| Clone Name | rbaet71g12 |
|---|---|
| Clone Library Name | barley_pub |
>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)| (Ath-ExpAlpha-1.1) Length = 249 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/27 (85%), Positives = 24/27 (88%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SDGRTV S NAAPAGWS+GQTF GGQF Sbjct: 222 SDGRTVVSFNAAPAGWSYGQTFAGGQF 248
>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)| (Ath-ExpAlpha-1.3) Length = 248 Score = 49.7 bits (117), Expect = 2e-06 Identities = 22/27 (81%), Positives = 22/27 (81%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SDGRTV SNN APA WSFGQTF G QF Sbjct: 221 SDGRTVVSNNIAPASWSFGQTFTGRQF 247
>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)| (Ath-ExpAlpha-1.11) Length = 253 Score = 47.4 bits (111), Expect = 9e-06 Identities = 18/27 (66%), Positives = 23/27 (85%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SDGRT+ SN+ AP+ W FGQT++GGQF Sbjct: 227 SDGRTLVSNDVAPSNWQFGQTYQGGQF 253
>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)| (AtEx14) (Ath-ExpAlpha-1.5) Length = 255 Score = 46.6 bits (109), Expect = 2e-05 Identities = 20/27 (74%), Positives = 21/27 (77%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SDGRTV SNNA P WSFGQT+ G QF Sbjct: 225 SDGRTVISNNATPRNWSFGQTYTGKQF 251
>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)| (Ath-ExpAlpha-1.2) Length = 250 Score = 45.4 bits (106), Expect = 3e-05 Identities = 19/26 (73%), Positives = 21/26 (80%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQ 277 SDG+T+ SNN A AGWSFGQTF G Q Sbjct: 223 SDGQTIVSNNVANAGWSFGQTFTGAQ 248
>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)| (Ath-ExpAlpha-1.12) Length = 255 Score = 44.7 bits (104), Expect = 6e-05 Identities = 19/27 (70%), Positives = 20/27 (74%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SDGRTV S + P W FGQTFEGGQF Sbjct: 229 SDGRTVVSYDVVPHDWQFGQTFEGGQF 255
>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)| (Ath-ExpAlpha-1.10) Length = 258 Score = 42.4 bits (98), Expect = 3e-04 Identities = 17/27 (62%), Positives = 20/27 (74%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SDGR+ TSNN AP+ W FGQT+ G F Sbjct: 230 SDGRSSTSNNIAPSNWQFGQTYSGKNF 256
>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)| (Ath-ExpAlpha-1.4) Length = 255 Score = 41.2 bits (95), Expect = 6e-04 Identities = 18/27 (66%), Positives = 20/27 (74%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SD R+V S N AP WSFGQT+ GGQF Sbjct: 227 SDRRSVVSFNVAPPTWSFGQTYTGGQF 253
>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)| (Ath-ExpAlpha-1.22) Length = 266 Score = 40.4 bits (93), Expect = 0.001 Identities = 17/27 (62%), Positives = 20/27 (74%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SD TVTS N +P W++GQTFEG QF Sbjct: 237 SDRSTVTSYNVSPKNWNYGQTFEGKQF 263
>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)| (Ath-ExpAlpha-1.9) Length = 262 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/27 (62%), Positives = 18/27 (66%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SD R+ TS N APA W FGQTF G F Sbjct: 234 SDRRSSTSWNVAPATWQFGQTFSGKNF 260
>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)| (Ath-ExpAlpha-1.7) Length = 260 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/27 (62%), Positives = 18/27 (66%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SD RT TS N AP+ W FGQTF G F Sbjct: 232 SDRRTSTSWNIAPSNWQFGQTFVGKNF 258
>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)| (Ath-ExpAlpha-1.8) Length = 257 Score = 37.0 bits (84), Expect = 0.012 Identities = 17/27 (62%), Positives = 18/27 (66%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SD R+ TS N APA W FGQTF G F Sbjct: 229 SDRRSSTSWNIAPANWKFGQTFMGKNF 255
>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)| (Ath-ExpAlpha-1.6) Length = 257 Score = 35.8 bits (81), Expect = 0.027 Identities = 16/27 (59%), Positives = 17/27 (62%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274 SD RT TS N P+ W FGQTF G F Sbjct: 229 SDRRTSTSWNMVPSNWQFGQTFVGKNF 255
>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)| (AtEx25) (Ath-ExpAlpha-1.18) Length = 276 Score = 33.9 bits (76), Expect = 0.10 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEG 283 SDG T NN P W FGQTF+G Sbjct: 249 SDGVTKDFNNVMPNNWGFGQTFDG 272
>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)| (Ath-ExpAlpha-1.23) Length = 256 Score = 33.9 bits (76), Expect = 0.10 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 Query: 357 LSDGRTVTSNNAAPAGWSFGQTFEGGQF 274 L G+T+ S + AP W FG T++G QF Sbjct: 227 LKGGKTIASYDVAPPYWRFGMTYQGKQF 254
>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)| (Ath-ExpAlpha-1.17) Length = 269 Score = 33.9 bits (76), Expect = 0.10 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEG 283 SDG T NN P W FGQTF+G Sbjct: 242 SDGVTKDFNNVMPNNWGFGQTFDG 265
>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)| (AtEx21) (Ath-ExpAlpha-1.20) Length = 256 Score = 32.0 bits (71), Expect = 0.38 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEG 283 SDG T + PA W FGQTF+G Sbjct: 229 SDGITKDFTDVMPASWGFGQTFDG 252
>M3K7_DROME (Q9V3Q6) Mitogen-activated protein kinase kinase kinase 7 (EC| 2.7.11.25) (TGF-beta-activated kinase 1) (dTAK1) Length = 678 Score = 32.0 bits (71), Expect = 0.38 Identities = 13/53 (24%), Positives = 28/53 (52%) Frame = -2 Query: 357 LSDGRTVTSNNAAPAGWSFGQTFEGGQF*RDHPLDAWIALVWSLSKGRRKPLR 199 ++D T+ +NN A W + FEG ++ + +W ++W + R++P + Sbjct: 163 VADKSTMMTNNRGSAAWMAPEVFEGSKYTEKCDIFSWAIVLWEV-LSRKQPFK 214
>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)| (Expansin S2) (Ath-ExpAlpha-1.24) Length = 252 Score = 30.8 bits (68), Expect = 0.85 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = -2 Query: 357 LSDGRTVTSNNAAPAGWSFGQTF--EGGQF 274 L+D +T T N P+ W FGQTF G QF Sbjct: 222 LTDSKTQTFLNVVPSSWWFGQTFSSRGRQF 251
>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)| (AtEx22) (Ath-ExpAlpha-1.15) Length = 273 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEG 283 SDG T N P W FGQTF+G Sbjct: 246 SDGITKDFWNVMPKNWGFGQTFDG 269
>M3K7_HUMAN (O43318) Mitogen-activated protein kinase kinase kinase 7 (EC| 2.7.11.25) (Transforming growth factor-beta-activated kinase 1) (TGF-beta-activated kinase 1) Length = 606 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = -2 Query: 351 DGRTVTSNNAAPAGWSFGQTFEGGQF*RDHPLDAWIALVWSLSKGRRKP 205 D +T +NN A W + FEG + + +W ++W + RRKP Sbjct: 181 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKP 228
>M3K7_MOUSE (Q62073) Mitogen-activated protein kinase kinase kinase 7 (EC| 2.7.11.25) (Transforming growth factor-beta-activated kinase 1) (TGF-beta-activated kinase 1) Length = 579 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = -2 Query: 351 DGRTVTSNNAAPAGWSFGQTFEGGQF*RDHPLDAWIALVWSLSKGRRKP 205 D +T +NN A W + FEG + + +W ++W + RRKP Sbjct: 181 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKP 228
>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)| (AtEx26) (Ath-ExpAlpha-1.16) Length = 279 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 Query: 354 SDGRTVTSNNAAPAGWSFGQTFEG 283 +DG T N P W FGQTF+G Sbjct: 252 TDGITKDFWNVMPKNWGFGQTFDG 275
>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)| (AtEx17) (Ath-ExpAlpha-1.13) Length = 255 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -2 Query: 357 LSDGRTVTSNNAAPAGWSFGQTFE 286 LSDG + N P+ W FGQ+F+ Sbjct: 227 LSDGSIKAALNVVPSNWRFGQSFK 250
>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)| Length = 2567 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +3 Query: 189 KYKNEEVSFFPCSSSKPVQSMHPRGDLARTGLLRRSGQRT 308 K K E S PC S + + P+ + RTG L GQ T Sbjct: 189 KEKKGETSRTPCGSQASTEILAPKAEKTRTGGLGDPGQGT 228
>EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXPL3)| (Ath-ExpBeta-2.3) Length = 263 Score = 28.5 bits (62), Expect = 4.2 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -2 Query: 351 DGRTVTSNNAAPAGWSFGQTFEGG 280 DG+TV S PA W+ G+ ++ G Sbjct: 221 DGKTVWSKRVLPANWNSGRIYDAG 244
>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)| (Ath-ExpAlpha-1.25) Length = 257 Score = 28.1 bits (61), Expect = 5.5 Identities = 10/20 (50%), Positives = 16/20 (80%) Frame = -2 Query: 345 RTVTSNNAAPAGWSFGQTFE 286 +T+ + NAAPA WS G+T++ Sbjct: 232 QTIYAYNAAPASWSAGKTYQ 251 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,273,769 Number of Sequences: 219361 Number of extensions: 735164 Number of successful extensions: 1589 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1575 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1589 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)