>K1043_HUMAN (Q96AY4) TPR repeat-containing protein KIAA1043|
          Length = 1716

 Score = 37.0 bits (84), Expect = 0.021
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -1

Query: 437 GASLQRLGQYREAMSWYYRVLALSKETGEDSGCTE---AYGAIADCCADLGDLEGAARLY 267
           G +   +    EA+ ++ + LA+ ++   +    +   AYG + DC   LGD E A + Y
Sbjct: 76  GITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYY 135

Query: 266 DEYISRLQ 243
           ++Y+S  Q
Sbjct: 136 EQYLSVAQ 143



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -1

Query: 437 GASLQRLGQYREAMSWYYRVLALSKETGEDSGCTEAYGAIADCCADLGDLEGAARLYDEY 258
           G   Q++G+Y  A+ ++   L +++ET   +    AYG +      LG  E A    +++
Sbjct: 239 GGVYQQMGEYDTALQYHQLDLQIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQH 298

Query: 257 IS 252
           +S
Sbjct: 299 LS 300

>K1043_MOUSE (Q80XJ3) TPR repeat-containing protein KIAA1043|
          Length = 1691

 Score = 35.8 bits (81), Expect = 0.047
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -1

Query: 437 GASLQRLGQYREAMSWYYRVLALSKETGEDSGCTE---AYGAIADCCADLGDLEGAARLY 267
           G +   +    +A+ ++ + LA+ ++   +    +   AYG + DC   LGD E A + Y
Sbjct: 76  GITKMNMNVMEDAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYY 135

Query: 266 DEYISRLQ 243
           ++Y+S  Q
Sbjct: 136 EQYLSVAQ 143



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -1

Query: 437 GASLQRLGQYREAMSWYYRVLALSKETGEDSGCTEAYGAIADCCADLGDLEGAARLYDEY 258
           G   Q++G+Y  A+ ++   L +++ET   +    AYG +      LG  E A    +++
Sbjct: 239 GGVYQQMGEYDTALQYHQLDLQIAEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQH 298

Query: 257 IS 252
           +S
Sbjct: 299 LS 300

>CN039_MOUSE (Q9CTN5) Protein C14orf39 homolog|
          Length = 574

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 22/105 (20%)
 Frame = +1

Query: 25  YTSRSREGHLMDSSSASSQVKRQAKSAHF------PPDSKQAI----------------F 138
           YTSRS   +L DSS + S++     + H+      P  S+Q I                F
Sbjct: 467 YTSRSPGLNLFDSSVSDSEISSDQFNEHYSAVNLNPSSSQQGIGNLFGKSEGEDAFTFSF 526

Query: 139 DIKSRATDGLWHDDQ*VGRSRVFAHQERPSAQSRGCSLDMYSSYN 273
              S  T G   DD     S  F+ ++ PS  +   S D  SS N
Sbjct: 527 SSDSSHTFGAGKDD----FSFPFSFEQDPSTMTSSSSKDFSSSQN 567

>TIG_TREDE (Q73M39) Trigger factor (TF)|
          Length = 451

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 10/45 (22%), Positives = 27/45 (60%)
 Frame = +2

Query: 11  HRDLYTRVEVERAT*WTVQVPPAKLKDKQNRLIFRQIASKQSLTS 145
           H D++ +VE+++   +T++VP A + +K  +    ++  + +L +
Sbjct: 115 HYDVFPKVEIKKTEGFTIEVPEASVSEKDIKKELERLQERNALVT 159

>VIT1_CHICK (P87498) Vitellogenin-1 precursor (Vitellogenin I) (Minor|
            vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I)
            (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II)
            (LVII); YGP42]
          Length = 1912

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 31   SRSREGHLMDSSSASSQVKRQAKSAH 108
            S SR  H+ DSSS+SS  +   K+AH
Sbjct: 1381 SSSRRSHMSDSSSSSSSHRHGEKAAH 1406


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,211,426
Number of Sequences: 219361
Number of extensions: 972909
Number of successful extensions: 2565
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2565
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)