ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet71g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
16PGL_HUMAN (O95336) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 44 2e-04
26PGL_MOUSE (Q9CQ60) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 44 3e-04
36PGL_DROME (Q9VZ64) Putative 6-phosphogluconolactonase (EC 3.1.1... 36 0.057
46PGL_SYNY3 (P74618) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 35 0.13
56PGL_SCHPO (O74455) Probable 6-phosphogluconolactonase (EC 3.1.1... 33 0.28
6SOL3_YEAST (P38858) Probable 6-phosphogluconolactonase 3 (EC 3.1... 31 1.8
7WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interactin... 31 1.8
86PGL_MYCTU (P63338) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 31 1.8
96PGL_MYCBO (P63339) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 31 1.8
10MUC2L_RAT (P98089) Intestinal mucin-like protein (MLP) (Fragment) 30 2.4
11Y1440_MYCBO (P64842) Hypothetical protein Mb1440c precursor 30 3.1
12Y1405_MYCTU (P64841) Hypothetical protein Rv1405c/MT1449 precursor 30 3.1
136PGL_ACTAC (P70715) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 30 4.1
14DNAE2_BRAJA (Q89QU8) Error-prone DNA polymerase (EC 2.7.7.7) 29 6.9
15KSR2_HUMAN (Q6VAB6) Kinase suppressor of ras-2 (hKSR2) 28 9.1

>6PGL_HUMAN (O95336) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 258

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -3

Query: 469 TFTFPVINSSAYVAMVVTGAGKAGAVQKAISDKKTSDLLPVEMAVLDDGEFTWFTDKEAV 290
           T T PV+N++  V  V TG GKA  +++ + D++ +  LP  +     G+  WF D+ A 
Sbjct: 187 TLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENP-LPAALVQPHTGKLCWFLDEAAA 245

Query: 289 SML 281
            +L
Sbjct: 246 RLL 248



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>6PGL_MOUSE (Q9CQ60) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 257

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = -3

Query: 469 TFTFPVINSSAYVAMVVTGAGKAGAVQKAISDKKTSDLLPVEMAVLDDGEFTWFTDKEAV 290
           T T PV+N++  +  V TG GKA  +++ + DK+ +  LP  +     G   WF D+ A 
Sbjct: 187 TLTLPVLNAAQSIIFVATGEGKAAVLKRILEDKEGT--LPAALVQPRTGALCWFLDEAAA 244

Query: 289 SML 281
            +L
Sbjct: 245 RLL 247



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>6PGL_DROME (Q9VZ64) Putative 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 243

 Score = 35.8 bits (81), Expect = 0.057
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = -3

Query: 469 TFTFPVINSSAYVAMVVTGAGKAGAVQKAISD 374
           TFT P+IN +  VA VVTGA KA  V+    D
Sbjct: 179 TFTLPLINKARNVAFVVTGAAKASVVKSVFVD 210



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>6PGL_SYNY3 (P74618) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 239

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -3

Query: 469 TFTFPVINSSAYVAMVVTGAGKAGAVQKAISDKKTSDLLPVEMAVLDDGEFTWFTDKEA 293
           TFT P+IN +  V  +V GA K  A+ +  + +      P    +   GE  W  D++A
Sbjct: 176 TFTIPLINRARSVVFLVAGASKQHALGEIFAPEADPQQYPARF-IQPQGELIWLLDQQA 233



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>6PGL_SCHPO (O74455) Probable 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 257

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 22/64 (34%), Positives = 31/64 (48%)
 Frame = -3

Query: 469 TFTFPVINSSAYVAMVVTGAGKAGAVQKAISDKKTSDLLPVEMAVLDDGEFTWFTDKEAV 290
           T T PV+  +  +A V TGAGK   +   I D  TS L    +   +    +WF D EA 
Sbjct: 186 TLTLPVVTHAQAIAFVTTGAGKKDILPIVIED-FTSKLPSALITRNNLTRTSWFVDDEAS 244

Query: 289 SMLQ 278
           + L+
Sbjct: 245 ANLE 248



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>SOL3_YEAST (P38858) Probable 6-phosphogluconolactonase 3 (EC 3.1.1.31) (6PGL)|
          Length = 280

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -3

Query: 469 TFTFPVINSSAYVAMVVTGAGKAGAVQKAISDKKTSDLLPVEMAVLDDGEFT-WFTDKEA 293
           TFT PV+  +  +  V  G+ K   + +    K  +D LP  +     GE T WF ++EA
Sbjct: 214 TFTLPVLKDAKALCFVAEGSSKQNIMHEIFDLK--NDQLPTALVNKLFGEKTSWFVNEEA 271

Query: 292 VSMLQ 278
              +Q
Sbjct: 272 FGKVQ 276



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>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +1

Query: 256 SPWDSLSSAASTPPPCR*TR*ILHRQAQPSQRGANQKFSCPKS--PSAQHQLSQPQLPPW 429
           +P  +L      PPP    R  +HR+A P     N K   P +  PSA  Q   P  PP 
Sbjct: 255 TPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS 314

Query: 430 R 432
           R
Sbjct: 315 R 315



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>6PGL_MYCTU (P63338) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 247

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -3

Query: 469 TFTFPVINSSAYVAMVVTGAGKAGAVQKAISDKKTSDLLPVEMAVLDDGEFT-WFTDKEA 293
           T T P I  S  V ++V+G GKA AV  AI     +D + V  A     + T W  D++A
Sbjct: 185 TLTLPAIQRSREVWLLVSGPGKADAVAAAIGG---ADPVSVPAAGAVGRQNTLWLLDRDA 241

Query: 292 VSML 281
            + L
Sbjct: 242 AAKL 245



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>6PGL_MYCBO (P63339) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 247

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -3

Query: 469 TFTFPVINSSAYVAMVVTGAGKAGAVQKAISDKKTSDLLPVEMAVLDDGEFT-WFTDKEA 293
           T T P I  S  V ++V+G GKA AV  AI     +D + V  A     + T W  D++A
Sbjct: 185 TLTLPAIQRSREVWLLVSGPGKADAVAAAIGG---ADPVSVPAAGAVGRQNTLWLLDRDA 241

Query: 292 VSML 281
            + L
Sbjct: 242 AAKL 245



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>MUC2L_RAT (P98089) Intestinal mucin-like protein (MLP) (Fragment)|
          Length = 837

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/53 (32%), Positives = 20/53 (37%)
 Frame = +1

Query: 268 SLSSAASTPPPCR*TR*ILHRQAQPSQRGANQKFSCPKSPSAQHQLSQPQLPP 426
           S  S  STPPP   T     +   PS        S P +P +    S P  PP
Sbjct: 15  SCPSTPSTPPPSTPTTPTSSQTTTPSTPSTTSSKSTPSTPQSTSSKSTPSTPP 67



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>Y1440_MYCBO (P64842) Hypothetical protein Mb1440c precursor|
          Length = 274

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -2

Query: 452 DQLLCICRHGGNWGWESWCCAEGDFGQ 372
           D+L+ +CR GG  G  SW C EG FG+
Sbjct: 135 DELVRVCRPGGTIGVISWTC-EGFFGR 160



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>Y1405_MYCTU (P64841) Hypothetical protein Rv1405c/MT1449 precursor|
          Length = 274

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -2

Query: 452 DQLLCICRHGGNWGWESWCCAEGDFGQ 372
           D+L+ +CR GG  G  SW C EG FG+
Sbjct: 135 DELVRVCRPGGTIGVISWTC-EGFFGR 160



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>6PGL_ACTAC (P70715) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 232

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = -3

Query: 463 TFPVINSSAYVAMVVTGAGKAGAVQKAISDKKTSDLLPVEMAVLDDGEFTWFTDKEAVSM 284
           T  +I  +  +  +VTG GKA  +++  S    +   P       +G   W+ DK+A  +
Sbjct: 172 TAKLIEQAKRITYLVTGEGKAEILKEIQSTPAENLPYPAAKIYAKNGVTEWYLDKDAAKL 231

Query: 283 L 281
           L
Sbjct: 232 L 232



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>DNAE2_BRAJA (Q89QU8) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 1151

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 317 EFSIVKHSHLNGEQIRSFLVRNRLLHSTSFPSPSYHHG 430
           E +IV+   + G+ +  +L R       ++PSPS  HG
Sbjct: 613 EVAIVRPGPIQGDMVHPYLRRRNGQEKVNYPSPSPEHG 650



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>KSR2_HUMAN (Q6VAB6) Kinase suppressor of ras-2 (hKSR2)|
          Length = 829

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +1

Query: 325 HRQAQPSQRGANQKFSCPKSPSAQHQLSQPQLPPWRHMQRS*SPGT 462
           HR   PS R  +   + P++P+    ++ P  PP R   +   PGT
Sbjct: 124 HRSLPPSPRQRHAVRTPPRTPNIVTTVTPPGTPPMRKKNKLKPPGT 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,988,790
Number of Sequences: 219361
Number of extensions: 1333600
Number of successful extensions: 2943
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2942
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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