ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet71g12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-... 52 3e-07
2EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-... 50 2e-06
3EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EX... 47 9e-06
4EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXP... 47 2e-05
5EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EX... 45 3e-05
6EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EX... 45 6e-05
7EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EX... 42 3e-04
8EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EX... 41 6e-04
9EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-... 40 0.001
10EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EX... 37 0.009
11EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-... 37 0.009
12EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EX... 37 0.012
13EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EX... 36 0.027
14EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXP... 34 0.10
15EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-... 34 0.10
16EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-... 34 0.10
17EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXP... 32 0.38
18M3K7_DROME (Q9V3Q6) Mitogen-activated protein kinase kinase kina... 32 0.38
19EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-... 31 0.85
20EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXP... 30 1.1
21M3K7_HUMAN (O43318) Mitogen-activated protein kinase kinase kina... 30 1.9
22M3K7_MOUSE (Q62073) Mitogen-activated protein kinase kinase kina... 30 1.9
23EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXP... 29 2.5
24EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXP... 29 3.2
25MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb) 28 4.2
26EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXP... 28 4.2
27EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-... 28 5.5

>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)|
           (Ath-ExpAlpha-1.1)
          Length = 249

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SDGRTV S NAAPAGWS+GQTF GGQF
Sbjct: 222 SDGRTVVSFNAAPAGWSYGQTFAGGQF 248



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>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)|
           (Ath-ExpAlpha-1.3)
          Length = 248

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 22/27 (81%), Positives = 22/27 (81%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SDGRTV SNN APA WSFGQTF G QF
Sbjct: 221 SDGRTVVSNNIAPASWSFGQTFTGRQF 247



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>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)|
           (Ath-ExpAlpha-1.11)
          Length = 253

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SDGRT+ SN+ AP+ W FGQT++GGQF
Sbjct: 227 SDGRTLVSNDVAPSNWQFGQTYQGGQF 253



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>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)|
           (AtEx14) (Ath-ExpAlpha-1.5)
          Length = 255

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 20/27 (74%), Positives = 21/27 (77%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SDGRTV SNNA P  WSFGQT+ G QF
Sbjct: 225 SDGRTVISNNATPRNWSFGQTYTGKQF 251



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>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)|
           (Ath-ExpAlpha-1.2)
          Length = 250

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQ 277
           SDG+T+ SNN A AGWSFGQTF G Q
Sbjct: 223 SDGQTIVSNNVANAGWSFGQTFTGAQ 248



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>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)|
           (Ath-ExpAlpha-1.12)
          Length = 255

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SDGRTV S +  P  W FGQTFEGGQF
Sbjct: 229 SDGRTVVSYDVVPHDWQFGQTFEGGQF 255



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>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)|
           (Ath-ExpAlpha-1.10)
          Length = 258

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SDGR+ TSNN AP+ W FGQT+ G  F
Sbjct: 230 SDGRSSTSNNIAPSNWQFGQTYSGKNF 256



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>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)|
           (Ath-ExpAlpha-1.4)
          Length = 255

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SD R+V S N AP  WSFGQT+ GGQF
Sbjct: 227 SDRRSVVSFNVAPPTWSFGQTYTGGQF 253



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>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)|
           (Ath-ExpAlpha-1.22)
          Length = 266

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SD  TVTS N +P  W++GQTFEG QF
Sbjct: 237 SDRSTVTSYNVSPKNWNYGQTFEGKQF 263



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>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)|
           (Ath-ExpAlpha-1.9)
          Length = 262

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 17/27 (62%), Positives = 18/27 (66%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SD R+ TS N APA W FGQTF G  F
Sbjct: 234 SDRRSSTSWNVAPATWQFGQTFSGKNF 260



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>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)|
           (Ath-ExpAlpha-1.7)
          Length = 260

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 17/27 (62%), Positives = 18/27 (66%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SD RT TS N AP+ W FGQTF G  F
Sbjct: 232 SDRRTSTSWNIAPSNWQFGQTFVGKNF 258



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>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)|
           (Ath-ExpAlpha-1.8)
          Length = 257

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 17/27 (62%), Positives = 18/27 (66%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SD R+ TS N APA W FGQTF G  F
Sbjct: 229 SDRRSSTSWNIAPANWKFGQTFMGKNF 255



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>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)|
           (Ath-ExpAlpha-1.6)
          Length = 257

 Score = 35.8 bits (81), Expect = 0.027
 Identities = 16/27 (59%), Positives = 17/27 (62%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           SD RT TS N  P+ W FGQTF G  F
Sbjct: 229 SDRRTSTSWNMVPSNWQFGQTFVGKNF 255



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>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)|
           (AtEx25) (Ath-ExpAlpha-1.18)
          Length = 276

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEG 283
           SDG T   NN  P  W FGQTF+G
Sbjct: 249 SDGVTKDFNNVMPNNWGFGQTFDG 272



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>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)|
           (Ath-ExpAlpha-1.23)
          Length = 256

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 357 LSDGRTVTSNNAAPAGWSFGQTFEGGQF 274
           L  G+T+ S + AP  W FG T++G QF
Sbjct: 227 LKGGKTIASYDVAPPYWRFGMTYQGKQF 254



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>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)|
           (Ath-ExpAlpha-1.17)
          Length = 269

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEG 283
           SDG T   NN  P  W FGQTF+G
Sbjct: 242 SDGVTKDFNNVMPNNWGFGQTFDG 265



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>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)|
           (AtEx21) (Ath-ExpAlpha-1.20)
          Length = 256

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEG 283
           SDG T    +  PA W FGQTF+G
Sbjct: 229 SDGITKDFTDVMPASWGFGQTFDG 252



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>M3K7_DROME (Q9V3Q6) Mitogen-activated protein kinase kinase kinase 7 (EC|
           2.7.11.25) (TGF-beta-activated kinase 1) (dTAK1)
          Length = 678

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = -2

Query: 357 LSDGRTVTSNNAAPAGWSFGQTFEGGQF*RDHPLDAWIALVWSLSKGRRKPLR 199
           ++D  T+ +NN   A W   + FEG ++     + +W  ++W +   R++P +
Sbjct: 163 VADKSTMMTNNRGSAAWMAPEVFEGSKYTEKCDIFSWAIVLWEV-LSRKQPFK 214



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>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)|
           (Expansin S2) (Ath-ExpAlpha-1.24)
          Length = 252

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 357 LSDGRTVTSNNAAPAGWSFGQTF--EGGQF 274
           L+D +T T  N  P+ W FGQTF   G QF
Sbjct: 222 LTDSKTQTFLNVVPSSWWFGQTFSSRGRQF 251



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>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)|
           (AtEx22) (Ath-ExpAlpha-1.15)
          Length = 273

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEG 283
           SDG T    N  P  W FGQTF+G
Sbjct: 246 SDGITKDFWNVMPKNWGFGQTFDG 269



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>M3K7_HUMAN (O43318) Mitogen-activated protein kinase kinase kinase 7 (EC|
           2.7.11.25) (Transforming growth factor-beta-activated
           kinase 1) (TGF-beta-activated kinase 1)
          Length = 606

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -2

Query: 351 DGRTVTSNNAAPAGWSFGQTFEGGQF*RDHPLDAWIALVWSLSKGRRKP 205
           D +T  +NN   A W   + FEG  +     + +W  ++W +   RRKP
Sbjct: 181 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKP 228



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>M3K7_MOUSE (Q62073) Mitogen-activated protein kinase kinase kinase 7 (EC|
           2.7.11.25) (Transforming growth factor-beta-activated
           kinase 1) (TGF-beta-activated kinase 1)
          Length = 579

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -2

Query: 351 DGRTVTSNNAAPAGWSFGQTFEGGQF*RDHPLDAWIALVWSLSKGRRKP 205
           D +T  +NN   A W   + FEG  +     + +W  ++W +   RRKP
Sbjct: 181 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKP 228



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>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)|
           (AtEx26) (Ath-ExpAlpha-1.16)
          Length = 279

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 354 SDGRTVTSNNAAPAGWSFGQTFEG 283
           +DG T    N  P  W FGQTF+G
Sbjct: 252 TDGITKDFWNVMPKNWGFGQTFDG 275



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>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)|
           (AtEx17) (Ath-ExpAlpha-1.13)
          Length = 255

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 357 LSDGRTVTSNNAAPAGWSFGQTFE 286
           LSDG    + N  P+ W FGQ+F+
Sbjct: 227 LSDGSIKAALNVVPSNWRFGQSFK 250



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>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)|
          Length = 2567

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 189 KYKNEEVSFFPCSSSKPVQSMHPRGDLARTGLLRRSGQRT 308
           K K  E S  PC S    + + P+ +  RTG L   GQ T
Sbjct: 189 KEKKGETSRTPCGSQASTEILAPKAEKTRTGGLGDPGQGT 228



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>EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXPL3)|
           (Ath-ExpBeta-2.3)
          Length = 263

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 351 DGRTVTSNNAAPAGWSFGQTFEGG 280
           DG+TV S    PA W+ G+ ++ G
Sbjct: 221 DGKTVWSKRVLPANWNSGRIYDAG 244



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>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)|
           (Ath-ExpAlpha-1.25)
          Length = 257

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 345 RTVTSNNAAPAGWSFGQTFE 286
           +T+ + NAAPA WS G+T++
Sbjct: 232 QTIYAYNAAPASWSAGKTYQ 251


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,273,769
Number of Sequences: 219361
Number of extensions: 735164
Number of successful extensions: 1589
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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