| Clone Name | rbaet71c03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 ttttgggggaaattaccca 46 ||||||||||||||||||| Sbjct: 28061483 ttttgggggaaattaccca 28061501
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 ttttgggggaaattaccca 46 ||||||||||||||||||| Sbjct: 44779 ttttgggggaaattaccca 44797
>gb|AC004613.1| Homo sapiens PAC clone RP4-651K2 from 7, complete sequence Length = 121166 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gggaattccaaatgaaat 18 |||||||||||||||||| Sbjct: 3844 gggaattccaaatgaaat 3827
>ref|XM_661671.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.50030) partial mRNA Length = 1488 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gggaattccaaatgaaat 18 |||||||||||||||||| Sbjct: 1032 gggaattccaaatgaaat 1049
>emb|AL766847.1|SAG766847 Streptococcus agalactiae NEM316 complete genome, segment 5 Length = 167050 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 28 ttttgggggaaattaccc 45 |||||||||||||||||| Sbjct: 97121 ttttgggggaaattaccc 97138
>ref|XM_626265.1| Cryptosporidium parvum Iowa II putative phosphate/phosphoenolpyruvate translocator with 9 transmembrane domains (cgd5_3410), partial mRNA Length = 1488 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gggaattccaaatgaaat 18 |||||||||||||||||| Sbjct: 1032 gggaattccaaatgaaat 1049
>gb|AC124172.4| Mus musculus BAC clone RP23-168P24 from chromosome 1, complete sequence Length = 192946 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 ggaattccaaatgaaatt 19 |||||||||||||||||| Sbjct: 132235 ggaattccaaatgaaatt 132218
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 ttgggggaaattacccaa 47 |||||||||||||||||| Sbjct: 2018744 ttgggggaaattacccaa 2018761
>gb|AC172370.2| Gallus gallus BAC clone CH261-119J18 from chromosome ul, complete sequence Length = 260878 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 gaattccaaatgaaattc 20 |||||||||||||||||| Sbjct: 240981 gaattccaaatgaaattc 240998
>emb|AL672033.12| Mouse DNA sequence from clone RP23-436F2 on chromosome X, complete sequence Length = 181933 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gggaattccaaatgaaat 18 |||||||||||||||||| Sbjct: 166915 gggaattccaaatgaaat 166898 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 363,647 Number of Sequences: 3902068 Number of extensions: 363647 Number of successful extensions: 117906 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117799 Number of HSP's gapped (non-prelim): 107 length of query: 48 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 28 effective length of database: 17,155,003,908 effective search space: 480340109424 effective search space used: 480340109424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)