| Clone Name | rbaet70f01 |
|---|---|
| Clone Library Name | barley_pub |
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Frame = -3 Query: 440 NQRLVGMVDQFNRLLPGAHFTYINIDGIFSDILRAPGGHGLRVTXXXXXXXXXXXGQVTC 261 N +L+ ++ Q ++ LP + F Y++I I S +L P +G T C Sbjct: 431 NSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTGLLSAGALC 490 Query: 260 LPFQTP-CPNRNEYLFWDAFHPTEAA 186 + CPN + YLFWD HPT+ A Sbjct: 491 KKSTSKICPNTSSYLFWDGVHPTQRA 516
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 41.6 bits (96), Expect = 0.001 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Frame = -3 Query: 440 NQRLVGMVDQFNRLLPGAHFTYINIDGIFSDILRAPGGHGLRVTXXXXXXXXXXXGQVTC 261 N +LV ++ Q ++ LP + Y +I IFS +L +P +G G V C Sbjct: 348 NSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVFC 407 Query: 260 LPFQTP-CPNRNEYLFWDAFHPTEAA 186 N + YLFWD HP++ A Sbjct: 408 KERTLKNMSNASSYLFWDGLHPSQRA 433
>JHD2B_HUMAN (Q7LBC6) JmjC domain-containing histone demethylation protein 2B (EC| 1.14.11.-) (Jumonji domain-containing protein 1B) (Nuclear protein 5qNCA) Length = 1761 Score = 32.7 bits (73), Expect = 0.43 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 250 WNGRQVTCPLFRPTPQQPRLVTLRPWPPG 336 W+G ++ C R QP ++ L+ WPPG Sbjct: 1463 WDGFEIICKRLRSEDGQPMVLKLKDWPPG 1491
>JHD2B_MOUSE (Q6ZPY7) JmjC domain-containing histone demethylation protein 2B (EC| 1.14.11.-) (Jumonji domain-containing protein 1B) Length = 1562 Score = 32.7 bits (73), Expect = 0.43 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 250 WNGRQVTCPLFRPTPQQPRLVTLRPWPPG 336 W+G ++ C R QP ++ L+ WPPG Sbjct: 1264 WDGFEIICKRLRSEDGQPMVLKLKDWPPG 1292
>TNR6B_HUMAN (O95407) Tumor necrosis factor receptor superfamily member 6B| precursor (Decoy receptor for Fas ligand) (Decoy receptor 3) (DcR3) (M68) Length = 300 Score = 30.4 bits (67), Expect = 2.1 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = -3 Query: 245 PCPNRNEYLFWDAFHPTEAANVLVGQRAYAARLASDVH 132 PCP R+ FW+ NVL G+R AR H Sbjct: 72 PCPPRHYTQFWNYLERCRYCNVLCGEREEEARACHATH 109
>LBD13_ARATH (Q9AT61) LOB domain protein 13| Length = 268 Score = 30.0 bits (66), Expect = 2.8 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +1 Query: 286 PTPQQPRLVTLRPWPPGARRMSEKMPSMLM 375 PTP+ PRL++ +P PP +S PSM++ Sbjct: 200 PTPRPPRLLSSQPAPPPTPPVSLPSPSMVV 229
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 28.9 bits (63), Expect = 6.2 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +1 Query: 112 RVLMSTG-CTSEASRAA*ALWPTSTLAASVGWKASQKRYSLRLGQGVWNGRQVTCPL 279 R++ + G + S AA L PT + W A+ ++ S+ L G +NG Q +CP+ Sbjct: 2187 RLMQAMGRAQQQGSGAARTLPPTQ-----LEWTATYEKASMALDVGCFNGDQFSCPV 2238
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 28.5 bits (62), Expect = 8.1 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = -2 Query: 336 AGRPRPEGHQPGLLRRGAEQRAGHLPA--VPDALPQPQRVPLLG 211 AG P P+G + G+ +GAE AG+ A +P L P LLG Sbjct: 767 AGTPGPKGDRGGIGEKGAEGTAGNDGAGGLPGPLGPPGPAGLLG 810 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,205,845 Number of Sequences: 219361 Number of extensions: 830144 Number of successful extensions: 2849 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2763 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2845 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)