ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet71b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ000693.1|HVAJ693 Hordeum vulgare mRNA for 4-hydroxyphenylp... 511 e-142
2gb|DQ139267.1| Triticum aestivum 4-hydroxyphenylpyruvate dioxyge... 242 5e-61
3gb|BT009036.1| Triticum aestivum clone wdk4c.pk006.m9:fis, full ... 236 3e-59
4emb|AL139824.22| Human DNA sequence from clone RP11-380D15 on ch... 46 0.054
5gb|AY277796.1| Dasyatis sayi renal urea transporter strUT-2 mRNA... 44 0.21
6gb|AY277795.1| Dasyatis sabina renal urea transporter strUT-2c m... 44 0.21
7gb|AY277794.1| Dasyatis sabina renal urea transporter strUT-2 mR... 44 0.21
8gb|AY277793.1| Dasyatis sabina renal urea transporter strUT-1 mR... 44 0.21
9gb|AF503513.1| Dasyatis sabina urea tranporter 2 (strUT-2a) mRNA... 44 0.21
10gb|AF443781.2| Dasyatis sabina kidney urea transporter 1 (strUT-... 44 0.21
11dbj|AB007644.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 0.85
12gb|AF123487.1|AF123487 Jerry Slough virus polyprotein mRNA, comp... 42 0.85
13gb|U88058.1|JCU88058 Jamestown Canyon virus M segment polyprotei... 42 0.85
14gb|AY351210.1| Paramunida pictura Fo156 16S ribosomal RNA gene, ... 40 3.3
15gb|AY351209.1| Paramunida pictura Fo155 16S ribosomal RNA gene, ... 40 3.3
16gb|AY351208.1| Paramunida pictura Fo177 16S ribosomal RNA gene, ... 40 3.3
17gb|AY351207.1| Paramunida pictura Fo176 16S ribosomal RNA gene, ... 40 3.3
18gb|AY351202.1| Paramunida labis Fo151 16S ribosomal RNA gene, pa... 40 3.3
19gb|AY351201.1| Paramunida labis Fo64 16S ribosomal RNA gene, par... 40 3.3
20emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in l... 40 3.3
21gb|AF474718.1| Pygoscelis adeliae isolate S31 mitochondrial cont... 40 3.3
22gb|AF474661.1| Pygoscelis adeliae isolate D201 mitochondrial con... 40 3.3
23gb|AF474657.1| Pygoscelis adeliae isolate D12 mitochondrial cont... 40 3.3
24gb|AF474654.1| Pygoscelis adeliae isolate Cm67 mitochondrial con... 40 3.3
25gb|AF474545.1| Pygoscelis adeliae isolate D103 mitochondrial con... 40 3.3
26emb|CR774195.4| Zebrafish DNA sequence from clone DKEY-73P2 in l... 40 3.3
27gb|AF474886.1| Pygoscelis adeliae isolate PE10.Bird.481 mitochon... 40 3.3
28gb|AF474875.1| Pygoscelis adeliae isolate PE30.Cro.446 mitochond... 40 3.3
29gb|AF474874.1| Pygoscelis adeliae isolate PE31.Bird.481 mitochon... 40 3.3
30gb|AF474809.1| Pygoscelis adeliae isolate PE132.Cro.523 mitochon... 40 3.3
31gb|AF474808.1| Pygoscelis adeliae isolate PE135.Edmo.1086 mitoch... 40 3.3
32gb|AF474802.1| Pygoscelis adeliae isolate PE151.Inexp.5706 mitoc... 40 3.3
33gb|AF474800.1| Pygoscelis adeliae isolate PE162.Foot.5488 mitoch... 40 3.3
34gb|AC021037.6| Homo sapiens chromosome 10 clone RP11-44D15, comp... 40 3.3
35gb|AC079899.16| Homo sapiens 4 BAC RP11-399C9 (Roswell Park Canc... 40 3.3
36gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Can... 40 3.3
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
38gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 40 3.3
39dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
40dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
41dbj|AK058890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.3
42gb|AC007370.7|AC007370 Homo sapiens, clone 22_A_3, complete sequ... 40 3.3
43emb|AL831746.5| Mouse DNA sequence from clone RP23-67O11 on chro... 40 3.3
44emb|AJ012046.1|AWI012046 Acomys wilsoni partial mitochondrial DN... 40 3.3 
>emb|AJ000693.1|HVAJ693 Hordeum vulgare mRNA for 4-hydroxyphenylpyruvate dioxygenase
          Length = 1565

 Score =  511 bits (258), Expect = e-142
 Identities = 258/258 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    agaactcaaaatctgttctttattttacttgcaagcaagattgtacaacaatgtcaacgc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1546 agaactcaaaatctgttctttattttacttgcaagcaagattgtacaacaatgtcaacgc 1487

                                                                        
Query: 61   tacattttcttcatgtgtgagcccctctaccatccattacacccatcatacataggatac 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1486 tacattttcttcatgtgtgagcccctctaccatccattacacccatcatacataggatac 1427

                                                                        
Query: 121  atctgtcttcagcttcaccaattataacattgatataattgtgcgacgcatattacaaac 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1426 atctgtcttcagcttcaccaattataacattgatataattgtgcgacgcatattacaaac 1367

                                                                        
Query: 181  aacattgttttcttttgctccatgagaccatgatacaaggaccagcttctatcctatgat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1366 aacattgttttcttttgctccatgagaccatgatacaaggaccagcttctatcctatgat 1307

                              
Query: 241  ccctgaactgcagcagat 258
            ||||||||||||||||||
Sbjct: 1306 ccctgaactgcagcagat 1289
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>gb|DQ139267.1| Triticum aestivum 4-hydroxyphenylpyruvate dioxygenase mRNA, complete
            cds
          Length = 1588

 Score =  242 bits (122), Expect = 5e-61
 Identities = 190/208 (91%), Gaps = 6/208 (2%)
 Strand = Plus / Minus

                                                                        
Query: 16   ttctttattttacttgcaagcaagattgtacaacaatgtcaacgctacattttcttcatg 75
            |||||||||||||||||||||||||||||||||||||| ||||  |||||||| ||||||
Sbjct: 1572 ttctttattttacttgcaagcaagattgtacaacaatgccaacagtacattttgttcatg 1513

                                                                        
Query: 76   tgtgag-cccctctaccatccattacacccatca---tacataggatacatctgtcttca 131
            |||||| ||||||||||||| |||||||||||||   |||||||||||||||||||||||
Sbjct: 1512 tgtgagccccctctaccatctattacacccatcatactacataggatacatctgtcttca 1453

                                                                        
Query: 132  gcttcaccaattataacat-tgatataattgtgcgacgcatattacaaacaacattgttt 190
            |||||| ||| |||||||| ||||| ||||| ||| ||||| ||||||||||||| ||||
Sbjct: 1452 gcttcatcaa-tataacatctgatacaattgcgcgccgcatcttacaaacaacatagttt 1394

                                        
Query: 191  tcttttgctccatgagaccatgatacaa 218
            |||||||||||| |||||||||||||||
Sbjct: 1393 tcttttgctccaggagaccatgatacaa 1366



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                 
Query: 222  ccagcttctatcctatgatccctgaactgcagcagat 258
            |||||||||||||||||||||||||||||||||||||
Sbjct: 1341 ccagcttctatcctatgatccctgaactgcagcagat 1305
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>gb|BT009036.1| Triticum aestivum clone wdk4c.pk006.m9:fis, full insert mRNA sequence
          Length = 1614

 Score =  236 bits (119), Expect = 3e-59
 Identities = 203/228 (89%), Gaps = 11/228 (4%)
 Strand = Plus / Minus

                                                                        
Query: 1    agaactcaaaatc---tgttctttattttacttgcaagcaagattgtacaacaatgtcaa 57
            |||||||||||||   | ||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 1591 agaactcaaaatcggttcttctttattttacttgcaagcaagattatacaacaatgccaa 1532

                                                                        
Query: 58   cgctacattttcttcatgtgtgag------cccctctaccatccattacacccatcatac 111
            |  |||||||| ||||||||||||      ||||||||||||| ||||||||||||||||
Sbjct: 1531 cagtacattttgttcatgtgtgagccgagccccctctaccatctattacacccatcatac 1472

                                                                        
Query: 112  ataggatacatctgtcttcagcttcaccaattataacat-tgatataattgtgcgacgca 170
            |||||||||||||||||||||||||||||||||||||||  || ||||||| ||| ||||
Sbjct: 1471 ataggatacatctgtcttcagcttcaccaattataacatcggacataattgcgcgccgca 1412

                                                            
Query: 171  tattacaaacaacattgttttcttttgctccatgagaccatgatacaa 218
            | |||||||||||||  |||||||||||||||||||||| ||||||||
Sbjct: 1411 tcttacaaacaacatcattttcttttgctccatgagacc-tgatacaa 1365



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                 
Query: 222  ccagcttctatcctatgatccctgaactgcagcagat 258
            |||||||||||||||||||||||||||||||||||||
Sbjct: 1340 ccagcttctatcctatgatccctgaactgcagcagat 1304
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>emb|AL139824.22| Human DNA sequence from clone RP11-380D15 on chromosome 20 Contains the
             MC3R gene for melanocortin 3 receptor, a zinc finger
             pseudogene and a novel gene, complete sequence
          Length = 193144

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 21    tattttacttgcaagcaagattg 43
             |||||||||||||||||||||||
Sbjct: 40029 tattttacttgcaagcaagattg 40051
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>gb|AY277796.1| Dasyatis sayi renal urea transporter strUT-2 mRNA, complete cds
          Length = 1683

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 184 attgttttcttttgctccatga 205
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
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>gb|AY277795.1| Dasyatis sabina renal urea transporter strUT-2c mRNA, complete cds,
           alternatively spliced
          Length = 5179

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 184 attgttttcttttgctccatga 205
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
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>gb|AY277794.1| Dasyatis sabina renal urea transporter strUT-2 mRNA, complete cds,
           alternatively spliced
          Length = 3850

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 184 attgttttcttttgctccatga 205
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
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>gb|AY277793.1| Dasyatis sabina renal urea transporter strUT-1 mRNA, complete cds,
           alternatively spliced
          Length = 1509

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 184 attgttttcttttgctccatga 205
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
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>gb|AF503513.1| Dasyatis sabina urea tranporter 2 (strUT-2a) mRNA, complete cds
          Length = 3642

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 184 attgttttcttttgctccatga 205
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
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>gb|AF443781.2| Dasyatis sabina kidney urea transporter 1 (strUT-1b) mRNA, complete
           cds
          Length = 2660

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 184 attgttttcttttgctccatga 205
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
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>dbj|AB007644.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19P17
          Length = 73840

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 173   ttacaaacaacattgttttcttttg 197
             ||||||| |||||||||||||||||
Sbjct: 31483 ttacaaataacattgttttcttttg 31459
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>gb|AF123487.1|AF123487 Jerry Slough virus polyprotein mRNA, complete cds
          Length = 4510

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 aaggaccagcttctatcctat 237
           |||||||||||||||||||||
Sbjct: 972 aaggaccagcttctatcctat 992
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>gb|U88058.1|JCU88058 Jamestown Canyon virus M segment polyprotein gene, complete cds
          Length = 4510

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 aaggaccagcttctatcctat 237
           |||||||||||||||||||||
Sbjct: 972 aaggaccagcttctatcctat 992
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>gb|AY351210.1| Paramunida pictura Fo156 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 tattacaaacaacattgttttctt 194
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
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>gb|AY351209.1| Paramunida pictura Fo155 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 tattacaaacaacattgttttctt 194
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
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>gb|AY351208.1| Paramunida pictura Fo177 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 tattacaaacaacattgttttctt 194
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
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>gb|AY351207.1| Paramunida pictura Fo176 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 tattacaaacaacattgttttctt 194
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
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>gb|AY351202.1| Paramunida labis Fo151 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 518

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 173 ttacaaacaacattgttttctttt 196
           ||||||||||| ||||||||||||
Sbjct: 345 ttacaaacaactttgttttctttt 322
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>gb|AY351201.1| Paramunida labis Fo64 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 518

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 173 ttacaaacaacattgttttctttt 196
           ||||||||||| ||||||||||||
Sbjct: 345 ttacaaacaactttgttttctttt 322
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>emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in linkage group 3, complete
              sequence
          Length = 168285

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      caaaatctgttctttatttt 26
              ||||||||||||||||||||
Sbjct: 109831 caaaatctgttctttatttt 109812
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>gb|AF474718.1| Pygoscelis adeliae isolate S31 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474661.1| Pygoscelis adeliae isolate D201 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474657.1| Pygoscelis adeliae isolate D12 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474654.1| Pygoscelis adeliae isolate Cm67 mitochondrial control region,
           partial sequence
          Length = 328

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474545.1| Pygoscelis adeliae isolate D103 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>emb|CR774195.4| Zebrafish DNA sequence from clone DKEY-73P2 in linkage group 3,
             complete sequence
          Length = 161050

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   tacaaacaacattgttttct 193
             ||||||||||||||||||||
Sbjct: 48564 tacaaacaacattgttttct 48545
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>gb|AF474886.1| Pygoscelis adeliae isolate PE10.Bird.481 mitochondrial control
           region, partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474875.1| Pygoscelis adeliae isolate PE30.Cro.446 mitochondrial control
           region, partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474874.1| Pygoscelis adeliae isolate PE31.Bird.481 mitochondrial control
           region, partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474809.1| Pygoscelis adeliae isolate PE132.Cro.523 mitochondrial control
           region, partial sequence
          Length = 331

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474808.1| Pygoscelis adeliae isolate PE135.Edmo.1086 mitochondrial control
           region, partial sequence
          Length = 330

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474802.1| Pygoscelis adeliae isolate PE151.Inexp.5706 mitochondrial control
           region, partial sequence
          Length = 316

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474800.1| Pygoscelis adeliae isolate PE162.Foot.5488 mitochondrial control
           region, partial sequence
          Length = 326

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 208 ccatgatacaaggaccagcttcta 231
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AC021037.6| Homo sapiens chromosome 10 clone RP11-44D15, complete sequence
          Length = 179918

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    ttataacattgatataattg 161
              ||||||||||||||||||||
Sbjct: 101809 ttataacattgatataattg 101828
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>gb|AC079899.16| Homo sapiens 4 BAC RP11-399C9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166679

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     attttacttgcaagcaagat 41
              ||||||||||||||||||||
Sbjct: 137897 attttacttgcaagcaagat 137878
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>gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188205

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   aattataacattgatataat 159
             ||||||||||||||||||||
Sbjct: 44693 aattataacattgatataat 44674
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 20      ttattttacttgcaagcaagattgtaca 47
               |||||||| || ||||||||||||||||
Sbjct: 3677545 ttattttatttccaagcaagattgtaca 3677572



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 20      ttattttacttgcaagcaagattgtaca 47
               |||||||| || ||||||||||||||||
Sbjct: 3677472 ttattttatttccaagcaagattgtaca 3677499
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 175    acaaacaacattgttttcttttgc 198
              ||||| ||||||||||||||||||
Sbjct: 821905 acaaataacattgttttcttttgc 821882
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>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0669G09
          Length = 140067

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 20    ttattttacttgcaagcaagattgtaca 47
             |||||||| || ||||||||||||||||
Sbjct: 17862 ttattttatttccaagcaagattgtaca 17889



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 20    ttattttacttgcaagcaagattgtaca 47
             |||||||| || ||||||||||||||||
Sbjct: 17789 ttattttatttccaagcaagattgtaca 17816
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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0085K21
          Length = 180714

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 20     ttattttacttgcaagcaagattgtaca 47
              |||||||| || ||||||||||||||||
Sbjct: 158835 ttattttatttccaagcaagattgtaca 158862



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 20     ttattttacttgcaagcaagattgtaca 47
              |||||||| || ||||||||||||||||
Sbjct: 158762 ttattttatttccaagcaagattgtaca 158789
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>dbj|AK058890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D10, full
           insert sequence
          Length = 985

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 20  ttattttacttgcaagcaagattgtaca 47
           |||||||| || ||||||||||||||||
Sbjct: 962 ttattttatttccaagcaagattgtaca 935
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>gb|AC007370.7|AC007370 Homo sapiens, clone 22_A_3, complete sequence
          Length = 176426

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    attttacttgcaagcaagat 41
             ||||||||||||||||||||
Sbjct: 72003 attttacttgcaagcaagat 71984
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>emb|AL831746.5| Mouse DNA sequence from clone RP23-67O11 on chromosome 4, complete
              sequence
          Length = 239570

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    ttgttttcttttgctccatg 204
              ||||||||||||||||||||
Sbjct: 118645 ttgttttcttttgctccatg 118626
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>emb|AJ012046.1|AWI012046 Acomys wilsoni partial mitochondrial DNA for D-loop, specimen
           voucher Schlitter D. A., CM 98234
          Length = 356

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 141 attataacattgatataatt 160
           ||||||||||||||||||||
Sbjct: 100 attataacattgatataatt 81


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,313,256
Number of Sequences: 3902068
Number of extensions: 3313256
Number of successful extensions: 71680
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71586
Number of HSP's gapped (non-prelim): 90
length of query: 258
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 236
effective length of database: 17,147,199,772
effective search space: 4046739146192
effective search space used: 4046739146192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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