ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet70h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transfe... 680 0.0
2dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase,... 307 1e-80
3gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 200 2e-48
4gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome... 200 2e-48
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 200 2e-48
6dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 2e-48
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 200 2e-48
8dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 5e-46
9gb|AY104207.1| Zea mays PCO111099 mRNA sequence 119 6e-24
10gb|AF052194.1|AF052194 Actinidia deliciosa xyloglucan endotransg... 62 1e-06
11gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan ... 52 0.001
12gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase... 46 0.075
13ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TR... 44 0.29
14emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Co... 44 0.29
15emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Co... 44 0.29
16dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan tra... 44 0.29
17dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.29
18gb|AF163822.1|AF163822 Arabidopsis thaliana endoxyloglucan trans... 44 0.29
19dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan endot... 44 0.29
20dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transf... 44 0.29
21dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferas... 44 0.29
22dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxylogl... 44 0.29
23gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hyd... 42 1.2
24emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 42 1.2
25gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.2
26dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan en... 42 1.2
27dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan endot... 42 1.2
28gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase... 42 1.2
29ref|XM_527961.1| PREDICTED: Pan troglodytes similar to Sonic hed... 40 4.6
30ref|XM_362730.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 4.6
31gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosom... 40 4.6
32gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete... 40 4.6
33gb|AY422195.1| Homo sapiens sonic hedgehog homolog (Drosophila) ... 40 4.6
34emb|AJ811689.1| Pyrus communis xet gene for xyloglucan endotrans... 40 4.6
35dbj|AK140479.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 4.6
36gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold 40 4.6
37gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome... 40 4.6
38gb|AC147335.2| Pan troglodytes BAC clone RP43-4C1 from chromosom... 40 4.6
39dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endot... 40 4.6
40gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 4.6
41gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete... 40 4.6
42gb|AC002484.1|AC002484 Human cosmid clone LL157A05 from 7q36, co... 40 4.6 
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase
          Length = 1175

 Score =  680 bits (343), Expect = 0.0
 Identities = 346/347 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    aataaagcacgcatgagcatacagacacgtagggatacaaattcctcgtactagtacatc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 aataaagcacgcatgagcatacagacacgtagggatacaaattcctcgtactagtacatc 1054

                                                                        
Query: 61   tcatcgaccgcaccgcgaccggtggtacaacaacaactactgtagtagcggtcctttaca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 tcatcgaccgcaccgcgaccggtggtacaacaacaactactgtagtagcggtcctttaca 994

                                                                        
Query: 121  tcagtagtagtaagtaaagtatatcacgctcaaacgtcgcggtcgcgtttgcactcgggc 180
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 993  tcagtagtagtaagtaaagtatatcacgctcagacgtcgcggtcgcgtttgcactcgggc 934

                                                                        
Query: 181  gacatggcggcgtatcgttcgcggtctgtgcagtagttgtagatggtgtgctccttcctg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933  gacatggcggcgtatcgttcgcggtctgtgcagtagttgtagatggtgtgctccttcctg 874

                                                                        
Query: 241  acccaggcgaggcggcggtactgcgcggcgtccaggtcctggaactcgggctgatcccac 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873  acccaggcgaggcggcggtactgcgcggcgtccaggtcctggaactcgggctgatcccac 814

                                                           
Query: 301  cagcgggcgccctgggtggcgcacaacttggcctccgccgacgcctc 347
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813  cagcgggcgccctgggtggcgcacaacttggcctccgccgacgcctc 767
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>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds
          Length = 1088

 Score =  307 bits (155), Expect = 1e-80
 Identities = 188/199 (94%)
 Strand = Plus / Minus

                                                                       
Query: 149 ctcaaacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 208
           |||| |||||||||||||| |||||||| |||| |||||||||||| || ||| |||| |
Sbjct: 926 ctcagacgtcgcggtcgcgcttgcactctggcgccatggcggcgtagcggtcgtggtcgg 867

                                                                       
Query: 209 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 807

                                                                       
Query: 269 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 328
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 806 cgtccaggtcctggaactcgggctggtcccaccagcgggcgccctgggtggcgcagaact 747

                              
Query: 329 tggcctccgccgacgcctc 347
           |||||||||| ||||||||
Sbjct: 746 tggcctccgcggacgcctc 728



 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                        
Query: 29   gtagggatacaaattcctcgtactagtacatctcatcgaccgcaccgcgaccggtggtac 88
            ||||||||||||||||||||||||| ||  ||||| |||||||||||||||| | || ||
Sbjct: 1039 gtagggatacaaattcctcgtactactaggtctcagcgaccgcaccgcgaccagcggcac 980

                       
Query: 89   aacaacaacta 99
            |||||||||||
Sbjct: 979  aacaacaacta 969
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17,
              complete sequence
          Length = 148829

 Score =  200 bits (101), Expect = 2e-48
 Identities = 170/193 (88%)
 Strand = Plus / Minus

                                                                          
Query: 155    cgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctgtgcagt 214
              ||||||||||||| | |||||||||||||||||||| ||| |||||||||||   |||||
Sbjct: 115775 cgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgtcgcagt 115716

                                                                          
Query: 215    agttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcggcgtcca 274
              |||||||||||||||||  ||| | ||||||||||||||||||||||||  ||||||| |
Sbjct: 115715 agttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcggcgtcga 115656

                                                                          
Query: 275    ggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaacttggcct 334
              ||||  ||||||| ||||| |||||||| ||||||||||||||||||||  ||  |||||
Sbjct: 115655 ggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtaccgggcct 115596

                           
Query: 335    ccgccgacgcctc 347
              |||||||||||||
Sbjct: 115595 ccgccgacgcctc 115583
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>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007D07, complete sequence
          Length = 133930

 Score =  200 bits (101), Expect = 2e-48
 Identities = 170/193 (88%)
 Strand = Plus / Minus

                                                                         
Query: 155   cgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctgtgcagt 214
             ||||||||||||| | |||||||||||||||||||| ||| |||||||||||   |||||
Sbjct: 15394 cgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgtcgcagt 15335

                                                                         
Query: 215   agttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcggcgtcca 274
             |||||||||||||||||  ||| | ||||||||||||||||||||||||  ||||||| |
Sbjct: 15334 agttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcggcgtcga 15275

                                                                         
Query: 275   ggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaacttggcct 334
             ||||  ||||||| ||||| |||||||| ||||||||||||||||||||  ||  |||||
Sbjct: 15274 ggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtaccgggcct 15215

                          
Query: 335   ccgccgacgcctc 347
             |||||||||||||
Sbjct: 15214 ccgccgacgcctc 15202
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  200 bits (101), Expect = 2e-48
 Identities = 170/193 (88%)
 Strand = Plus / Minus

                                                                            
Query: 155      cgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctgtgcagt 214
                ||||||||||||| | |||||||||||||||||||| ||| |||||||||||   |||||
Sbjct: 19012577 cgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgtcgcagt 19012518

                                                                            
Query: 215      agttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcggcgtcca 274
                |||||||||||||||||  ||| | ||||||||||||||||||||||||  ||||||| |
Sbjct: 19012517 agttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcggcgtcga 19012458

                                                                            
Query: 275      ggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaacttggcct 334
                ||||  ||||||| ||||| |||||||| ||||||||||||||||||||  ||  |||||
Sbjct: 19012457 ggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtaccgggcct 19012398

                             
Query: 335      ccgccgacgcctc 347
                |||||||||||||
Sbjct: 19012397 ccgccgacgcctc 19012385
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>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full
           insert sequence
          Length = 977

 Score =  200 bits (101), Expect = 2e-48
 Identities = 170/193 (88%)
 Strand = Plus / Minus

                                                                       
Query: 155 cgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctgtgcagt 214
           ||||||||||||| | |||||||||||||||||||| ||| |||||||||||   |||||
Sbjct: 910 cgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgtcgcagt 851

                                                                       
Query: 215 agttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcggcgtcca 274
           |||||||||||||||||  ||| | ||||||||||||||||||||||||  ||||||| |
Sbjct: 850 agttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcggcgtcga 791

                                                                       
Query: 275 ggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaacttggcct 334
           ||||  ||||||| ||||| |||||||| ||||||||||||||||||||  ||  |||||
Sbjct: 790 ggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtaccgggcct 731

                        
Query: 335 ccgccgacgcctc 347
           |||||||||||||
Sbjct: 730 ccgccgacgcctc 718
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  200 bits (101), Expect = 2e-48
 Identities = 170/193 (88%)
 Strand = Plus / Minus

                                                                            
Query: 155      cgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctgtgcagt 214
                ||||||||||||| | |||||||||||||||||||| ||| |||||||||||   |||||
Sbjct: 19171226 cgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgtcgcagt 19171167

                                                                            
Query: 215      agttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcggcgtcca 274
                |||||||||||||||||  ||| | ||||||||||||||||||||||||  ||||||| |
Sbjct: 19171166 agttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcggcgtcga 19171107

                                                                            
Query: 275      ggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaacttggcct 334
                ||||  ||||||| ||||| |||||||| ||||||||||||||||||||  ||  |||||
Sbjct: 19171106 ggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtaccgggcct 19171047

                             
Query: 335      ccgccgacgcctc 347
                |||||||||||||
Sbjct: 19171046 ccgccgacgcctc 19171034
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>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full
           insert sequence
          Length = 1053

 Score =  192 bits (97), Expect = 5e-46
 Identities = 169/193 (87%)
 Strand = Plus / Minus

                                                                       
Query: 155 cgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctgtgcagt 214
           ||||||||||||| | |||||||||||||||||||| ||| |||||||||||   |||||
Sbjct: 907 cgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgtcgcagt 848

                                                                       
Query: 215 agttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcggcgtcca 274
           |||||||||||||||||  ||| | ||||||||||||||||||||||||  ||||||| |
Sbjct: 847 agttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcggcgtcga 788

                                                                       
Query: 275 ggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaacttggcct 334
           ||||  ||||||| ||||| |||||||| ||||||||||||||||||||  ||  | |||
Sbjct: 787 ggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtaccggtcct 728

                        
Query: 335 ccgccgacgcctc 347
           |||||||||||||
Sbjct: 727 ccgccgacgcctc 715
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>gb|AY104207.1| Zea mays PCO111099 mRNA sequence
          Length = 1202

 Score =  119 bits (60), Expect = 6e-24
 Identities = 148/174 (85%), Gaps = 5/174 (2%)
 Strand = Plus / Minus

                                                                       
Query: 154 acgtcgcggtcgcgtttgcactcgggcgacatggcggcg---tatcgttcgcggtctgtg 210
           ||||||||||||||   ||||||||||| || |||||||   || || ||||| || |||
Sbjct: 937 acgtcgcggtcgcgggcgcactcgggcggcacggcggcgccgtagcggtcgcgatcggtg 878

                                                                       
Query: 211 cagtagttgtagatggtgt-gctccttcctgacccaggcgaggcggcggtactgcgcggc 269
           ||||||||||||||||||| ||  |  |||||||  ||| ||||||||||||||||||||
Sbjct: 877 cagtagttgtagatggtgtagcggcg-cctgacctcggccaggcggcggtactgcgcggc 819

                                                                 
Query: 270 gtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgca 323
           ||| ||||||  |||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 818 gtcgaggtccctgaactccggctggtcccaccagcgcgcgccctgggtggcgca 765
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>gb|AF052194.1|AF052194 Actinidia deliciosa xyloglucan endotransglycosylase precursor (XET)
           mRNA, partial cds
          Length = 789

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                              
Query: 291 ctgatcccaccagcgggcgccctgggtggcgcacaacttggcctccgccga 341
           |||||||||||||||   ||||||||||||||| |||||||||||| ||||
Sbjct: 720 ctgatcccaccagcgcttgccctgggtggcgcagaacttggcctccaccga 670
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>gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan endotransglycosylase
           precursor (XET) mRNA, complete cds
          Length = 1178

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 310 ccctgggtggcgcacaacttggcctccgccgacgcctc 347
           |||||||||||||| |||||||||||| | ||||||||
Sbjct: 753 ccctgggtggcgcagaacttggcctccacagacgcctc 716



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 gtgcagtagttgtagatggt 227
           ||||||||||||||||||||
Sbjct: 855 gtgcagtagttgtagatggt 836
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>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA,
           complete cds
          Length = 1268

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 202 cggtctgtgcagtagttgtagatggtg 228
           ||||| |||||||||||||||||||||
Sbjct: 890 cggtcagtgcagtagttgtagatggtg 864
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>ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4);
            hydrolase, acting on glycosyl bonds / hydrolase,
            hydrolyzing O-glycosyl compounds AT5G13870 (EXGT-A4)
            mRNA, complete cds
          Length = 1386

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 200  cgcggtctgtgcagtagttgtagatggtgt 229
            ||||||| ||||| ||||||||||||||||
Sbjct: 1229 cgcggtcagtgcaatagttgtagatggtgt 1200
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>emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB90ZE02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1347

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 200  cgcggtctgtgcagtagttgtagatggtgt 229
            ||||||| ||||| ||||||||||||||||
Sbjct: 1229 cgcggtcagtgcaatagttgtagatggtgt 1200
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>emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS55ZF02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1362

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 200  cgcggtctgtgcagtagttgtagatggtgt 229
            ||||||| ||||| ||||||||||||||||
Sbjct: 1220 cgcggtcagtgcaatagttgtagatggtgt 1191
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>dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan transferase, complete
           cds, clone: RAFL23-11-K19
          Length = 1028

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 200 cgcggtctgtgcagtagttgtagatggtgt 229
           ||||||| ||||| ||||||||||||||||
Sbjct: 852 cgcggtcagtgcaatagttgtagatggtgt 823
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>dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC12
          Length = 74613

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 200   cgcggtctgtgcagtagttgtagatggtgt 229
             ||||||| ||||| ||||||||||||||||
Sbjct: 25611 cgcggtcagtgcaatagttgtagatggtgt 25640
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>gb|AF163822.1|AF163822 Arabidopsis thaliana endoxyloglucan transferase (EXGT-A4) gene,
            complete cds
          Length = 2645

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 200  cgcggtctgtgcagtagttgtagatggtgt 229
            ||||||| ||||| ||||||||||||||||
Sbjct: 2377 cgcggtcagtgcaatagttgtagatggtgt 2348
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>dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1913

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 208  gtgcagtagttgtagatggtgt 229
            ||||||||||||||||||||||
Sbjct: 1607 gtgcagtagttgtagatggtgt 1586
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>dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transferase, complete cds
          Length = 1319

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 208 gtgcagtagttgtagatggtgt 229
           ||||||||||||||||||||||
Sbjct: 996 gtgcagtagttgtagatggtgt 975
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>dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferase, partial cds
          Length = 975

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 208 gtgcagtagttgtagatggtgt 229
           ||||||||||||||||||||||
Sbjct: 829 gtgcagtagttgtagatggtgt 808
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>dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxyloglucan transferase,
           complete cds
          Length = 1050

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 200 cgcggtctgtgcagtagttgtagatggtgt 229
           ||||||| ||||| ||||||||||||||||
Sbjct: 872 cgcggtcagtgcaatagttgtagatggtgt 843
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>gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hydrolase precursor
           (XTH1) mRNA, complete cds
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 208 gtgcagtagttgtagatggtg 228
           |||||||||||||||||||||
Sbjct: 809 gtgcagtagttgtagatggtg 789
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 302    agcgggcgccctgggtggcgc 322
              |||||||||||||||||||||
Sbjct: 311269 agcgggcgccctgggtggcgc 311249
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 255     gcggtactgcgcggcgtccaggtcc 279
               ||||| |||||||||||||||||||
Sbjct: 2666683 gcggttctgcgcggcgtccaggtcc 2666707
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>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1181

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 204  gtctgtgcagtagttgtagat 224
            |||||||||||||||||||||
Sbjct: 1065 gtctgtgcagtagttgtagat 1045
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>dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1712

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 208  gtgcagtagttgtagatggtg 228
            |||||||||||||||||||||
Sbjct: 1446 gtgcagtagttgtagatggtg 1426
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>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA,
           complete cds
          Length = 1130

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 208 gtgcagtagttgtagatggtg 228
           |||||||||||||||||||||
Sbjct: 868 gtgcagtagttgtagatggtg 848
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>ref|XM_527961.1| PREDICTED: Pan troglodytes similar to Sonic hedgehog protein
            precursor (SHH) (LOC472586), mRNA
          Length = 3822

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 323  acaacttggcctccgccgac 342
            ||||||||||||||||||||
Sbjct: 1322 acaacttggcctccgccgac 1341
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>ref|XM_362730.1| Magnaporthe grisea 70-15 hypothetical protein (MG08318.4) partial
           mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 258 gtactgcgcggcgtccaggtcctggaactcgg 289
           |||| |||| |||||||||||| |||||||||
Sbjct: 366 gtacagcgccgcgtccaggtccaggaactcgg 335
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>gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosome 5, complete
            sequence
          Length = 194560

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    cacgcatgagcatacagaca 27
            ||||||||||||||||||||
Sbjct: 9765 cacgcatgagcatacagaca 9784
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>gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete sequence
          Length = 154737

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    acaacttggcctccgccgac 342
              ||||||||||||||||||||
Sbjct: 100604 acaacttggcctccgccgac 100585
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>gb|AY422195.1| Homo sapiens sonic hedgehog homolog (Drosophila) (SHH) gene, complete
            cds
          Length = 13414

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 323  acaacttggcctccgccgac 342
            ||||||||||||||||||||
Sbjct: 5477 acaacttggcctccgccgac 5496
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>emb|AJ811689.1| Pyrus communis xet gene for xyloglucan endotransglycosilase, exon 1
          Length = 1007

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 tgcagtagttgtagatggtg 228
           ||||||||||||||||||||
Sbjct: 925 tgcagtagttgtagatggtg 906
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>dbj|AK140479.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930008M23 product:Similar to
           dynein heavy chain at 16F homolog [Homo sapiens], full
           insert sequence
          Length = 4389

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 tgtgctccttcctgacccag 246
           ||||||||||||||||||||
Sbjct: 90  tgtgctccttcctgacccag 71
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>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     tacagacacgtagggataca 39
              ||||||||||||||||||||
Sbjct: 498467 tacagacacgtagggataca 498448
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>gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome 5, complete sequence
          Length = 222180

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     cacgcatgagcatacagaca 27
             ||||||||||||||||||||
Sbjct: 82293 cacgcatgagcatacagaca 82274
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>gb|AC147335.2| Pan troglodytes BAC clone RP43-4C1 from chromosome 7, complete sequence
          Length = 186272

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   acaacttggcctccgccgac 342
             ||||||||||||||||||||
Sbjct: 22172 acaacttggcctccgccgac 22191
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>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase,
           partial cds
          Length = 1292

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 tgcagtagttgtagatggtg 228
           ||||||||||||||||||||
Sbjct: 949 tgcagtagttgtagatggtg 930
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 263     gcgcggcgtccaggtcctgg 282
               ||||||||||||||||||||
Sbjct: 4628592 gcgcggcgtccaggtcctgg 4628573
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>gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete sequence
          Length = 239994

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    tgtgctccttcctgacccag 246
              ||||||||||||||||||||
Sbjct: 195584 tgtgctccttcctgacccag 195565
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>gb|AC002484.1|AC002484 Human cosmid clone LL157A05 from 7q36, complete sequence
          Length = 48469

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   acaacttggcctccgccgac 342
             ||||||||||||||||||||
Sbjct: 14988 acaacttggcctccgccgac 14969


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,648,390
Number of Sequences: 3902068
Number of extensions: 2648390
Number of successful extensions: 40901
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40734
Number of HSP's gapped (non-prelim): 165
length of query: 347
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 325
effective length of database: 17,147,199,772
effective search space: 5572839925900
effective search space used: 5572839925900
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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