable xyloglucan endotransglucosylase/hydrolase protein| 8 precursor (EC 2.4.1.207) (At-XTH8) (XTH-8) Length = 292 Score = 34.7 bits (78), Expect = 0.059 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = -3 Query: 351 WVQSNYMIYNYCTDPKRFAQGVPAECSM 268 WVQ N ++Y+YC D +RF +P ECS+ Sbjct: 262 WVQRNLVVYDYCKDSERFPT-LPWECSI 288
>XTH26_ARATH (Q9SVV2) Putative xyloglucan endotransglucosylase/hydrolase protein| 26 precursor (EC 2.4.1.207) (At-XTH26) (XTH-26) Length = 292 Score = 34.3 bits (77), Expect = 0.077 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 M+ ++ +MIY+YC D RF +P ECS Sbjct: 260 MQKIRDGFMIYDYCKDTNRFKGVMPPECS 288
>XTH9_ARATH (Q8LDW9) Xyloglucan endotransglucosylase/hydrolase protein 9| precursor (EC 2.4.1.207) (At-XTH9) (XTH-9) Length = 290 Score = 33.9 bits (76), Expect = 0.10 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 Query: 351 WVQSNYMIYNYCTDPKRFAQGVPAEC 274 WV++N+MIY+YC D RF P EC Sbjct: 260 WVRANHMIYDYCFDATRFPV-TPLEC 284
>XTH_WHEAT (Q41542) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) Length = 293 Score = 33.9 bits (76), Expect = 0.10 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 + WV+ + IYNYCTD R+A P EC Sbjct: 261 LAWVRKEHTIYNYCTDHDRYAAMAP-EC 287
>XTH33_ARATH (Q8LC45) Probable xyloglucan endotransglucosylase/hydrolase protein| 33 precursor (EC 2.4.1.207) (At-XTH33) (XTH-33) Length = 310 Score = 30.8 bits (68), Expect = 0.85 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAECS 271 M W + M Y+YC+D R+ + +PAEC+ Sbjct: 283 MDWARRKLMFYSYCSDKPRY-KVMPAECN 310
>XTH3_ARATH (Q9LJR7) Probable xyloglucan endotransglucosylase/hydrolase protein| 3 precursor (EC 2.4.1.207) (At-XTH3) (XTH-3) Length = 290 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -3 Query: 348 VQSNYMIYNYCTDPKRFAQGVPAEC 274 V+S YM Y+YCTD ++ Q P EC Sbjct: 266 VRSKYMNYDYCTDRSKY-QTPPREC 289
>CLUS_RABIT (Q9XSC5) Clusterin precursor (Apolipoprotein J) (Apo-J) [Contains:| Clusterin beta chain; Clusterin alpha chain] Length = 447 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 103 FTHLPVTNHY*FPFTLYRHPHLPYAPVVLLR 195 FTH P Y PF+ +R P L YA L+R Sbjct: 195 FTHKPQDTFYHSPFSYFRRPPLHYAKSRLVR 225
>S27A5_HUMAN (Q9Y2P5) Bile acyl-CoA synthetase (EC 6.2.1.7) (BACS) (Bile acid| CoA ligase) (BA-CoA ligase) (BAL) (Cholate--CoA ligase) (Very long-chain acyl-CoA synthetase homolog 2) (VLCSH2) (VLCS-H2) (Very long chain acyl-CoA synthetase-related protein) Length = 690 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = +3 Query: 162 PSSLCSGRPAQVIALCTVQC*QLCA-LARWRMDMGTTWSTRRGR 290 P+SLC+G P ++ L + LC L ++ T W GR Sbjct: 166 PASLCAGEPTALLVLASQAVPALCMWLGLAKLGCPTAWINPHGR 209
>XTH2_ARATH (Q9SV60) Putative xyloglucan endotransglucosylase/hydrolase protein| 2 precursor (EC 2.4.1.207) (At-XTH2) (XTH-2) Length = 292 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -3 Query: 357 MRWVQSNYMIYNYCTDPKRFAQGVPAEC 274 M V++ YM Y+YC+D R+ P+EC Sbjct: 262 MENVRAKYMTYDYCSDRPRYPV-PPSEC 288 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,482,394 Number of Sequences: 219361 Number of extensions: 1169741 Number of successful extensions: 2784 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2732 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2781 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
