ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet71d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ139266.1| Triticum aestivum gamma tocopherol methyltransfer... 321 7e-85
2gb|BT009496.1| Triticum aestivum clone wr1.pk0077.f1:fis, full i... 303 2e-79
3ref|XM_467331.1| Oryza sativa (japonica cultivar-group), mRNA 100 5e-18
4ref|XM_506924.1| PREDICTED Oryza sativa (japonica cultivar-group... 100 5e-18
5gb|DQ456878.1| Oryza sativa gamma-tocopherol methyltransferase (... 100 5e-18
6dbj|AK071763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 5e-18
7dbj|AK061746.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 5e-18
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 96 7e-17
9dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic D... 96 7e-17
10gb|DQ456879.1| Zea mays gamma-tocopherol methyltransferase (TMT)... 86 7e-14
11gb|AY109799.1| Zea mays CL364_1 mRNA sequence 78 2e-11
12gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725... 54 2e-04
13gb|DQ456880.1| Gossypium hirsutum gamma-tocopherol methyltransfe... 54 2e-04
14gb|AF213481.1|AF213481 Perilla frutescens gamma-tocopherol methy... 52 0.001
15emb|AJ422213.1|BDI422213 Babesia divergens mRNA for ran binding-... 44 0.24
16ref|XM_472495.1| Oryza sativa (japonica cultivar-group), predic... 42 0.95
17emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 0.95
18gb|DQ456877.1| Solanum tuberosum gamma-tocopherol methyltransfer... 42 0.95
19gb|DQ456876.1| Lycopersicon esculentum gamma-tocopherol methyltr... 42 0.95
20gb|AC006955.6| Arabidopsis thaliana chromosome 2 clone F28I8 map... 42 0.95
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.95
22dbj|AK070730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.95
23gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, comp... 40 3.8
24gb|AC002124.2| Homo sapiens BAC clone CTB-180O1 from 7, complete... 40 3.8
25gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, comp... 40 3.8
26emb|AL589685.17| Human DNA sequence from clone RP11-443G18 on ch... 40 3.8
27gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome... 40 3.8
28gb|AC096540.2| Homo sapiens chromosome 1 clone RP11-223A3, compl... 40 3.8
29gb|AC135895.2| Homo sapiens 12 BAC RP11-168J19 (Roswell Park Can... 40 3.8
30emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on ch... 40 3.8
31dbj|AP004545.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 3.8 
>gb|DQ139266.1| Triticum aestivum gamma tocopherol methyltransferase mRNA, complete
            cds
          Length = 1288

 Score =  321 bits (162), Expect = 7e-85
 Identities = 259/289 (89%), Gaps = 3/289 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaatctgaaaagaattttgctttaaaaaccacttttcatatggcacttgcagttgcaggt 60
            ||||||||  ||||||||||||||  ||||| || ||||||||||||| ||||||||| |
Sbjct: 1265 gaatctgaggagaattttgctttaggaacca-ttctcatatggcacttccagttgcagat 1207

                                                                        
Query: 61   acataggcatggtaacacgaaaattttcagctacaaggcggcagcacgctgagtgtacct 120
            ||| ||||| |||||||||||| | ||||||||||||||| ||||| || |||| ||   
Sbjct: 1206 acagaggcacggtaacacgaaattattcagctacaaggcgacagcaagccgagtctattc 1147

                                                                        
Query: 121  caatcacatgggttctattctacacta--ggcgatgcggtctcagcttctccttctgtga 178
            ||||||||||||||||||||||||||   |||||||||| ||||| |||||||||| || 
Sbjct: 1146 caatcacatgggttctattctacactctgggcgatgcggcctcaggttctccttctatgg 1087

                                                                        
Query: 179  ctgcttggggtttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagcctt 238
            |||||||||||||| |||||||||||||| ||||||| || |||||||||||||||||||
Sbjct: 1086 ctgcttggggtttgtggcaggtgatgatgctgaacttaatgaggcctttcttgtagcctt 1027

                                                             
Query: 239  ggatcatgagaggcatcaccagtgctccctttatcgtcttccatccact 287
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 ggatcatgagaggcatcaccagtgctccctttatcgtcttccatccact 978
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>gb|BT009496.1| Triticum aestivum clone wr1.pk0077.f1:fis, full insert mRNA sequence
          Length = 1024

 Score =  303 bits (153), Expect = 2e-79
 Identities = 244/273 (89%), Gaps = 1/273 (0%)
 Strand = Plus / Minus

                                                                        
Query: 15   ttttgctttaaaaaccacttttcatatggcacttgcagttgcaggtacataggcatggta 74
            ||||||||||  ||||||||| | |||| ||||| ||||||||| || | ||||| ||||
Sbjct: 1004 ttttgctttaggaaccactttcc-tatgccacttccagttgcagatagagaggcacggta 946

                                                                        
Query: 75   acacgaaaattttcagctacaaggcggcagcacgctgagtgtacctcaatcacatgggtt 134
            |||| ||| | ||||||||| ||||| ||||| || |||| ||   ||||||||||||||
Sbjct: 945  acacaaaattattcagctacgaggcgacagcaagccgagtctattccaatcacatgggtt 886

                                                                        
Query: 135  ctattctacactaggcgatgcggtctcagcttctccttctgtgactgcttggggtttgcg 194
            |||||||||||| |||||||||| ||||| |||||||||| || ||||||||||||||||
Sbjct: 885  ctattctacactgggcgatgcggcctcaggttctccttctatggctgcttggggtttgcg 826

                                                                        
Query: 195  gcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgagaggcat 254
            ||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 825  gcaggtgatgatgctgaacttaatgaggcctttcttgtagccttggatcatgagaggcat 766

                                             
Query: 255  caccagtgctccctttatcgtcttccatccact 287
            |||||||||||||||||||||||||||||||||
Sbjct: 765  caccagtgctccctttatcgtcttccatccact 733
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>ref|XM_467331.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1301

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 249
            ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 1090 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 1031

                                                  
Query: 250  ggcatcaccagtgctccctttatcgtcttccatccact 287
            |||||||||| ||| ||  ||||||||||||| |||||
Sbjct: 1030 ggcatcaccattgcacctcttatcgtcttccacccact 993
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>ref|XM_506924.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1111_E07.25 mRNA
          Length = 1432

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 249
            ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 1091 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 1032

                                                  
Query: 250  ggcatcaccagtgctccctttatcgtcttccatccact 287
            |||||||||| ||| ||  ||||||||||||| |||||
Sbjct: 1031 ggcatcaccattgcacctcttatcgtcttccacccact 994
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>gb|DQ456878.1| Oryza sativa gamma-tocopherol methyltransferase (TMT) mRNA, complete
            cds
          Length = 1432

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 249
            ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 1091 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 1032

                                                  
Query: 250  ggcatcaccagtgctccctttatcgtcttccatccact 287
            |||||||||| ||| ||  ||||||||||||| |||||
Sbjct: 1031 ggcatcaccattgcacctcttatcgtcttccacccact 994
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>dbj|AK071763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110C23, full
            insert sequence
          Length = 1432

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 249
            ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 1091 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 1032

                                                  
Query: 250  ggcatcaccagtgctccctttatcgtcttccatccact 287
            |||||||||| ||| ||  ||||||||||||| |||||
Sbjct: 1031 ggcatcaccattgcacctcttatcgtcttccacccact 994
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>dbj|AK061746.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F12, full
            insert sequence
          Length = 1301

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 249
            ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 1090 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 1031

                                                  
Query: 250  ggcatcaccagtgctccctttatcgtcttccatccact 287
            |||||||||| ||| ||  ||||||||||||| |||||
Sbjct: 1030 ggcatcaccattgcacctcttatcgtcttccacccact 993
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                            
Query: 190      ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 249
                ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 28915700 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 28915641

                                                
Query: 250      ggcatcaccagtgctccctttatcgtcttcca 281
                |||||||||| ||| ||  |||||||||||||
Sbjct: 28915640 ggcatcaccattgcacctcttatcgtcttcca 28915609
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>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1111_E07
          Length = 123613

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                          
Query: 190    ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 249
              ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 108392 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 108333

                                              
Query: 250    ggcatcaccagtgctccctttatcgtcttcca 281
              |||||||||| ||| ||  |||||||||||||
Sbjct: 108332 ggcatcaccattgcacctcttatcgtcttcca 108301
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>gb|DQ456879.1| Zea mays gamma-tocopherol methyltransferase (TMT) mRNA, complete cds
          Length = 1310

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 249
            ||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||||||| || 
Sbjct: 1112 ttgcgacaggtgatgatggtgaatttgatgaggcccttcttgtagccctggatcattagc 1053

                                               
Query: 250  ggcatcaccagtgctccctttatcgtcttccatcc 284
            ||||||||||  || ||  | ||||||||||||||
Sbjct: 1052 ggcatcaccatcgcgcctctgatcgtcttccatcc 1018
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>gb|AY109799.1| Zea mays CL364_1 mRNA sequence
          Length = 1304

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 249
            ||||| ||||||||||||||||| ||||| || || ||||||||||| |||||||| || 
Sbjct: 1094 ttgcgacaggtgatgatggtgaatttgatgagccccttcttgtagccctggatcattagc 1035

                                               
Query: 250  ggcatcaccagtgctccctttatcgtcttccatcc 284
            ||||||||||  || ||  | ||||||||||||||
Sbjct: 1034 ggcatcaccatcgcgcctctgatcgtcttccatcc 1000
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>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region
          Length = 108553

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 190   ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatca 244
             ||||||||||||||||  ||||| ||||| || || ||| |||||||||||||||
Sbjct: 92837 ttgcggcaggtgatgactgtgaatttgatgagccccttcctgtagccttggatca 92891
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>gb|DQ456880.1| Gossypium hirsutum gamma-tocopherol methyltransferase (TMT) mRNA,
            complete cds
          Length = 1384

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                        
Query: 186  gggtttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcat 245
            |||||| ||||| |||||||| | |||||| ||||  ||||||| ||| |||||||||||
Sbjct: 1154 gggtttccggcatgtgatgatagcgaactttatcacccctttctggtacccttggatcat 1095

                                       
Query: 246  gagaggcatcaccagtgctccctttat 272
             |  |||||||| ||||| || |||||
Sbjct: 1094 caatggcatcactagtgcaccttttat 1068
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>gb|AF213481.1|AF213481 Perilla frutescens gamma-tocopherol methyltransferase (TMT) mRNA,
            complete cds
          Length = 1369

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 187  ggtttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatg 246
            ||||| ||||| || |||||||  || ||||||| ||| ||||| || |||| |||||| 
Sbjct: 1188 ggttttcggcatgtaatgatggcaaatttgatcacgcccttcttatatccttcgatcatc 1129

                                                  
Query: 247  agaggcatcaccagtgctccctttatcgtcttccatcc 284
            |  |||||||||| ||||||  |||| |||||||||||
Sbjct: 1128 aatggcatcaccattgctcctcttatagtcttccatcc 1091
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>emb|AJ422213.1|BDI422213 Babesia divergens mRNA for ran binding-like protein 1
          Length = 1038

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 14  attttgctttaaaaaccacttt 35
           ||||||||||||||||||||||
Sbjct: 130 attttgctttaaaaaccacttt 109
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>ref|XM_472495.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1617

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 39  tatggcacttgcagttgcagg 59
           |||||||||||||||||||||
Sbjct: 928 tatggcacttgcagttgcagg 948
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>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
             complete sequence
          Length = 163738

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    tatggcacttgcagttgcagg 59
             |||||||||||||||||||||
Sbjct: 88777 tatggcacttgcagttgcagg 88797
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>gb|DQ456877.1| Solanum tuberosum gamma-tocopherol methyltransferase (TMT) mRNA,
            complete cds
          Length = 1396

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 199  gtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgagaggcatcacc 258
            ||||||||||  || ||||| || ||||||||||| ||||  ||||| || |||||  ||
Sbjct: 1191 gtgatgatggcaaatttgatgagacctttcttgtatccttcaatcatcagtggcattgcc 1132

                                         
Query: 259  agtgctccctttatcgtcttccatccact 287
            |||||  | || || ||||||||||||||
Sbjct: 1131 agtgcagctttgattgtcttccatccact 1103
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>gb|DQ456876.1| Lycopersicon esculentum gamma-tocopherol methyltransferase (TMT)
            mRNA, complete cds
          Length = 1354

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 199  gtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgagaggcatcacc 258
            ||||||||||  || ||||| || ||||||||||| ||||  ||||| || |||||  ||
Sbjct: 1087 gtgatgatggcaaatttgatgagacctttcttgtatccttcaatcatcagtggcattgcc 1028

                                         
Query: 259  agtgctccctttatcgtcttccatccact 287
            |||||  | || || ||||||||||||||
Sbjct: 1027 agtgcagctttgattgtcttccatccact 999
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>gb|AC006955.6| Arabidopsis thaliana chromosome 2 clone F28I8 map RNS1, complete
             sequence
          Length = 116217

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     aaaagaattttgctttaaaaa 28
             |||||||||||||||||||||
Sbjct: 86388 aaaagaattttgctttaaaaa 86408
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 39       tatggcacttgcagttgcagg 59
                |||||||||||||||||||||
Sbjct: 21275303 tatggcacttgcagttgcagg 21275323
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>dbj|AK070730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063K10, full
            insert sequence
          Length = 2705

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 39   tatggcacttgcagttgcagg 59
            |||||||||||||||||||||
Sbjct: 1733 tatggcacttgcagttgcagg 1753
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>gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, complete sequence
          Length = 170233

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    gtctcagcttctccttctgt 176
              ||||||||||||||||||||
Sbjct: 134081 gtctcagcttctccttctgt 134062
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>gb|AC002124.2| Homo sapiens BAC clone CTB-180O1 from 7, complete sequence
          Length = 100923

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gtctcagcttctccttctgt 176
             ||||||||||||||||||||
Sbjct: 47328 gtctcagcttctccttctgt 47347
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>gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, complete sequence
          Length = 188373

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gtctcagcttctccttctgt 176
           ||||||||||||||||||||
Sbjct: 877 gtctcagcttctccttctgt 896
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>emb|AL589685.17| Human DNA sequence from clone RP11-443G18 on chromosome 1 Contains the
             5' end of the gene for Est1p-like protein B (EST1B), novel
             gene (MGC13102), novel gene (MGC31963), a von
             Hippel-Lindau syndrome (VHL) pseudogene, the CCT3 gene for
             chaperonin containing TCP1 subunit 3 (gamma), the gene for
             SSTK-interacting protein (SSTK-IP) and the 5' end of the
             RHBG gene for Rhesus blood group B glycoprotein, complete
             sequence
          Length = 107819

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   ctcagcttctccttctgtga 178
             ||||||||||||||||||||
Sbjct: 96268 ctcagcttctccttctgtga 96249
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>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence
          Length = 193176

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   gcaggtgatgatggtgaact 214
             ||||||||||||||||||||
Sbjct: 38820 gcaggtgatgatggtgaact 38839
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>gb|AC096540.2| Homo sapiens chromosome 1 clone RP11-223A3, complete sequence
          Length = 168357

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tttaaaaaccacttttcata 40
             ||||||||||||||||||||
Sbjct: 28745 tttaaaaaccacttttcata 28764
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>gb|AC135895.2| Homo sapiens 12 BAC RP11-168J19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 102539

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     aaagaattttgctttaaaaa 28
             ||||||||||||||||||||
Sbjct: 69239 aaagaattttgctttaaaaa 69258
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>emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on chromosome 13, complete
             sequence
          Length = 226457

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   gcaggtgatgatggtgaact 214
             ||||||||||||||||||||
Sbjct: 16247 gcaggtgatgatggtgaact 16228
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>dbj|AP004545.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26E16, TM0103,
             complete sequence
          Length = 100595

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     tgaaaagaattttgctttaa 25
             ||||||||||||||||||||
Sbjct: 42103 tgaaaagaattttgctttaa 42084


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,925,088
Number of Sequences: 3902068
Number of extensions: 2925088
Number of successful extensions: 61191
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61107
Number of HSP's gapped (non-prelim): 80
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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