ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet71f03 |
|---|---|
| Clone Library Name | barley_pub |
>PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 152 bits (383), Expect = 4e-37 Identities = 78/80 (97%), Positives = 78/80 (97%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ DK Sbjct: 180 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQR-DK 238 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGAKKFVENAAGSFSVA Sbjct: 239 RWFKGAKKFVENAAGSFSVA 258
>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 267 Score = 145 bits (365), Expect = 5e-35 Identities = 70/79 (88%), Positives = 74/79 (93%) Frame = -3 Query: 414 VATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKR 235 VA+ANVLESS PVVDGKQYYSITVLTRTADGDEGGKHQ+I ATV DGKLY+CKAQAGDKR Sbjct: 189 VASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICKAQAGDKR 248 Query: 234 WFKGAKKFVENAAGSFSVA 178 WFKGAKKFVE+A SFSVA Sbjct: 249 WFKGAKKFVESATSSFSVA 267
>PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 259 Score = 143 bits (361), Expect = 1e-34 Identities = 68/80 (85%), Positives = 75/80 (93%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVA AN+LESSAPV+ GKQYY+I+VLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDK Sbjct: 180 AVAVANILESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDGKLYICKAQAGDK 239 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGA+KFVE+ A SFSVA Sbjct: 240 RWFKGARKFVEDTASSFSVA 259
>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 139 bits (350), Expect = 3e-33 Identities = 67/80 (83%), Positives = 74/80 (92%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVATAN+LE+S+ V GKQYY ++VLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDK Sbjct: 181 AVATANLLEASSATVGGKQYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDK 240 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGAKKFVENAA SFS+A Sbjct: 241 RWFKGAKKFVENAATSFSIA 260
>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 138 bits (348), Expect = 5e-33 Identities = 67/80 (83%), Positives = 72/80 (90%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AV TAN+LE+S PVV GK YYSI VLTRTADGDEGGKH LITATV+DGKLY+CKAQAGDK Sbjct: 186 AVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKLYICKAQAGDK 245 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGAKKFVE+AA SFS A Sbjct: 246 RWFKGAKKFVESAASSFSAA 265
>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 136 bits (342), Expect = 2e-32 Identities = 65/80 (81%), Positives = 73/80 (91%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVAT N+LE+S+ V GK+YY ++VLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDK Sbjct: 179 AVATRNLLEASSATVGGKEYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDK 238 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGAKKFVENAA SFS+A Sbjct: 239 RWFKGAKKFVENAATSFSIA 258
>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (OEC23) Length = 263 Score = 135 bits (341), Expect = 3e-32 Identities = 65/80 (81%), Positives = 73/80 (91%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVATAN+LE++A V+GK YY ++VLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDK Sbjct: 184 AVATANILEATASNVNGKDYYFVSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDK 243 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGA+KFVE AA SFSVA Sbjct: 244 RWFKGARKFVEGAASSFSVA 263
>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 264 Score = 134 bits (337), Expect = 9e-32 Identities = 63/80 (78%), Positives = 72/80 (90%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 +VATAN+LE S PVV GKQYY+I+VLTRTADGDEGGKH +I+ATV DGKLY+CKAQAGDK Sbjct: 185 SVATANILEVSTPVVGGKQYYNISVLTRTADGDEGGKHHVISATVTDGKLYICKAQAGDK 244 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGAKKFVE+ SF+VA Sbjct: 245 RWFKGAKKFVESTTTSFNVA 264
>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 134 bits (336), Expect = 1e-31 Identities = 64/80 (80%), Positives = 72/80 (90%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVATAN+LE+S + GK+YY ++VLTRTADGDEGGKHQLITATV GKLY+CKAQAGDK Sbjct: 186 AVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDK 245 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGA+KFVENAA SFSVA Sbjct: 246 RWFKGARKFVENAATSFSVA 265
>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 268 Score = 133 bits (334), Expect = 2e-31 Identities = 64/80 (80%), Positives = 73/80 (91%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVATAN+LE+S+ V GK+YY ++VLTRTADGDEGGKHQLI+ATV GKLY+CKAQAGDK Sbjct: 189 AVATANLLETSSSTVGGKEYYILSVLTRTADGDEGGKHQLISATVNGGKLYICKAQAGDK 248 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGA+KFVENAA SFSVA Sbjct: 249 RWFKGARKFVENAATSFSVA 268
>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 263 Score = 132 bits (333), Expect = 3e-31 Identities = 65/80 (81%), Positives = 72/80 (90%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVATAN+LESS+ V GK YY ++VLTRTADGDEGGKHQLITATV GKLY+CKAQAGDK Sbjct: 184 AVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDK 243 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGA+KFVE+AA SFSVA Sbjct: 244 RWFKGARKFVESAATSFSVA 263
>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 266 Score = 132 bits (331), Expect = 4e-31 Identities = 63/80 (78%), Positives = 71/80 (88%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVA ANVLE+S V GKQYY +++LTRTADG+EGGKHQL+TATV DGKLY+CKAQAGDK Sbjct: 187 AVAIANVLETSTAEVGGKQYYYLSILTRTADGNEGGKHQLVTATVNDGKLYICKAQAGDK 246 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGAKKFVEN A SFS+A Sbjct: 247 RWFKGAKKFVENTATSFSLA 266
>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 265 Score = 130 bits (328), Expect = 1e-30 Identities = 64/80 (80%), Positives = 71/80 (88%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVA ANVLE+S+ V GK YY ++VLTRTADG+EGGKHQLITATV DGKLY+CKAQAGDK Sbjct: 186 AVAIANVLETSSAEVGGKPYYYLSVLTRTADGNEGGKHQLITATVNDGKLYICKAQAGDK 245 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGAKKFVEN A SFS+A Sbjct: 246 RWFKGAKKFVENTATSFSLA 265
>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 128 bits (321), Expect = 6e-30 Identities = 63/80 (78%), Positives = 69/80 (86%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVATAN+LE++ V GK YY ++VLTRTADGDEGGKHQLITATV GKLY+CKAQAGDK Sbjct: 181 AVATANILETNIQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDK 240 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGA KFVE AA SFSVA Sbjct: 241 RWFKGANKFVEKAATSFSVA 260
>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 217 Score = 125 bits (313), Expect = 5e-29 Identities = 62/80 (77%), Positives = 68/80 (85%) Frame = -3 Query: 417 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 238 AVATAN+LE++ V GK YY ++VLTRTAD DEGGKHQLITATV GKLY+CKAQAGDK Sbjct: 138 AVATANILETNIQDVGGKPYYYLSVLTRTADEDEGGKHQLITATVNGGKLYICKAQAGDK 197 Query: 237 RWFKGAKKFVENAAGSFSVA 178 RWFKGA KFVE AA SFSVA Sbjct: 198 RWFKGANKFVEKAATSFSVA 217
>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) Length = 245 Score = 83.6 bits (205), Expect = 2e-16 Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 2/80 (2%) Frame = -3 Query: 414 VATANVLESSAPV-VDGKQYYSITVLTRTADGDEGGKHQLITATV-ADGKLYVCKAQAGD 241 V+ A++L+ S GK YY +L R+ADGDEGG+HQLI ATV +D KLY+ K Q GD Sbjct: 165 VSAASLLDVSTTTDKKGKTYYKYELLVRSADGDEGGRHQLIGATVGSDNKLYIIKIQIGD 224 Query: 240 KRWFKGAKKFVENAAGSFSV 181 KRWFKGAKK A SF+V Sbjct: 225 KRWFKGAKKEAMGAFDSFTV 244
>MTP_PIG (Q865F1) Microsomal triglyceride transfer protein large subunit| precursor Length = 894 Score = 31.6 bits (70), Expect = 0.80 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = -3 Query: 351 ITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 217 + +L R+ DGD+ QLI T+ D K+ Q G+K FKG K Sbjct: 65 VVLLWRSPDGDDD---QLIQITIKDVKVENVNQQRGEKSIFKGKK 106
>NUOG_PSEFL (Q9KGW3) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 904 Score = 30.8 bits (68), Expect = 1.4 Identities = 21/66 (31%), Positives = 31/66 (46%) Frame = -3 Query: 411 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRW 232 A A+ L++SAP VDG + + R AD K LI A + G + +A A + Sbjct: 456 AVAHALDASAPAVDGLDSEAAALAQRIADALLAAKRPLIIAGTSLGSKALIEAAANIAKA 515 Query: 231 FKGAKK 214 K +K Sbjct: 516 LKLREK 521
>NLAL1_ARATH (Q8VZT0) Putative H/ACA ribonucleoprotein complex subunit 1-like| protein 1 Length = 202 Score = 30.8 bits (68), Expect = 1.4 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +1 Query: 97 HACPGSVSTRCFPEEIP-LNSPIGHVYLCDTEGSCGVLDELLGALEPPLVSGLRLADVEL 273 HAC G T+ E+IP N+PI YL + + G +DE+ G + L S +++ + + Sbjct: 66 HACEGDAVTKLSQEKIPHFNAPI---YL-ENKTQIGKVDEIFGPINESLFS-IKMMEGIV 120 Query: 274 AVGDGGGDELVL 309 A GD+ + Sbjct: 121 ATSYSPGDKFFI 132
>MTP_BOVIN (P55156) Microsomal triglyceride transfer protein large subunit| precursor (Fragment) Length = 887 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = -3 Query: 351 ITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 217 + +L R+ DGD+ +QLI T+ D L Q G+K FKG K Sbjct: 58 VALLWRSPDGDD---NQLIQITMKDVNLENVNQQRGEKSIFKGKK 99
>TL30_ARATH (O49292) Thylakoid lumenal 29.8 kDa protein, chloroplast precursor| Length = 274 Score = 29.6 bits (65), Expect = 3.0 Identities = 22/73 (30%), Positives = 31/73 (42%) Frame = -3 Query: 399 VLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGA 220 VL S+ DG+ YY + H LITAT A +LY+ +W K Sbjct: 211 VLSSNVAEHDGRLYYQFELEP---------PHVLITATAAGNRLYLFSVTGNGLQW-KRH 260 Query: 219 KKFVENAAGSFSV 181 K ++ A SF + Sbjct: 261 YKDLKRIASSFRI 273
>PHSL_DESBA (P13065) Periplasmic [NiFeSe] hydrogenase large subunit (EC| 1.12.99.6) (NiFeSe hydrogenlyase large chain) Length = 513 Score = 28.9 bits (63), Expect = 5.2 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = -3 Query: 393 ESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFK 226 +++ P DGK SI LTR EG H I V DGK+ K G R F+ Sbjct: 2 QAATPAADGKVKISIDPLTRV----EG--HLKIEVEVKDGKVVDAKCSGGMFRGFE 51
>NUOG_ECOLI (P33602) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) (NUO7) Length = 907 Score = 28.5 bits (62), Expect = 6.7 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = -3 Query: 411 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRW 232 A A+ L++SAP VDG + + + G K LI + G L V +A A + Sbjct: 459 AIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKA 518 Query: 231 FKG 223 KG Sbjct: 519 LKG 521
>NUOG_ECO57 (Q8XCX2) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 907 Score = 28.5 bits (62), Expect = 6.7 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = -3 Query: 411 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRW 232 A A+ L++SAP VDG + + + G K LI + G L V +A A + Sbjct: 459 AIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKA 518 Query: 231 FKG 223 KG Sbjct: 519 LKG 521
>RF1_PICTO (Q6KZ24) Peptide chain release factor subunit 1 (Translation| termination factor aRF1) Length = 410 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 43 REIDLLVHPSSCTNQRNTHACPGSVSTRCFPEEIPLNSPIGHVYLCDTEGS 195 + +DLL+ + +R T+ CP T+ F E+ P +P LCD + S Sbjct: 309 KNLDLLIISDTLKKRRYTYKCPVCNDTKTFTEK-PRETP-----LCDKDNS 353
>MDH_MORS5 (P48364) Malate dehydrogenase (EC 1.1.1.37)| Length = 312 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +1 Query: 241 VSGLRLADVELAVGDGGGDELVLPSLVSVRGPGEHRYAVVLLTVHHRRRALEHV 402 + G+ LADVE+ V G +LP L V+G VV LT + E V Sbjct: 161 LKGISLADVEVPVIGGHSGVTILPLLSQVKGVEFTAEEVVALTARIQNAGTEVV 214
>NUOG_PSESM (Q87ZQ4) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 905 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = -3 Query: 411 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQA 247 A A+ L++SAP V+G ++ + R AD K LI + + G + +A A Sbjct: 457 AVAHALDASAPAVEGLDSEALELAQRIADALLAAKRPLIISGSSLGSTALIEAAA 511
>TRRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associated protein| (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog) Length = 3859 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = +1 Query: 130 FPEEIPLNSP----IGHVYLCDTEGSCGVLDELLGALEPPLVSGLRLA 261 FPE++ LN+ + +VY +T EL LEP +SGLR A Sbjct: 2407 FPEDLELNAQFLDLVNYVYRDETLSG----SELTAKLEPAFLSGLRCA 2450
>DFA6_ANASP (Q8YQE2) Putative diflavin flavoprotein A 6 (EC 1.-.-.-)| Length = 570 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = -3 Query: 414 VATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKL 268 VATA S + D Y +V R GD H L+ ATV +GK+ Sbjct: 508 VATAEAENGSPVLQDALAYLECSVQNRMESGD----HWLVYATVENGKV 552 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,898,176 Number of Sequences: 219361 Number of extensions: 1038997 Number of successful extensions: 2579 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2521 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2576 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
