ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet71e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104614.1| Zea mays PCO084486 mRNA sequence 78 1e-11
2ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA 68 1e-08
3ref|XM_507457.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
4ref|XM_507456.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
5ref|XM_507455.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
6ref|XM_507454.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
7ref|XM_507453.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
8ref|XM_507452.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
9ref|XM_507451.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
10ref|XM_507450.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
11ref|XM_507449.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
12ref|XM_507448.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
13ref|XM_464480.1| Oryza sativa (japonica cultivar-group), mRNA 68 1e-08
14ref|XM_507447.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
15ref|XM_507446.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
16ref|XM_507445.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
17ref|XM_507444.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
18ref|XM_507443.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
19ref|XM_507442.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
20ref|XM_507441.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
21ref|XM_506748.2| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
23dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
24dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
25dbj|AK109398.2| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
26dbj|AK119554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
27dbj|AK106085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
28dbj|AK104557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
29dbj|AK104535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
30dbj|AK104522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
31dbj|AK104734.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
32dbj|AK104646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
33dbj|AK104636.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
34dbj|AK104469.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
35dbj|AK104458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
36dbj|AK104446.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
37dbj|AK104392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
38dbj|AK104385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
39dbj|AK104348.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
40dbj|AK104215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
41dbj|AK104096.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
42dbj|AK068102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
43dbj|AK060970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
44dbj|AK060143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
45ref|NM_001036140.1| Arabidopsis thaliana LHCA3*1 AT1G61520 (LHCA... 56 5e-05
46ref|NM_104833.2| Arabidopsis thaliana LHCA3*1; chlorophyll bindi... 56 5e-05
47gb|AY093370.1| Arabidopsis thaliana PSI type III chlorophyll a/b... 56 5e-05
48gb|AY059879.1| Arabidopsis thaliana PSI type III chlorophyll a/b... 56 5e-05
49emb|BX813509.1|CNS0AEAC Arabidopsis thaliana Full-length cDNA Co... 56 5e-05
50emb|BX815672.1|CNS0ABGC Arabidopsis thaliana Full-length cDNA Co... 56 5e-05
51emb|BX814451.1|CNS0ACBS Arabidopsis thaliana Full-length cDNA Co... 56 5e-05
52emb|BX813755.1|CNS0ACAQ Arabidopsis thaliana Full-length cDNA Co... 56 5e-05
53emb|BX814367.1|CNS0AC2R Arabidopsis thaliana Full-length cDNA Co... 56 5e-05
54emb|BX815288.1|CNS0ABIY Arabidopsis thaliana Full-length cDNA Co... 56 5e-05
55emb|BX815605.1|CNS0ABBI Arabidopsis thaliana Full-length cDNA Co... 56 5e-05
56gb|AY086439.1| Arabidopsis thaliana clone 25124 mRNA, complete s... 56 5e-05
57gb|AC005850.1| Arabidopsis thaliana chromosome I BAC T25B24 geno... 56 5e-05
58gb|U01103.1|U01103 Arabidopsis thaliana PSI type III chlorophyll... 56 5e-05
59gb|AY194366.1| Vitis vinifera chlorophyll a/b binding protein (L... 52 8e-04
60emb|BX814384.1|CNS0AC3S Arabidopsis thaliana Full-length cDNA Co... 48 0.012
61dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-... 48 0.012
62gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds 44 0.19
63dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
64emb|AL589767.10| Mouse DNA sequence from clone RP23-141L16 on ch... 44 0.19
65gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.19
66emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 44 0.19
67gb|AC009484.3| Homo sapiens BAC clone RP11-313O11 from 2, comple... 42 0.74
68dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 0.74
69gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Can... 40 2.9
70ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predic... 40 2.9
71ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predic... 40 2.9
72emb|CR926467.10| Zebrafish DNA sequence from clone DKEYP-20G2 in... 40 2.9
73emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chl... 40 2.9
74emb|CR450794.8| Zebrafish DNA sequence from clone CH211-259I2 in... 40 2.9
75emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chloro... 40 2.9
76emb|Z35600.1|CEF37A8 Caenorhabditis elegans Cosmid F37A8, comple... 40 2.9
77emb|Z35601.1|CER10E9 Caenorhabditis elegans Cosmid R10E9, comple... 40 2.9
78emb|BX649366.5| Zebrafish DNA sequence from clone DKEY-16I5 in l... 40 2.9
79gb|AY100470.1| Oryza sativa (indica cultivar-group) putative sol... 40 2.9
80ref|NM_065396.2| Caenorhabditis elegans R10E9.3 (R10E9.3) mRNA, ... 40 2.9
81dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
82dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
83gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cance... 40 2.9
84dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
85dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
86dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
87dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
88emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b bin... 40 2.9
89emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on ch... 40 2.9
90emb|AJ507163.1|HEC507163 Hepatitis C virus partial gene for poly... 40 2.9
91dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
92dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
93emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll ... 40 2.9
94emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chloro... 40 2.9
95emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein 40 2.9
96emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlo... 40 2.9
97dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
98dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
99dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
100dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
101dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
102dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
103dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
104dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
105dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
106dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
107dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
108gb|AY109324.1| Zea mays CL187_1 mRNA sequence 40 2.9
109gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protei... 40 2.9
110gb|U43707.1|PAU43707 Picea abies chlorophyll a/b binding protein... 40 2.9
111gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast c... 40 2.9
112gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b ... 40 2.9
113dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRN... 40 2.9 
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence
          Length = 1214

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 176 ctagtggaacttgaggctggtgaggatgttgttgttgacggggtcgg 222
           |||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 981 ctagtggaacttgaggctggtgagcacgttgttgttgacggggtcgg 935
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>ref|XM_464478.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 988

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
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>ref|XM_507457.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1078

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
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>ref|XM_507456.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1121

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
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>ref|XM_507455.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1112

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 857 tggaacttgaggctggtgaggatgttgttgtggacggg 820
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>ref|XM_507454.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1121

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 866 tggaacttgaggctggtgaggatgttgttgtggacggg 829
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>ref|XM_507453.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1127

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 872 tggaacttgaggctggtgaggatgttgttgtggacggg 835
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>ref|XM_507452.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1127

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 872 tggaacttgaggctggtgaggatgttgttgtggacggg 835
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>ref|XM_507451.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1129

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
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>ref|XM_507450.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1129

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
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>ref|XM_507449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1129

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
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>ref|XM_507448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1129

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
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>ref|XM_464480.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1017

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 762 tggaacttgaggctggtgaggatgttgttgtggacggg 725
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>ref|XM_507447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1145

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 890 tggaacttgaggctggtgaggatgttgttgtggacggg 853
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>ref|XM_507446.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1145

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 890 tggaacttgaggctggtgaggatgttgttgtggacggg 853
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>ref|XM_507445.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1148

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 893 tggaacttgaggctggtgaggatgttgttgtggacggg 856
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>ref|XM_507444.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1148

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 893 tggaacttgaggctggtgaggatgttgttgtggacggg 856
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>ref|XM_507443.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1151

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 896 tggaacttgaggctggtgaggatgttgttgtggacggg 859
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>ref|XM_507442.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1168

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 913 tggaacttgaggctggtgaggatgttgttgtggacggg 876
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>ref|XM_507441.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1198

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 943 tggaacttgaggctggtgaggatgttgttgtggacggg 906
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>ref|XM_506748.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2
           mRNA
          Length = 1129

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 873 tggaacttgaggctggtgaggatgttgttgtggacggg 836
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                     
Query: 180     tggaacttgaggctggtgaggatgttgttgttgacggg 217
               ||||||||||||||||||||||||||||||| ||||||
Sbjct: 5468903 tggaacttgaggctggtgaggatgttgttgtggacggg 5468940
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>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1524_D08
          Length = 143046

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                    
Query: 180    tggaacttgaggctggtgaggatgttgttgttgacggg 217
              ||||||||||||||||||||||||||||||| ||||||
Sbjct: 122484 tggaacttgaggctggtgaggatgttgttgtggacggg 122521
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>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0026H03
          Length = 151827

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                   
Query: 180   tggaacttgaggctggtgaggatgttgttgttgacggg 217
             ||||||||||||||||||||||||||||||| ||||||
Sbjct: 13638 tggaacttgaggctggtgaggatgttgttgtggacggg 13675
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>dbj|AK109398.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A11, full
           insert sequence
          Length = 1128

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 873 tggaacttgaggctggtgaggatgttgttgtggacggg 836
to top
>dbj|AK119554.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E06, full
           insert sequence
          Length = 1129

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
to top
>dbj|AK106085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B02, full
           insert sequence
          Length = 1198

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 943 tggaacttgaggctggtgaggatgttgttgtggacggg 906
to top
>dbj|AK104557.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G04, full
           insert sequence
          Length = 1112

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 857 tggaacttgaggctggtgaggatgttgttgtggacggg 820
to top
>dbj|AK104535.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E04, full
           insert sequence
          Length = 1148

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 893 tggaacttgaggctggtgaggatgttgttgtggacggg 856
to top
>dbj|AK104522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E10, full
           insert sequence
          Length = 1078

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
to top
>dbj|AK104734.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C11, full
           insert sequence
          Length = 1121

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 866 tggaacttgaggctggtgaggatgttgttgtggacggg 829
to top
>dbj|AK104646.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H01, full
           insert sequence
          Length = 1127

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 872 tggaacttgaggctggtgaggatgttgttgtggacggg 835
to top
>dbj|AK104636.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D09, full
           insert sequence
          Length = 1126

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 871 tggaacttgaggctggtgaggatgttgttgtggacggg 834
to top
>dbj|AK104469.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D06, full
           insert sequence
          Length = 1145

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 890 tggaacttgaggctggtgaggatgttgttgtggacggg 853
to top
>dbj|AK104458.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B05, full
           insert sequence
          Length = 1129

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
to top
>dbj|AK104446.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B11, full
           insert sequence
          Length = 1148

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 893 tggaacttgaggctggtgaggatgttgttgtggacggg 856
to top
>dbj|AK104392.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H10, full
           insert sequence
          Length = 1151

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 896 tggaacttgaggctggtgaggatgttgttgtggacggg 859
to top
>dbj|AK104385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-E04, full
           insert sequence
          Length = 1121

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
to top
>dbj|AK104348.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F11, full
           insert sequence
          Length = 1145

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 890 tggaacttgaggctggtgaggatgttgttgtggacggg 853
to top
>dbj|AK104215.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H02, full
           insert sequence
          Length = 1129

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
to top
>dbj|AK104096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B04, full
           insert sequence
          Length = 1129

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
to top
>dbj|AK068102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130I24, full
           insert sequence
          Length = 1017

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 762 tggaacttgaggctggtgaggatgttgttgtggacggg 725
to top
>dbj|AK060970.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D07, full
           insert sequence
          Length = 1168

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 913 tggaacttgaggctggtgaggatgttgttgtggacggg 876
to top
>dbj|AK060143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A02, full
           insert sequence
          Length = 988

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 180 tggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||||||||||||||| ||||||
Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacggg 837
to top
>ref|NM_001036140.1| Arabidopsis thaliana LHCA3*1 AT1G61520 (LHCA3*1) transcript variant
            AT1G61520.2 mRNA, complete cds
          Length = 1311

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 178  agtggaacttgaggctggtgaggatgttgttgttgacggg 217
            ||||||||||||||||||| | || |||||||||||||||
Sbjct: 1075 agtggaacttgaggctggtcaagacgttgttgttgacggg 1036
to top
>ref|NM_104833.2| Arabidopsis thaliana LHCA3*1; chlorophyll binding AT1G61520
           (LHCA3*1) transcript variant AT1G61520.1 mRNA, complete
           cds
          Length = 1198

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 962 agtggaacttgaggctggtcaagacgttgttgttgacggg 923
to top
>gb|AY093370.1| Arabidopsis thaliana PSI type III chlorophyll a/b-binding protein
           (At1g61520) mRNA, complete cds
          Length = 887

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 820 agtggaacttgaggctggtcaagacgttgttgttgacggg 781
to top
>gb|AY059879.1| Arabidopsis thaliana PSI type III chlorophyll a/b-binding protein
           (At1g61520; T25B24.12) mRNA, complete cds
          Length = 1070

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 908 agtggaacttgaggctggtcaagacgttgttgttgacggg 869
to top
>emb|BX813509.1|CNS0AEAC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZB01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 348

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 188 agtggaacttgaggctggtcaagacgttgttgttgacggg 149
to top
>emb|BX815672.1|CNS0ABGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS82ZC08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 306

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 185 agtggaacttgaggctggtcaagacgttgttgttgacggg 146
to top
>emb|BX814451.1|CNS0ACBS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB74ZF09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 336

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 172 agtggaacttgaggctggtcaagacgttgttgttgacggg 133
to top
>emb|BX813755.1|CNS0ACAQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB38ZE09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 408

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 244 agtggaacttgaggctggtcaagacgttgttgttgacggg 205
to top
>emb|BX814367.1|CNS0AC2R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB6ZG03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 492

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 341 agtggaacttgaggctggtcaagacgttgttgttgacggg 302
to top
>emb|BX815288.1|CNS0ABIY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS4ZB04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1029

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 898 agtggaacttgaggctggtcaagacgttgttgttgacggg 859
to top
>emb|BX815605.1|CNS0ABBI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS76ZH02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 338

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 188 agtggaacttgaggctggtcaagacgttgttgttgacggg 149
to top
>gb|AY086439.1| Arabidopsis thaliana clone 25124 mRNA, complete sequence
          Length = 1105

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 965 agtggaacttgaggctggtcaagacgttgttgttgacggg 926
to top
>gb|AC005850.1| Arabidopsis thaliana chromosome I BAC T25B24 genomic sequence, complete
             sequence
          Length = 84432

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 178   agtggaacttgaggctggtgaggatgttgttgttgacggg 217
             ||||||||||||||||||| | || |||||||||||||||
Sbjct: 70494 agtggaacttgaggctggtcaagacgttgttgttgacggg 70533
to top
>gb|U01103.1|U01103 Arabidopsis thaliana PSI type III chlorophyll a/b-binding protein
           (Lhca3*1) mRNA, complete cds
          Length = 1054

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||||||||||
Sbjct: 898 agtggaacttgaggctggtcaagacgttgttgttgacggg 859
to top
>gb|AY194366.1| Vitis vinifera chlorophyll a/b binding protein (Lhca3) mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 646

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 179 gtggaacttgaggctggtgaggatgttgttgttgacggggtc 220
           |||||||||||||||||| | ||| ||||||||||| |||||
Sbjct: 496 gtggaacttgaggctggttatgatattgttgttgacagggtc 455
to top
>emb|BX814384.1|CNS0AC3S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB70ZF12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 576

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 178 agtggaacttgaggctggtgaggatgttgttgttgacggg 217
           ||||||||||||||||||| | || |||||||| ||||||
Sbjct: 453 agtggaacttgaggctggtcaagacgttgttgtggacggg 414
to top
>dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-harvesting
            chlorophyll-a/b protein of photosystem I (Type III),
            complete cds
          Length = 2389

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 193  tggtgaggatgttgttgttgacggggtc 220
            |||| |||||||||||||||||||||||
Sbjct: 2224 tggtcaggatgttgttgttgacggggtc 2197
to top
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds
          Length = 1044

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 203 gttgttgttgacggggtcggaaaggt 228
           ||||||||||||||||||||| ||||
Sbjct: 825 gttgttgttgacggggtcggagaggt 800
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 193    tggtgaggatgttgttgttgacggggtcgg 222
              ||||||||||| ||||| ||||||||||||
Sbjct: 248489 tggtgaggatgatgttggtgacggggtcgg 248460
to top
>emb|AL589767.10| Mouse DNA sequence from clone RP23-141L16 on chromosome X, complete
             sequence
          Length = 79904

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 32    cgatataaatattacaagcatgcacg 57
             ||||||||||||||||| ||||||||
Sbjct: 74405 cgatataaatattacaaacatgcacg 74430
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 193    tggtgaggatgttgttgttgacggggtcgg 222
              ||||||||||| ||||| ||||||||||||
Sbjct: 248489 tggtgaggatgatgttggtgacggggtcgg 248460
to top
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 193   tggtgaggatgttgttgttgacggggtcgg 222
             ||||||||||| ||||| ||||||||||||
Sbjct: 56504 tggtgaggatgatgttggtgacggggtcgg 56533
to top
>gb|AC009484.3| Homo sapiens BAC clone RP11-313O11 from 2, complete sequence
          Length = 206074

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   tataaatattacaagcatgca 55
            |||||||||||||||||||||
Sbjct: 8443 tataaatattacaagcatgca 8463
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 191     gctggtgaggatgttgttgttgacg 215
               |||| ||||||||||||||||||||
Sbjct: 4473585 gctgttgaggatgttgttgttgacg 4473609
to top
>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195335

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   tggaacttgaggctggtgag 199
             ||||||||||||||||||||
Sbjct: 62923 tggaacttgaggctggtgag 62904
to top
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 798

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 759 gttgttgttgacggggtcgg 740
to top
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 789

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 747 gttgttgttgacggggtcgg 728
to top
>emb|CR926467.10| Zebrafish DNA sequence from clone DKEYP-20G2 in linkage group 5,
             complete sequence
          Length = 153796

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    atataaatattacaagcatg 53
             ||||||||||||||||||||
Sbjct: 13541 atataaatattacaagcatg 13560
to top
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding
            protein
          Length = 2261

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  gttgttgttgacggggtcgg 222
            ||||||||||||||||||||
Sbjct: 1771 gttgttgttgacggggtcgg 1752
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>emb|CR450794.8| Zebrafish DNA sequence from clone CH211-259I2 in linkage group 14,
              complete sequence
          Length = 176875

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     atataaatattacaagcatg 53
              ||||||||||||||||||||
Sbjct: 174328 atataaatattacaagcatg 174347
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>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein
          Length = 1664

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  gttgttgttgacggggtcgg 222
            ||||||||||||||||||||
Sbjct: 1208 gttgttgttgacggggtcgg 1189
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>emb|Z35600.1|CEF37A8 Caenorhabditis elegans Cosmid F37A8, complete sequence
          Length = 35081

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   aggacgacgatgctcggatt 171
             ||||||||||||||||||||
Sbjct: 34546 aggacgacgatgctcggatt 34565
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>emb|Z35601.1|CER10E9 Caenorhabditis elegans Cosmid R10E9, complete sequence
          Length = 21120

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 aggacgacgatgctcggatt 171
           ||||||||||||||||||||
Sbjct: 44  aggacgacgatgctcggatt 63
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>emb|BX649366.5| Zebrafish DNA sequence from clone DKEY-16I5 in linkage group 12,
             complete sequence
          Length = 222310

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    gtacaaatttacattttaca 85
             ||||||||||||||||||||
Sbjct: 83705 gtacaaatttacattttaca 83686
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>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase
             IV-1 gene, complete cds
          Length = 15000

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   gttgttgttgacggggtcgg 222
             ||||||||||||||||||||
Sbjct: 13915 gttgttgttgacggggtcgg 13934
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>ref|NM_065396.2| Caenorhabditis elegans R10E9.3 (R10E9.3) mRNA, complete cds
          Length = 528

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 aggacgacgatgctcggatt 171
           ||||||||||||||||||||
Sbjct: 70  aggacgacgatgctcggatt 89
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 203      gttgttgttgacggggtcgg 222
                ||||||||||||||||||||
Sbjct: 10793743 gttgttgttgacggggtcgg 10793724
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 203      gttgttgttgacggggtcgg 222
                ||||||||||||||||||||
Sbjct: 30025096 gttgttgttgacggggtcgg 30025077



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 203      gttgttgttgacggggtcgg 222
                ||||||||||||||||||||
Sbjct: 23604290 gttgttgttgacggggtcgg 23604271
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>gb|AC159138.6| Mus musculus  BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 180124

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    tggaacttgaggctggtgag 199
              ||||||||||||||||||||
Sbjct: 148953 tggaacttgaggctggtgag 148934
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>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0690B02
          Length = 153116

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   gttgttgttgacggggtcgg 222
             ||||||||||||||||||||
Sbjct: 21086 gttgttgttgacggggtcgg 21067
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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   gttgttgttgacggggtcgg 222
             ||||||||||||||||||||
Sbjct: 17466 gttgttgttgacggggtcgg 17447
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>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518F01
          Length = 154541

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   gttgttgttgacggggtcgg 222
             ||||||||||||||||||||
Sbjct: 66989 gttgttgttgacggggtcgg 66970
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>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0085I16
          Length = 141701

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    gttgttgttgacggggtcgg 222
              ||||||||||||||||||||
Sbjct: 130361 gttgttgttgacggggtcgg 130342
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>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor
          Length = 2780

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  gttgttgttgacggggtcgg 222
            ||||||||||||||||||||
Sbjct: 2682 gttgttgttgacggggtcgg 2663
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>emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on chromosome 11, complete
              sequence
          Length = 213263

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    ttgaggctggtgaggatgtt 205
              ||||||||||||||||||||
Sbjct: 192135 ttgaggctggtgaggatgtt 192116
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>emb|AJ507163.1|HEC507163 Hepatitis C virus partial gene for polyprotein, genomic RNA, isolate
            ETR9
          Length = 1341

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gaggctggtgaggatgttgt 207
            ||||||||||||||||||||
Sbjct: 1315 gaggctggtgaggatgttgt 1334
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>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full
           insert sequence
          Length = 1180

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 818 gttgttgttgacggggtcgg 799
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>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full
           insert sequence
          Length = 1126

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 817 gttgttgttgacggggtcgg 798
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>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein
           LHCP
          Length = 967

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 823 gttgttgttgacggggtcgg 804
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>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein
          Length = 1442

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  gttgttgttgacggggtcgg 222
            ||||||||||||||||||||
Sbjct: 1247 gttgttgttgacggggtcgg 1228
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>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein
          Length = 934

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 780 gttgttgttgacggggtcgg 761
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>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding
           protein
          Length = 869

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 771 gttgttgttgacggggtcgg 752
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>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full
           insert sequence
          Length = 1013

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 811 gttgttgttgacggggtcgg 792
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>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full
           insert sequence
          Length = 1021

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 816 gttgttgttgacggggtcgg 797
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>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full
           insert sequence
          Length = 1056

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 818 gttgttgttgacggggtcgg 799
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>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full
           insert sequence
          Length = 1055

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 840 gttgttgttgacggggtcgg 821
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>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full
           insert sequence
          Length = 1055

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 840 gttgttgttgacggggtcgg 821
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>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full
           insert sequence
          Length = 1057

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 842 gttgttgttgacggggtcgg 823
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>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full
           insert sequence
          Length = 650

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 347 gttgttgttgacggggtcgg 328
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>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full
           insert sequence
          Length = 1235

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 816 gttgttgttgacggggtcgg 797
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>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full
           insert sequence
          Length = 1040

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 825 gttgttgttgacggggtcgg 806
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>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full
           insert sequence
          Length = 1045

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 816 gttgttgttgacggggtcgg 797
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>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full
           insert sequence
          Length = 1057

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 842 gttgttgttgacggggtcgg 823
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>gb|AY109324.1| Zea mays CL187_1 mRNA sequence
          Length = 2262

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  gttgttgttgacggggtcgg 222
            ||||||||||||||||||||
Sbjct: 1771 gttgttgttgacggggtcgg 1752
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>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA,
           complete cds
          Length = 1022

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 801 gttgttgttgacggggtcgg 782
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>gb|U43707.1|PAU43707 Picea abies chlorophyll a/b binding protein of PS II mRNA, partial
           cds
          Length = 551

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 357 gttgttgttgacggggtcgg 338
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>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding
           protein mRNA, complete cds
          Length = 997

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 832 gttgttgttgacggggtcgg 813
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>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds
          Length = 1633

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  gttgttgttgacggggtcgg 222
            ||||||||||||||||||||
Sbjct: 1156 gttgttgttgacggggtcgg 1137
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>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I
           light-harvesting chlorophyll a/b binding protein of
           photosystem II (LHCPII), complete cds
          Length = 1022

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 gttgttgttgacggggtcgg 222
           ||||||||||||||||||||
Sbjct: 797 gttgttgttgacggggtcgg 778


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,434,707
Number of Sequences: 3902068
Number of extensions: 2434707
Number of successful extensions: 49084
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48841
Number of HSP's gapped (non-prelim): 243
length of query: 228
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 206
effective length of database: 17,147,199,772
effective search space: 3532323153032
effective search space used: 3532323153032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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