ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet71g12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA, complete cds Length = 1142 Score = 196 bits (99), Expect = 3e-47 Identities = 147/161 (91%), Gaps = 4/161 (2%) Strand = Plus / Minus Query: 198 aacgaagaggtttccttcttcccttgctcaagctccaaaccagtgcaatccatgcatcca 257 ||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||| Sbjct: 875 aacgaagaggtttccttct---cttgctcaagctccaaaccaatgcaatccatccgtcca 819 Query: 258 aggggtgatctcgctagaactggcctccttcgaaggtctggccaaaggaccagccggccg 317 || || |||||||||||||| ||||||||||||||||||| |||||||||||||| | Sbjct: 818 cggac-gacctcgctagaactgggctccttcgaaggtctggccgaaggaccagccggcgg 760 Query: 318 gggcggcgttgttgctggtgacggtgcggccgtcgctgagg 358 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 gggcggcgttgttgctggtgacggtgcggccgtcgctgagg 719 Score = 170 bits (86), Expect = 2e-39 Identities = 119/128 (92%), Gaps = 4/128 (3%) Strand = Plus / Minus Query: 5 aaaatgctcaactccacaagaa-taataacttatttatctctagtacaagtgtcctacta 63 ||||||||||||||||||| || ||||||||||||||| |||| ||| ||| |||||| Sbjct: 1009 aaaatgctcaactccacaataagtaataacttatttatgtctactac---tgtgctacta 953 Query: 64 gtatgagagaagggaaggcctaagcgggtgctgatcagcagcagcctcggaatagccaaa 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 952 gtatgagagaagggaaggcctaagcgggtgctgatcagcagcagcctcggaatagccgaa 893 Query: 124 ggcctctt 131 |||||||| Sbjct: 892 ggcctctt 885
>gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, complete cds Length = 1106 Score = 192 bits (97), Expect = 5e-46 Identities = 145/159 (91%), Gaps = 4/159 (2%) Strand = Plus / Minus Query: 198 aacgaagaggtttccttcttcccttgctcaagctccaaaccagtgcaatccatgcatcca 257 ||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||| Sbjct: 878 aacgaagaggtttccttct---cttgctcaagctccaaaccaatgcaatccatccgtcca 822 Query: 258 aggggtgatctcgctagaactggcctccttcgaaggtctggccaaaggaccagccggccg 317 || || |||||||||||||| ||||||||||||||||||| |||||||||||||| | Sbjct: 821 cggac-gacctcgctagaactgggctccttcgaaggtctggccgaaggaccagccggcgg 763 Query: 318 gggcggcgttgttgctggtgacggtgcggccgtcgctga 356 ||||||||||||||||||||||||||||||||||||||| Sbjct: 762 gggcggcgttgttgctggtgacggtgcggccgtcgctga 724 Score = 163 bits (82), Expect = 5e-37 Identities = 118/128 (92%), Gaps = 4/128 (3%) Strand = Plus / Minus Query: 5 aaaatgctcaactccacaagaa-taataacttatttatctctagtacaagtgtcctacta 63 ||||||| ||||||||||| || ||||||||||||||| |||| ||| ||| |||||| Sbjct: 1012 aaaatgcacaactccacaataagtaataacttatttatgtctactac---tgtgctacta 956 Query: 64 gtatgagagaagggaaggcctaagcgggtgctgatcagcagcagcctcggaatagccaaa 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 955 gtatgagagaagggaaggcctaagcgggtgctgatcagcagcagcctcggaatagccgaa 896 Query: 124 ggcctctt 131 |||||||| Sbjct: 895 ggcctctt 888
>emb|AJ276007.1|FPR276007 Festuca pratensis partial mRNA for expansin (exp2 gene) Length = 1248 Score = 117 bits (59), Expect = 3e-23 Identities = 80/87 (91%) Strand = Plus / Minus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 824 gctagaactggcctccttcgaaggtctggccgaactgccagccggccggggcggcgttgt 765 Query: 330 tgctggtgacggtgcggccgtcgctga 356 ||||| || ||||||||||||||||| Sbjct: 764 tgctgacgatggtgcggccgtcgctga 738 Score = 109 bits (55), Expect = 6e-21 Identities = 67/71 (94%) Strand = Plus / Minus Query: 61 ctagtatgagagaagggaaggcctaagcgggtgctgatcagcagcagcctcggaatagcc 120 ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1004 ctagtgtgagagaagggaaggcccaagcgggtgctgatcagcagcaacctcggaatagcc 945 Query: 121 aaaggcctctt 131 |||||||||| Sbjct: 944 gaaggcctctt 934 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 215 cttcccttgctcaagctccaaaccagtgcaatccatg 251 |||| ||||||||||||||||| || |||||| |||| Sbjct: 911 cttctcttgctcaagctccaaatcaatgcaattcatg 875
>ref|NM_190380.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 756 Score = 95.6 bits (48), Expect = 9e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 273 agaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgttgc 332 |||||||||| || |||||||||||||| || |||||||||||| || ||||||||| Sbjct: 754 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 695 Query: 333 tggtgacggtgcggccgtcgctga 356 |||||||||||||||||||||||| Sbjct: 694 tggtgacggtgcggccgtcgctga 671
>gb|AF394544.1| Oryza sativa alpha-expansin OsEXPA2 (EXPA2) gene, complete cds Length = 5000 Score = 95.6 bits (48), Expect = 9e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 273 agaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgttgc 332 |||||||||| || |||||||||||||| || |||||||||||| || ||||||||| Sbjct: 2801 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 2742 Query: 333 tggtgacggtgcggccgtcgctga 356 |||||||||||||||||||||||| Sbjct: 2741 tggtgacggtgcggccgtcgctga 2718 Score = 40.1 bits (20), Expect = 4.8 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 78 aaggcctaagcgggtgctga-tcagcagcagcctcggaatagccaaag 124 |||||||||||||||||| | | | ||||||||| |||||||||||| Sbjct: 2967 aaggcctaagcgggtgctaattaataagcagcctcagaatagccaaag 2920
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 95.6 bits (48), Expect = 9e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 273 agaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgttgc 332 |||||||||| || |||||||||||||| || |||||||||||| || ||||||||| Sbjct: 35140092 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 35140033 Query: 333 tggtgacggtgcggccgtcgctga 356 |||||||||||||||||||||||| Sbjct: 35140032 tggtgacggtgcggccgtcgctga 35140009 Score = 83.8 bits (42), Expect = 4e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||||| || |||||||||||| ||||||||||||| |||||| |||||| Sbjct: 9525901 gctagaactggccgccggagaaggtctggccgaaggaccagccggagggggcgacgttgt 9525842 Query: 330 tgctggtgacggtgcggccgtcgctg 355 | |||||||||||||||||||||| Sbjct: 9525841 cggaggtgacggtgcggccgtcgctg 9525816 Score = 40.1 bits (20), Expect = 4.8 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 78 aaggcctaagcgggtgctga-tcagcagcagcctcggaatagccaaag 124 |||||||||||||||||| | | | ||||||||| |||||||||||| Sbjct: 35140258 aaggcctaagcgggtgctaattaataagcagcctcagaatagccaaag 35140211 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 agtactccttctgtcctaaaataa 159 |||||||| ||||||||||||||| Sbjct: 29220097 agtactccatctgtcctaaaataa 29220120 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 ttgtagtactccttctgtcctaaaataa 159 ||||||||||||||| |||| ||||||| Sbjct: 6600956 ttgtagtactccttccgtcccaaaataa 6600983 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 agtactccttctgtcctaaaataa 159 |||||||||||||||| ||||||| Sbjct: 6009411 agtactccttctgtcccaaaataa 6009434
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 95.6 bits (48), Expect = 9e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 273 agaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgttgc 332 |||||||||| || |||||||||||||| || |||||||||||| || ||||||||| Sbjct: 19176 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 19117 Query: 333 tggtgacggtgcggccgtcgctga 356 |||||||||||||||||||||||| Sbjct: 19116 tggtgacggtgcggccgtcgctga 19093 Score = 40.1 bits (20), Expect = 4.8 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 78 aaggcctaagcgggtgctga-tcagcagcagcctcggaatagccaaag 124 |||||||||||||||||| | | | ||||||||| |||||||||||| Sbjct: 19342 aaggcctaagcgggtgctaattaataagcagcctcagaatagccaaag 19295
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 95.6 bits (48), Expect = 9e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 273 agaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgttgc 332 |||||||||| || |||||||||||||| || |||||||||||| || ||||||||| Sbjct: 147242 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 147183 Query: 333 tggtgacggtgcggccgtcgctga 356 |||||||||||||||||||||||| Sbjct: 147182 tggtgacggtgcggccgtcgctga 147159 Score = 40.1 bits (20), Expect = 4.8 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 78 aaggcctaagcgggtgctga-tcagcagcagcctcggaatagccaaag 124 |||||||||||||||||| | | | ||||||||| |||||||||||| Sbjct: 147408 aaggcctaagcgggtgctaattaataagcagcctcagaatagccaaag 147361
>dbj|AK070463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M24, full insert sequence Length = 1341 Score = 95.6 bits (48), Expect = 9e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 273 agaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgttgc 332 |||||||||| || |||||||||||||| || |||||||||||| || ||||||||| Sbjct: 851 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 792 Query: 333 tggtgacggtgcggccgtcgctga 356 |||||||||||||||||||||||| Sbjct: 791 tggtgacggtgcggccgtcgctga 768 Score = 40.1 bits (20), Expect = 4.8 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 78 aaggcctaagcgggtgctga-tcagcagcagcctcggaatagccaaag 124 |||||||||||||||||| | | | ||||||||| |||||||||||| Sbjct: 1017 aaggcctaagcgggtgctaattaataagcagcctcagaatagccaaag 970
>gb|AF394545.1| Oryza sativa alpha-expansin OsEXPA4 (EXPA4) gene, complete cds Length = 5851 Score = 91.7 bits (46), Expect = 1e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||||| || |||||||||||||| || |||||||| ||||| |||||| Sbjct: 5167 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 5108 Query: 330 tgctggtgacggtgcggccgtcgctg 355 |||||||||||||||||||||||||| Sbjct: 5107 tgctggtgacggtgcggccgtcgctg 5082
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 91.7 bits (46), Expect = 1e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||||| || |||||||||||||| || |||||||| ||||| |||||| Sbjct: 37898 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 37957 Query: 330 tgctggtgacggtgcggccgtcgctg 355 |||||||||||||||||||||||||| Sbjct: 37958 tgctggtgacggtgcggccgtcgctg 37983
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 91.7 bits (46), Expect = 1e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||||| || |||||||||||||| || |||||||| ||||| |||||| Sbjct: 23352362 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 23352421 Query: 330 tgctggtgacggtgcggccgtcgctg 355 |||||||||||||||||||||||||| Sbjct: 23352422 tgctggtgacggtgcggccgtcgctg 23352447
>dbj|AK105988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G10, full insert sequence Length = 2440 Score = 91.7 bits (46), Expect = 1e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||||| || |||||||||||||| || |||||||| ||||| |||||| Sbjct: 804 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 745 Query: 330 tgctggtgacggtgcggccgtcgctg 355 |||||||||||||||||||||||||| Sbjct: 744 tgctggtgacggtgcggccgtcgctg 719
>dbj|AK100179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029P10, full insert sequence Length = 1311 Score = 91.7 bits (46), Expect = 1e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||||| || |||||||||||||| || |||||||| ||||| |||||| Sbjct: 805 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 746 Query: 330 tgctggtgacggtgcggccgtcgctg 355 |||||||||||||||||||||||||| Sbjct: 745 tgctggtgacggtgcggccgtcgctg 720
>gb|U85246.1|OSU85246 Oryza sativa expansin (Os-EXP4) mRNA, complete cds Length = 1219 Score = 91.7 bits (46), Expect = 1e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||||| || |||||||||||||| || |||||||| ||||| |||||| Sbjct: 795 gctagaactggccgccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 736 Query: 330 tgctggtgacggtgcggccgtcgctg 355 |||||||||||||||||||||||||| Sbjct: 735 tgctggtgacggtgcggccgtcgctg 710
>ref|XM_475418.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 741 Score = 89.7 bits (45), Expect = 6e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 271 ctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgtt 330 |||||||||||| || |||||||||||||| || |||||||| ||||| ||||||| Sbjct: 741 ctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgtt 682 Query: 331 gctggtgacggtgcggccgtcgctg 355 ||||||||||||||||||||||||| Sbjct: 681 gctggtgacggtgcggccgtcgctg 657
>gb|U30477.1|OSU30477 Oryza sativa (japonica cultivar-group) expansin Os-EXPA2 (Os-EXPA2) mRNA, complete cds Length = 1323 Score = 89.7 bits (45), Expect = 6e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 273 agaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgttgc 332 |||||||||| || |||||||||||| | || |||||||||||| || ||||||||| Sbjct: 836 agaactggccgccctcgaaggtctggncgaactgccagccggccggcacgacgttgttgc 777 Query: 333 tggtgacggtgcggccgtcgctga 356 |||||||||||||||||||||||| Sbjct: 776 tggtgacggtgcggccgtcgctga 753 Score = 40.1 bits (20), Expect = 4.8 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 78 aaggcctaagcgggtgctga-tcagcagcagcctcggaatagccaaag 124 |||||||||||||||||| | | | ||||||||| |||||||||||| Sbjct: 1002 aaggcctaagcgggtgctaattaataagcagcctcagaatagccaaag 955
>gb|AY910581.1| Triticum aestivum expansin EXPA11 mRNA, complete cds Length = 1246 Score = 89.7 bits (45), Expect = 6e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 271 ctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgtt 330 |||||||||| | || |||||||||||||| ||| ||||||||| || |||||| ||| Sbjct: 806 ctagaactgggcgccctcgaaggtctggccgaagtgccagccggcgggcgcggcggcgtt 747 Query: 331 gctggtgacggtgcggccgtcgctg 355 ||||||||||||||||||||||||| Sbjct: 746 gctggtgacggtgcggccgtcgctg 722
>gb|AY485121.3| Triticum aestivum expansin EXPA1 mRNA, complete cds Length = 1265 Score = 89.7 bits (45), Expect = 6e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 271 ctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgtt 330 |||||||||| | || |||||||||||||| ||| ||||||||| || |||||| ||| Sbjct: 806 ctagaactgggcgccctcgaaggtctggccgaagtgccagccggcgggcgcggcggcgtt 747 Query: 331 gctggtgacggtgcggccgtcgctg 355 ||||||||||||||||||||||||| Sbjct: 746 gctggtgacggtgcggccgtcgctg 722
>gb|DQ062981.1| Oryza sativa (japonica cultivar-group) alpha-expansin 11 (EXPA11) mRNA, partial cds Length = 798 Score = 83.8 bits (42), Expect = 4e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||||| || |||||||||||| ||||||||||||| |||||| |||||| Sbjct: 739 gctagaactggccgccggagaaggtctggccgaaggaccagccggagggggcgacgttgt 680 Query: 330 tgctggtgacggtgcggccgtcgctg 355 | |||||||||||||||||||||| Sbjct: 679 cggaggtgacggtgcggccgtcgctg 654
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 83.8 bits (42), Expect = 4e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||||| || |||||||||||| ||||||||||||| |||||| |||||| Sbjct: 59330 gctagaactggccgccggagaaggtctggccgaaggaccagccggagggggcgacgttgt 59271 Query: 330 tgctggtgacggtgcggccgtcgctg 355 | |||||||||||||||||||||| Sbjct: 59270 cggaggtgacggtgcggccgtcgctg 59245
>ref|XM_493787.1| Oryza sativa (japonica cultivar-group), Ozsa8506 predicted mRNA Length = 747 Score = 81.8 bits (41), Expect = 1e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 271 ctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgtt 330 |||||||||||| || |||||||||||| ||||||||||||| |||||| |||||| Sbjct: 747 ctagaactggccgccggagaaggtctggccgaaggaccagccggagggggcgacgttgtc 688 Query: 331 gctggtgacggtgcggccgtcgctg 355 | |||||||||||||||||||||| Sbjct: 687 ggaggtgacggtgcggccgtcgctg 663
>gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, complete cds Length = 1201 Score = 81.8 bits (41), Expect = 1e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 287 tcgaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcgg 346 |||||||||||||| ||| ||||||||| || |||||| ||||||||||||||||||| Sbjct: 791 tcgaaggtctggccgaagtgccagccggcgggcgcggcggcgttgctggtgacggtgcgg 732 Query: 347 ccgtcgctg 355 ||||||||| Sbjct: 731 ccgtcgctg 723
>gb|AY910580.1| Triticum aestivum expansin EXPA10 mRNA, complete cds Length = 1226 Score = 81.8 bits (41), Expect = 1e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 287 tcgaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcgg 346 |||||||||||||| ||| ||||||||| || |||||| ||||||||||||||||||| Sbjct: 791 tcgaaggtctggccgaagtgccagccggcgggcgcggcggcgttgctggtgacggtgcgg 732 Query: 347 ccgtcgctg 355 ||||||||| Sbjct: 731 ccgtcgctg 723
>gb|AY133251.1|AY133250S2 Hordeum vulgare subsp. vulgare starch synthase II gene, exon 9 and complete cds Length = 3856 Score = 77.8 bits (39), Expect = 2e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 137 gtactccttctgtcctaaaataactgtctcaattttgtactagctctagtacaaa 191 ||||||| || |||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 1002 gtactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaa 948
>gb|AF332173.1| Zea mays alpha-expansin 5 mRNA, complete cds Length = 1029 Score = 77.8 bits (39), Expect = 2e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 273 agaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgttgc 332 |||||||||| || |||||||||||||| || |||||| || ||| ||||| ||||| Sbjct: 687 agaactggccgccctcgaaggtctggccgaactgccagccagcggggacggcgccgttgc 628 Query: 333 tggtgacggtgcggccgtcgctg 355 ||||||||||||||||||||||| Sbjct: 627 tggtgacggtgcggccgtcgctg 605
>gb|AF332169.1| Zea mays alpha-expansin (expA1) mRNA, complete cds Length = 1090 Score = 75.8 bits (38), Expect = 9e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||| | || |||||||||||||| || |||||| ||||| ||| || || Sbjct: 824 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 765 Query: 330 tgctggtgacggtgcggccgtcgctg 355 |||||||||||||||||||||||||| Sbjct: 764 tgctggtgacggtgcggccgtcgctg 739 Score = 48.1 bits (24), Expect = 0.020 Identities = 42/48 (87%) Strand = Plus / Minus Query: 69 agagaagggaaggcctaagcgggtgctgatcagcagcagcctcggaat 116 |||||||| || ||||||||||||||| || | |||||||||||||| Sbjct: 956 agagaaggaaatgcctaagcgggtgctaataataagcagcctcggaat 909
>gb|AY104146.1| Zea mays PCO064861 mRNA sequence Length = 1106 Score = 75.8 bits (38), Expect = 9e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 270 gctagaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgt 329 ||||||||||| | || |||||||||||||| || |||||| ||||| ||| || || Sbjct: 841 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 782 Query: 330 tgctggtgacggtgcggccgtcgctg 355 |||||||||||||||||||||||||| Sbjct: 781 tgctggtgacggtgcggccgtcgctg 756 Score = 48.1 bits (24), Expect = 0.020 Identities = 42/48 (87%) Strand = Plus / Minus Query: 69 agagaagggaaggcctaagcgggtgctgatcagcagcagcctcggaat 116 |||||||| || ||||||||||||||| || | |||||||||||||| Sbjct: 973 agagaaggaaatgcctaagcgggtgctaataataagcagcctcggaat 926
>gb|AY109967.1| Zea mays CL5898_1 mRNA sequence Length = 570 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 273 agaactggcctccttcgaaggtctggccaaaggaccagccggccggggcggcgttgttgc 332 |||||||||| || |||||||||||||| || |||| || | ||| ||||| ||||| Sbjct: 203 agaactggccgccctcgaaggtctggccgaactgccagacgacggggacggcgccgttgc 144 Query: 333 tggtgacggtgcggccgtcgctg 355 ||||||||||||||||||||||| Sbjct: 143 tggtgacggtgcggccgtcgctg 121
>gb|AF509744.1| Hordeum vulgare subsp. vulgare Morex receptor-like kinase gene, complete cds Length = 4643 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 135 tagtactccttctgtcctaaaataactgtctcaattttgtactagctctagtacaaat 192 ||||||||| || |||| ||||||| |||||||| |||||||||||||||||| |||| Sbjct: 2033 tagtactccctccgtcccaaaataattgtctcaactttgtactagctctagtataaat 2090
>emb|AJ234485.1|HVU234485 Hordeum vulgare genomic DNA fragment; clone MWG0526.rev Length = 379 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 138 tactccttctgtcctaaaataactgtctcaattttgtactagctctagtacaaa 191 |||||| |||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 214 tactccctctgtctcaaaataactgtctcaacattgtactagctctagtacaaa 161
>gb|AF509746.1| Hordeum vulgare subsp. spontaneum OSU6 receptor-like kinase gene, complete cds Length = 2513 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 135 tagtactccttctgtcctaaaataactgtctcaattttgtactagctctagta 187 ||||||||| || |||| ||||||| |||||||| |||||||||||||||||| Sbjct: 1307 tagtactccctccgtcccaaaataattgtctcaactttgtactagctctagta 1359
>gb|AF509745.1| Hordeum vulgare subsp. vulgare Steptoe receptor-like kinase gene, complete cds Length = 2550 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 135 tagtactccttctgtcctaaaataactgtctcaattttgtactagctctagta 187 ||||||||| || |||| ||||||| |||||||| |||||||||||||||||| Sbjct: 1332 tagtactccctccgtcccaaaataattgtctcaactttgtactagctctagta 1384
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 136 agtactccttctgtcctaaaataactgtctcaattttgtactagctctagtacaaa 191 ||||||||||| |||| ||||||| |||||||||||| |||| |||||||||||| Sbjct: 3665 agtactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaa 3720
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 153 aaaataactgtctcaattttgtactagctctagtacaaa 191 ||||||| |||||||| |||||||||||||||||||||| Sbjct: 206037 aaaataaatgtctcaactttgtactagctctagtacaaa 206075
>emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box protein (m1 gene) Length = 1086 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 153 aaaataactgtctcaattttgtactagctctagtacaaa 191 |||||||||||||||| |||||| ||||||||||||||| Sbjct: 929 aaaataactgtctcaactttgtattagctctagtacaaa 967
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 138 tactccttctgtcctaaaataactgtctcaattttgtactagctctagtacaaa 191 |||||| || |||| |||||||||||||||| ||||||||| || ||||||||| Sbjct: 78751 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaa 78698
>gb|DQ201146.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome C (PhyC) gene, complete cds Length = 4914 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 154 aaataactgtctcaattttgtactagctctagtacaaa 191 |||||| |||||||||||||||||||||||| |||||| Sbjct: 3964 aaataagtgtctcaattttgtactagctctattacaaa 4001
>gb|DQ238106.1| Hordeum vulgare subsp. vulgare cv. Morex phytochrome C (PhyC) gene, complete cds Length = 4938 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 154 aaataactgtctcaattttgtactagctctagtacaaa 191 |||||| |||||||||||||||||||||||| |||||| Sbjct: 3964 aaataagtgtctcaattttgtactagctctattacaaa 4001
>gb|DQ201145.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC) gene, complete cds Length = 4914 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 154 aaataactgtctcaattttgtactagctctagtacaaa 191 |||||| |||||||||||||||||||||||| |||||| Sbjct: 3964 aaataagtgtctcaattttgtactagctctattacaaa 4001
>dbj|AB024006.1| Hordeum vulgare naat-B and naat-A genes for nicotianamine aminotransferase, complete cds Length = 10966 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 138 tactccttctgtcctaaaataactgtctcaattttgtactagctctagta 187 |||||| ||||||| ||||||||||| |||| |||||||||| ||||||| Sbjct: 8999 tactccctctgtcccaaaataactgtttcaactttgtactagatctagta 8950
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 148 gtcctaaaataactgtctcaattttgtactagctctagtacaaat 192 |||| ||||||| |||||| | ||||||||||||||||||||||| Sbjct: 31514 gtcccaaaataagtgtctccactttgtactagctctagtacaaat 31470
>gb|DQ100330.1| Eucalyptus globulus putative alpha-expansin (EXPA3) mRNA, partial cds Length = 887 Score = 56.0 bits (28), Expect = 8e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 288 cgaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggc 347 |||||||||| || |||||||| ||||| |||||| |||||||| | |||||||||| Sbjct: 380 cgaaggtctgcccgaaggaccacccggcgggggcgacgttgttggagaccacggtgcggc 321 Query: 348 cgtcgctg 355 |||||||| Sbjct: 320 cgtcgctg 313
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 153 aaaataactgtctcaattttgtactagctctagtacaaa 191 ||||||| |||||||| |||||||||| ||||||||||| Sbjct: 50412 aaaataagtgtctcaactttgtactagttctagtacaaa 50450
>gb|AF319473.1| Cucumis sativus alpha-expansin 7 precursor mRNA, partial cds Length = 696 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 293 gtctggccaaaggaccagccggccggggcggcgttgttg 331 ||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 518 gtctgtccaaaggaccagccggctgggacggcgttgttg 480
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 153 aaaataactgtctcaattttgtactagctctagtacaaa 191 ||||||| |||||||| ||||||||||||||| |||||| Sbjct: 7216 aaaataagtgtctcaactttgtactagctctactacaaa 7254
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Minus Query: 148 gtcctaaaataactgtctcaattttgtactagctctagtacaaa 191 |||| |||||||||||||||| |||||| ||| | ||||||||| Sbjct: 62350 gtcccaaaataactgtctcaactttgtattagatttagtacaaa 62307
>gb|AF350938.1|AF350938 Prunus cerasus expansin (EXP3) mRNA, complete cds Length = 1172 Score = 46.1 bits (23), Expect = 0.077 Identities = 53/63 (84%) Strand = Plus / Minus Query: 293 gtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggccgtcg 352 ||||||||||| ||||||| ||| || || |||||||| | |||||||||||||||| Sbjct: 790 gtctggccaaatgaccagcaggcaggagcaacgttgttggcgacgacggtgcggccgtcg 731 Query: 353 ctg 355 ||| Sbjct: 730 ctg 728
>dbj|AP001822.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2336M4, complete sequence Length = 134278 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 92 tgctgatcagcagcagcctcgga 114 ||||||||||||||||||||||| Sbjct: 84419 tgctgatcagcagcagcctcgga 84397
>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds Length = 4954 Score = 44.1 bits (22), Expect = 0.30 Identities = 46/54 (85%) Strand = Plus / Minus Query: 138 tactccttctgtcctaaaataactgtctcaattttgtactagctctagtacaaa 191 |||||| || ||| |||||||| | ||| || ||||||||| |||||||||||| Sbjct: 3885 tactccctccgtcttaaaataattatcttaactttgtactatctctagtacaaa 3832
>gb|DQ175992.1| Hordeum vulgare subsp. vulgare clone 65-22A-RB flanking T-DNA insertion sequence Length = 267 Score = 44.1 bits (22), Expect = 0.30 Identities = 43/50 (86%) Strand = Plus / Minus Query: 138 tactccttctgtcctaaaataactgtctcaattttgtactagctctagta 187 |||||| || |||| ||||||| ||||| || ||||| |||||||||||| Sbjct: 150 tactccctccgtcccaaaataattgtcttaactttgttctagctctagta 101
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 ggcgttgttgctggtgacggtg 343 |||||||||||||||||||||| Sbjct: 3477565 ggcgttgttgctggtgacggtg 3477544
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 322 ggcgttgttgctggtgacggtg 343 |||||||||||||||||||||| Sbjct: 4160873 ggcgttgttgctggtgacggtg 4160894
>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes Length = 372438 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 ggcgttgttgctggtgacggtg 343 |||||||||||||||||||||| Sbjct: 260291 ggcgttgttgctggtgacggtg 260270
>dbj|AB104442.1| Vitis labrusca x Vitis vinifera Vexp-1 mRNA for expansin, complete cds Length = 1245 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccag 310 |||||||||||||||||||||| Sbjct: 775 gaaggtctggccaaaggaccag 754
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 331 gctggtgacggtgcggccgtcg 352 |||||||||||||||||||||| Sbjct: 3359142 gctggtgacggtgcggccgtcg 3359163
>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b) pseudogene, partial sequence Length = 4018 Score = 44.1 bits (22), Expect = 0.30 Identities = 46/54 (85%) Strand = Plus / Minus Query: 138 tactccttctgtcctaaaataactgtctcaattttgtactagctctagtacaaa 191 |||||| || ||| |||||||| | ||| || ||||||||| |||||||||||| Sbjct: 3933 tactccctccgtcttaaaataattatcttaactttgtactatctctagtacaaa 3880
>ref|XM_467754.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1289 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggcc 348 |||||||||||| ||||||||||| ||| ||||||||||| | ||||| |||||| Sbjct: 929 gaaggtctggccgaaggaccagccacgggggacggcgttgttggagacgacggagcggcc 870 Query: 349 gtcgc 353 ||||| Sbjct: 869 gtcgc 865
>ref|XM_506968.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1734_E02.30 mRNA Length = 1417 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggcc 348 |||||||||||| ||||||||||| ||| ||||||||||| | ||||| |||||| Sbjct: 935 gaaggtctggccgaaggaccagccacgggggacggcgttgttggagacgacggagcggcc 876 Query: 349 gtcgc 353 ||||| Sbjct: 875 gtcgc 871
>gb|AF247162.1| Oryza sativa alpha-expansin OsEXPA5 mRNA, complete cds Length = 1412 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggcc 348 |||||||||||| ||||||||||| ||| ||||||||||| | ||||| |||||| Sbjct: 906 gaaggtctggccgaaggaccagccacgggggacggcgttgttggagacgacggagcggcc 847 Query: 349 gtcgc 353 ||||| Sbjct: 846 gtcgc 842
>gb|AF394546.1| Oryza sativa alpha-expansin OsEXPA5 (EXPA5) gene, complete cds Length = 6774 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggcc 348 |||||||||||| ||||||||||| ||| ||||||||||| | ||||| |||||| Sbjct: 5297 gaaggtctggccgaaggaccagccacgggggacggcgttgttggagacgacggagcggcc 5238 Query: 349 gtcgc 353 ||||| Sbjct: 5237 gtcgc 5233
>gb|AY500145.1| Craterostigma plantagineum expansin A2 (EXPA2) mRNA, partial cds Length = 657 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 275 aactggcctccttcgaaggtctggccaaa 303 |||||||| ||||| |||||||||||||| Sbjct: 656 aactggccgccttcaaaggtctggccaaa 628
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 130 ttttgtagtactccttctgtcctaaaata 158 |||||||||||||| || ||||||||||| Sbjct: 3518836 ttttgtagtactccctccgtcctaaaata 3518864
>gb|AE011628.1| Xanthomonas axonopodis pv. citri str. 306, section 6 of 469 of the complete genome Length = 11011 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 319 ggcggcgttgttgctggtgacggtg 343 ||||||||||||||||||| ||||| Sbjct: 8759 ggcggcgttgttgctggtgccggtg 8735
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 ccttgctcaagctccaaacca 239 ||||||||||||||||||||| Sbjct: 1298437 ccttgctcaagctccaaacca 1298457
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 137 gtactccttctgtcctaaaataact 161 ||||||||||||||| ||||||||| Sbjct: 27340537 gtactccttctgtcccaaaataact 27340513
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 130 ttttgtagtactccttctgtcctaaaata 158 |||||||||||||| || ||||||||||| Sbjct: 3518947 ttttgtagtactccctccgtcctaaaata 3518975
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggcc 348 |||||||||||| ||||||||||| ||| ||||||||||| | ||||| |||||| Sbjct: 31240183 gaaggtctggccgaaggaccagccacgggggacggcgttgttggagacgacggagcggcc 31240124 Query: 349 gtcgc 353 ||||| Sbjct: 31240123 gtcgc 31240119
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 130 ttttgtagtactccttctgtcctaaaata 158 |||||||||||||| || ||||||||||| Sbjct: 36489 ttttgtagtactccctccgtcctaaaata 36517
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1734_E02 Length = 168566 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggcc 348 |||||||||||| ||||||||||| ||| ||||||||||| | ||||| |||||| Sbjct: 120026 gaaggtctggccgaaggaccagccacgggggacggcgttgttggagacgacggagcggcc 119967 Query: 349 gtcgc 353 ||||| Sbjct: 119966 gtcgc 119962
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1118_G04 Length = 134464 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggcc 348 |||||||||||| ||||||||||| ||| ||||||||||| | ||||| |||||| Sbjct: 10051 gaaggtctggccgaaggaccagccacgggggacggcgttgttggagacgacggagcggcc 9992 Query: 349 gtcgc 353 ||||| Sbjct: 9991 gtcgc 9987
>gb|AY589583.1| Triticum aestivum alpha-expansin EXPA1 mRNA, complete cds Length = 965 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 288 cgaaggtctggccaaaggaccagccggccggggcggcgttg 328 ||||||||||||| ||| ||||||||| || ||||||||| Sbjct: 782 cgaaggtctggccgaagccccagccggcgggagcggcgttg 742
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 137 gtactccttctgtcctaaaataact 161 ||||||||||||||| ||||||||| Sbjct: 42064 gtactccttctgtcccaaaataact 42040
>dbj|AK107334.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-F08, full insert sequence Length = 1290 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggcc 348 |||||||||||| ||||||||||| ||| ||||||||||| | ||||| |||||| Sbjct: 929 gaaggtctggccgaaggaccagccacgggggacggcgttgttggagacgacggagcggcc 870 Query: 349 gtcgc 353 ||||| Sbjct: 869 gtcgc 865
>dbj|AK073572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E11, full insert sequence Length = 1416 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccagccggccggggcggcgttgttgctggtgacggtgcggcc 348 |||||||||||| ||||||||||| ||| ||||||||||| | ||||| |||||| Sbjct: 934 gaaggtctggccgaaggaccagccacgggggacggcgttgttggagacgacggagcggcc 875 Query: 349 gtcgc 353 ||||| Sbjct: 874 gtcgc 870
>ref|NM_102440.3| Arabidopsis thaliana ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A10) AT1G26770 (ATEXPA10) mRNA, complete cds Length = 1366 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 293 gtctggccaaaggaccagccggccggggcggcgttg 328 ||||||||| | ||||||||||| || ||||||||| Sbjct: 820 gtctggccataagaccagccggcaggagcggcgttg 785
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed globulin (Glo-2) gene, complete cds; HMW-glutenin (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds Length = 102842 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 ctggccaaaggaccagccggccgg 318 ||||||||||| |||||||||||| Sbjct: 88143 ctggccaaaggcccagccggccgg 88166
>gb|BT013780.1| Lycopersicon esculentum clone 132670R, mRNA sequence Length = 3414 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 ctactagtatgagagaagggaagg 81 |||| ||||||||||||||||||| Sbjct: 266 ctacgagtatgagagaagggaagg 289
>gb|AF229437.1| Arabidopsis thaliana expansin 10 (EXPA10) mRNA, complete cds Length = 1189 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 293 gtctggccaaaggaccagccggccggggcggcgttg 328 ||||||||| | ||||||||||| || ||||||||| Sbjct: 768 gtctggccataagaccagccggcaggagcggcgttg 733
>gb|AF229431.1| Arabidopsis thaliana expansin 10 (EXPA10) gene, complete cds Length = 3705 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 293 gtctggccaaaggaccagccggccggggcggcgttg 328 ||||||||| | ||||||||||| || ||||||||| Sbjct: 2608 gtctggccataagaccagccggcaggagcggcgttg 2573
>gb|AC110250.16| Mus musculus chromosome 1, clone RP23-260K6, complete sequence Length = 219359 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ctccttctgtcctaaaataa 159 |||||||||||||||||||| Sbjct: 8280 ctccttctgtcctaaaataa 8299
>gb|AC120138.9| Mus musculus chromosome 1, clone RP23-283D3, complete sequence Length = 216381 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ctccttctgtcctaaaataa 159 |||||||||||||||||||| Sbjct: 51650 ctccttctgtcctaaaataa 51631
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 cgttgttgctggtgacggtg 343 |||||||||||||||||||| Sbjct: 4521561 cgttgttgctggtgacggtg 4521542
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 325 gttgttgctggtgacggtgcggccgtcg 352 ||||||||||||| ||||||||||||| Sbjct: 252907 gttgttgctggtggaggtgcggccgtcg 252880
>emb|AL590153.9| Zebrafish DNA sequence from clone RP71-71M17 in linkage group 8 Contains a novel gene and part of a novel gene for a protein similar to mouse silencing mediator of retinoic acid and thyroid hormone receptor (SMRT), complete sequence Length = 133947 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 tctcaattttgtactagctctagt 186 |||| ||||||||||||||||||| Sbjct: 120582 tctctattttgtactagctctagt 120559
>gb|DQ397833.1| Cenarchaeum symbiosum clone C02E10, complete sequence Length = 42750 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 caaaggaccagccggccggggcgg 323 ||||||||| |||||||||||||| Sbjct: 24098 caaaggacctgccggccggggcgg 24075
>gb|DQ397831.1| Cenarchaeum symbiosum clone C02C04, complete sequence Length = 42751 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 caaaggaccagccggccggggcgg 323 ||||||||| |||||||||||||| Sbjct: 18653 caaaggacctgccggccggggcgg 18676
>gb|AF397489.1| Ips paraconfusus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 389 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aaaataactgtctcaatttt 172 |||||||||||||||||||| Sbjct: 304 aaaataactgtctcaatttt 285
>gb|AF397488.1| Ips montanus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 388 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aaaataactgtctcaatttt 172 |||||||||||||||||||| Sbjct: 303 aaaataactgtctcaatttt 284
>gb|AF397482.1| Ips hoppingi 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 388 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aaaataactgtctcaatttt 172 |||||||||||||||||||| Sbjct: 303 aaaataactgtctcaatttt 284
>gb|AF397478.1| Ips cribricollis 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 378 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aaaataactgtctcaatttt 172 |||||||||||||||||||| Sbjct: 306 aaaataactgtctcaatttt 287
>gb|AF397477.1| Ips confusus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 389 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aaaataactgtctcaatttt 172 |||||||||||||||||||| Sbjct: 304 aaaataactgtctcaatttt 285
>gb|AY060512.1| Arabidopsis thaliana At1g26770/T24P13_14 mRNA, complete cds Length = 750 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 293 gtctggccaaaggaccagccggccggggcggcgttg 328 ||||||||| | ||||||||||| || ||||||||| Sbjct: 725 gtctggccataagaccagccggcaggagcggcgttg 690
>gb|AY052247.1| Arabidopsis thaliana At1g26770/T24P13_14 mRNA, complete cds Length = 1238 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 293 gtctggccaaaggaccagccggccggggcggcgttg 328 ||||||||| | ||||||||||| || ||||||||| Sbjct: 814 gtctggccataagaccagccggcaggagcggcgttg 779
>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 tagtactccttctgtcctaaaata 158 ||||||||||||||||| |||||| Sbjct: 82035 tagtactccttctgtcccaaaata 82012
>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 tagtactccttctgtcctaaaata 158 ||||||||||||||||| |||||| Sbjct: 82035 tagtactccttctgtcccaaaata 82012
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 tagtactccttctgtcctaaaata 158 ||||||||||||||||| |||||| Sbjct: 20354172 tagtactccttctgtcccaaaata 20354195
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 agtactccttctgtcctaaaataa 159 |||||||||||||||| ||||||| Sbjct: 20163271 agtactccttctgtcccaaaataa 20163294
>emb|BX816448.1|CNS0ADWQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH49ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1341 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 293 gtctggccaaaggaccagccggccggggcggcgttg 328 ||||||||| | ||||||||||| || ||||||||| Sbjct: 794 gtctggccataagaccagccggcaggagcggcgttg 759
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 tggtgacggtgcggccgtcg 352 |||||||||||||||||||| Sbjct: 658215 tggtgacggtgcggccgtcg 658196
>gb|AY089063.1| Arabidopsis thaliana clone 255048 mRNA, complete sequence Length = 1366 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gaaggtctggccaaaggaccagcc 312 ||||||||||||||| |||||||| Sbjct: 929 gaaggtctggccaaaagaccagcc 906
>gb|AY085242.1| Arabidopsis thaliana clone 14132 mRNA, complete sequence Length = 1235 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 293 gtctggccaaaggaccagccggccggggcggcgttg 328 ||||||||| | ||||||||||| || ||||||||| Sbjct: 820 gtctggccataagaccagccggcaggagcggcgttg 785
>gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis thaliana BAC T24P13 from chromosome I, complete sequence Length = 98630 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 293 gtctggccaaaggaccagccggccggggcggcgttg 328 ||||||||| | ||||||||||| || ||||||||| Sbjct: 60525 gtctggccataagaccagccggcaggagcggcgttg 60490
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 agtactccttctgtcctaaaataa 159 |||||||| ||||||||||||||| Sbjct: 65884 agtactccatctgtcctaaaataa 65907
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 ttgtagtactccttctgtcctaaaataa 159 ||||||||||||||| |||| ||||||| Sbjct: 81127 ttgtagtactccttccgtcccaaaataa 81154
>gb|AY954367.1| Streptomyces sp. NP13 clone 1 polyketide synthase gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ggtgacggtgcggccgtcgc 353 |||||||||||||||||||| Sbjct: 44 ggtgacggtgcggccgtcgc 25
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466B10 Length = 151806 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 agtactccttctgtcctaaaataa 159 |||||||||||||||| ||||||| Sbjct: 77299 agtactccttctgtcccaaaataa 77322
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 agtactccttctgtcctaaaataa 159 |||||||||||||||| ||||||| Sbjct: 33768 agtactccttctgtcccaaaataa 33791
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 agtactccttctgtcctaaaataa 159 |||||||||||||||| ||||||| Sbjct: 56771 agtactccttctgtcccaaaataa 56794
>gb|AY028946.1| Colletotrichum trifolii GTPase CDC42 (cdc42) gene, complete cds Length = 1523 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 gcgttgttgctggtgacggtgcgg 346 ||||||||| |||||||||||||| Sbjct: 568 gcgttgttgttggtgacggtgcgg 591
>emb|AJ744850.1| Streptomyces ribosidificus ribostamycin biosynthesis gene cluster, strain NRRL B-11466 Length = 43190 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ccagccggccggggcggcgt 326 |||||||||||||||||||| Sbjct: 40353 ccagccggccggggcggcgt 40372
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 tagtactccttctgtcctaaaata 158 ||||||||||||||||| |||||| Sbjct: 20664406 tagtactccttctgtcccaaaata 20664429
>emb|AL672036.6| Mouse DNA sequence from clone RP23-395P1 on chromosome X, complete sequence Length = 186034 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 aaataactgtctcaattttgtact 177 |||||||| ||||||||||||||| Sbjct: 27825 aaataactatctcaattttgtact 27848 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,308,526 Number of Sequences: 3902068 Number of extensions: 3308526 Number of successful extensions: 71721 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 71030 Number of HSP's gapped (non-prelim): 678 length of query: 358 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 336 effective length of database: 17,147,199,772 effective search space: 5761459123392 effective search space used: 5761459123392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
