| Clone Name | rbaet70e05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550483.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1549 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 315 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 374 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1215 Query: 375 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 434 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1214 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1155 Query: 435 g 435 | Sbjct: 1154 g 1154
>ref|NM_185393.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1758 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 315 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 374 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1424 Query: 375 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 434 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1423 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1364 Query: 435 g 435 | Sbjct: 1363 g 1363
>gb|AF486280.2| Oryza sativa cytosolic 6-phosphogluconate dehydrogenase mRNA, complete cds Length = 1771 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 315 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 374 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1476 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1417 Query: 375 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 434 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1416 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1357 Query: 435 g 435 | Sbjct: 1356 g 1356
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 315 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 374 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 645444 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 645385 Query: 375 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 434 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 645384 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 645325 Query: 435 g 435 | Sbjct: 645324 g 645324
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 315 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 374 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51872 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 51813 Query: 375 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 434 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 51812 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 51753 Query: 435 g 435 | Sbjct: 51752 g 51752
>dbj|AK065920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D08, full insert sequence Length = 1758 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 315 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 374 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1424 Query: 375 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 434 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1423 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1364 Query: 435 g 435 | Sbjct: 1363 g 1363
>dbj|AK059699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C09, full insert sequence Length = 1549 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 315 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 374 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1215 Query: 375 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 434 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1214 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1155 Query: 435 g 435 | Sbjct: 1154 g 1154
>gb|AF061838.1|AF061838 Zea mays strain W64A x A182E putative cytosolic 6-phosphogluconate dehydrogenase (pdh2) mRNA, complete cds Length = 1686 Score = 163 bits (82), Expect = 6e-37 Identities = 109/118 (92%) Strand = Plus / Minus Query: 318 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 377 |||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 1522 atcttgaaccactcggtgtggaaagagccaggcatgtcgaccctctcgtaggtgtgagcc 1463 Query: 378 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtagg 435 ||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||| Sbjct: 1462 ccgaagtagtccctctgggcctgcaccaggttggcaggcagcctgtccctgcggtagg 1405
>gb|AY108834.1| Zea mays PCO144547 mRNA sequence Length = 1897 Score = 163 bits (82), Expect = 6e-37 Identities = 109/118 (92%) Strand = Plus / Minus Query: 318 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 377 |||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 1613 atcttgaaccactcggtgtggaaagagccaggcatgtcgaccctctcgtaggtgtgagcc 1554 Query: 378 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtagg 435 ||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||| Sbjct: 1553 ccgaagtagtccctctgggcctgcaccaggttggcaggcagcctgtccctgcggtagg 1496
>gb|AF037036.1|AF037036 Zea mays 6-phosphogluconate dehydrogenase gene, partial cds Length = 1599 Score = 107 bits (54), Expect = 3e-20 Identities = 100/116 (86%) Strand = Plus / Minus Query: 318 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 377 |||||| ||||||| |||||||| || || |||||||| ||||||||||| ||||| || Sbjct: 221 atcttgaaccactcggtgtggaaagaaccaggcatgtcaaccctctcgtacgtgtgagcg 162 Query: 378 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggta 433 ||||||||||| ||||| ||||| || |||||||| ||||||||||||| ||||| Sbjct: 161 ccgaagtagtctctctgagcctgcaccaggttggcgggaagcctgtcccygcggta 106
>gb|BT018534.1| Zea mays clone EL01N0435A08.d mRNA sequence Length = 1814 Score = 103 bits (52), Expect = 5e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 318 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 377 |||||| ||||||| |||||||| || || |||||||| ||||||||||| ||||| || Sbjct: 1539 atcttgaaccactcggtgtggaaagaaccaggcatgtcaaccctctcgtacgtgtgagcg 1480 Query: 378 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggta 433 ||||||||||| ||||| ||||| || |||||||| |||||||| ||||| ||||| Sbjct: 1479 ccgaagtagtctctctgagcctgcaccaggttggcgggaagcctatccctgcggta 1424
>gb|AY104004.1| Zea mays PCO119210 mRNA sequence Length = 1864 Score = 103 bits (52), Expect = 5e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 318 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 377 |||||| ||||||| |||||||| || || |||||||| ||||||||||| ||||| || Sbjct: 1593 atcttgaaccactcggtgtggaaagaaccaggcatgtcaaccctctcgtacgtgtgagcg 1534 Query: 378 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggta 433 ||||||||||| ||||| ||||| || |||||||| |||||||| ||||| ||||| Sbjct: 1533 ccgaagtagtctctctgagcctgcaccaggttggcgggaagcctatccctgcggta 1478
>gb|AF061837.1|AF061837 Zea mays strain W64A x A182E putative cytosolic 6-phosphogluconate dehydrogenase (pdh1) mRNA, complete cds Length = 1818 Score = 83.8 bits (42), Expect = 4e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 348 ggcatgtcgaccctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgagg 407 |||||||| ||||||||||| ||||| || ||||||||||| ||||| ||||| || ||| Sbjct: 1459 ggcatgtcaaccctctcgtacgtgtgagcgccgaagtagtctctctgagcctgcaccagg 1400 Query: 408 ttggcaggaagcctgtccctccggta 433 ||||| |||||||| ||||| ||||| Sbjct: 1399 ttggcgggaagcctatccctgcggta 1374
>ref|NM_001009467.1| Ovis aries 6-phosphogluconate dehydrogenase (decarboxylating) (6-PGDH), mRNA Length = 1918 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 363 tcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 412 ||||||||||||||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 1437 tcgtaggtgtgcgccccaaagtagtcgcgctgagcctggatgaggttggc 1388
>emb|X60195.1|OA6PDGH Ovine 6-pgdh mRNA for 6-phosphogluconate dehydrogenase Length = 1953 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 363 tcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 412 ||||||||||||||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 1437 tcgtaggtgtgcgccccaaagtagtcgcgctgagcctggatgaggttggc 1388
>ref|XM_515670.1| PREDICTED: Pan troglodytes similar to 6-phosphogluconate dehydrogenase, decarboxylating (LOC459464), mRNA Length = 1794 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1352 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1299
>gb|BC000368.2| Homo sapiens phosphogluconate dehydrogenase, mRNA (cDNA clone MGC:8331 IMAGE:2819330), complete cds Length = 1901 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1401 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1348
>ref|NM_002631.2| Homo sapiens phosphogluconate dehydrogenase (PGD), mRNA Length = 1937 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1454 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1401
>gb|AY532646.1| Capsicum annuum 6-phosphogluconate dehydrogenase mRNA, partial cds Length = 374 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 360 ctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 ||||| || ||||| |||||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 374 ctctcatatgtgtgagccccgaaatagtccctctgagcctgcacaaggtttgctggaagc 315 Query: 420 ct 421 || Sbjct: 314 ct 313
>gb|BT009740.1| Synthetic construct Homo sapiens phosphogluconate dehydrogenase mRNA, partial cds Length = 1452 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1364 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1311
>emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 1/7 Length = 340806 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 246079 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 246132
>emb|CR609478.1| full-length cDNA clone CS0DL007YL07 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1853 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1407 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1354
>emb|CR610891.1| full-length cDNA clone CS0DI028YE21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1855 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1404 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1351
>emb|CR610133.1| full-length cDNA clone CS0DI065YC03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1866 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1409 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1356
>emb|CR610062.1| full-length cDNA clone CS0DE012YD20 of Placenta of Homo sapiens (human) Length = 1849 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1409 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1356
>emb|CR608757.1| full-length cDNA clone CS0DI008YI13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1849 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1402 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1349
>emb|CR607764.1| full-length cDNA clone CS0DE005YC23 of Placenta of Homo sapiens (human) Length = 1877 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1409 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1356
>emb|CR604306.1| full-length cDNA clone CS0DI087YM04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1811 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1360 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1307
>gb|U30255.1|HSU30255 Homo sapiens phosphogluconate dehydrogenase (PGDH) mRNA, complete cds Length = 1536 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1370 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1317
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 12261 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 12314
>gb|AF520275.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-14 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520274.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-13 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520273.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-12 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520272.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-11 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520271.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-10 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520270.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-9 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520269.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-8 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520268.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-7 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520267.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-6 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520266.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-5 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520265.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-4 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520264.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-3 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520263.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-2 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AY891432.1| Synthetic construct Homo sapiens clone FLH014197.01L phosphogluconate dehydrogenase (PGD) mRNA, partial cds Length = 1452 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 419 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1364 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1311
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 415 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1892953 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1892900
>gb|AF394515.1| Porphyra yezoensis 6-phosphogluconate dehydrogenase (gnd) mRNA, partial cds Length = 1177 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 352 tgtcgaccctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttgg 411 |||| |||| |||||| ||||| || || |||||||| | ||||||||||| |||||||| Sbjct: 1081 tgtccacccgctcgtacgtgtgggcgccaaagtagtcgcgctgggcctggaggaggttgg 1022 Query: 412 c 412 | Sbjct: 1021 c 1021
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttg 410 |||||||||||| || ||||||||||| | |||||||||| ||||||| Sbjct: 1195356 ctcgtaggtgtgggcgccgaagtagtcgcgctgggcctgggtgaggttg 1195404
>gb|DQ493912.1| Anguilla anguilla 6-phosphogluconate dehydrogenase mRNA, partial cds Length = 290 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 412 ||||||||||| || || || |||||||||||||||| |||||||| Sbjct: 260 taggtgtgcgcgccaaaataatccctctgggcctggagcaggttggc 214
>emb|Z98269.1|DMC87B1 Drosophila melanogaster cosmid clone 87B1 Length = 40070 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctg 400 |||||||| || |||||||| |||||||||||||| Sbjct: 25460 taggtgtgggcgccgaagtaatccctctgggcctg 25426
>emb|X16638.1|SSPGDMR Pig pgd mRNA for 6-phosphogluconate dehydrogenase (EC. 1.1.1.44) Length = 1110 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 412 |||||||| ||||||||||| |||| ||| ||||||| |||||||| Sbjct: 665 taggtgtgagccccgaagtaatcccgctgcgcctggatcaggttggc 619
>ref|NM_057512.3| Drosophila melanogaster Phosphogluconate dehydrogenase CG3724-RA (Pgd), mRNA Length = 1895 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctg 400 |||||||| || |||||||| |||||||||||||| Sbjct: 1629 taggtgtgggcgccgaagtaatccctctgggcctg 1595
>gb|AY089447.1| Drosophila melanogaster AT26455 full insert cDNA Length = 1915 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctg 400 |||||||| || |||||||| |||||||||||||| Sbjct: 1629 taggtgtgggcgccgaagtaatccctctgggcctg 1595
>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177724 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctg 400 |||||||| || |||||||| |||||||||||||| Sbjct: 122259 taggtgtgggcgccgaagtaatccctctgggcctg 122225
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.095 Identities = 35/39 (89%) Strand = Plus / Minus Query: 363 tcgtaggtgtgcgccccgaagtagtccctctgggcctgg 401 ||||||||||| || ||||||||||| | |||||||||| Sbjct: 1303977 tcgtaggtgtgggcgccgaagtagtcgcgctgggcctgg 1303939
>gb|AY676468.1| Zalophus californianus microsatellite ZcCgDh46 sequence Length = 456 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 ggaagtagtggagggactggaga 124 ||||||||||||||||||||||| Sbjct: 412 ggaagtagtggagggactggaga 434
>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete sequence Length = 292830 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctg 400 |||||||| || |||||||| |||||||||||||| Sbjct: 81938 taggtgtgggcgccgaagtaatccctctgggcctg 81904
>gb|M80598.1|DROPGD Drosophila melanogaster 6-phosphogluconate dehydrogenase (Pgd) gene, complete cds Length = 4767 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctg 400 |||||||| || |||||||| |||||||||||||| Sbjct: 4059 taggtgtgggcgccgaagtaatccctctgggcctg 4025
>gb|U02288.1|DSU02288 Drosophila simulans 6-phosphogluconate dehydrogenase (Pgd) gene, complete cds Length = 4290 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 366 taggtgtgcgccccgaagtagtccctctgggcctg 400 |||||||| || |||||||| |||||||||||||| Sbjct: 3585 taggtgtgggcgccgaagtaatccctctgggcctg 3551
>ref|XM_500938.1| Yarrowia lipolytica CLIB122, YALI0B15598g predicted mRNA Length = 1470 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 365 gtaggtgtgcgccccgaagtagtccctctgggcctgga 402 ||||||||| || ||||||||||| | ||||||||||| Sbjct: 1383 gtaggtgtgggcgccgaagtagtctcgctgggcctgga 1346
>gb|U14465.1|EVU14465 Escherichia vulneris ATCC 33821 6-phosphogluconate dehydrogenase (gnd) gene, partial cds Length = 1335 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 365 gtaggtgtgcgccccgaagtagtccctctgggcctgga 402 |||||| ||||| ||||||||||| | ||||||||||| Sbjct: 1326 gtaggtatgcgcaccgaagtagtcgcgctgggcctgga 1289
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 365 gtaggtgtgcgccccgaagtagtccctctgggcctgga 402 ||||||||| || ||||||||||| | ||||||||||| Sbjct: 2070833 gtaggtgtgggcgccgaagtagtctcgctgggcctgga 2070796
>gb|AC139027.12| Mus musculus chromosome 18, clone RP23-396C22, complete sequence Length = 195153 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gaaaacacattttattcaaac 25 ||||||||||||||||||||| Sbjct: 29580 gaaaacacattttattcaaac 29600
>gb|AC004648.1| Homo sapiens chromosome 5, PAC clone 17e19 (LBNL H148), complete sequence Length = 140101 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 attcaaactaattcagaataa 38 ||||||||||||||||||||| Sbjct: 85335 attcaaactaattcagaataa 85355
>ref|XM_776301.1| PREDICTED: Strongylocentrotus purpuratus similar to 6-phosphogluconate dehydrogenase, decarboxylating (LOC575941), mRNA Length = 1890 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 362 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaag 418 |||||||||||| || || |||||||| | ||| ||||||| ||| ||||| ||||| Sbjct: 1383 ctcgtaggtgtgtgcaccaaagtagtcacgctgagcctggatgagattggctggaag 1327
>emb|AJ843880.1| Platichthys flesus partial mRNA for 6-Phosphogluconate dehydrogenase (pgd gene) Length = 918 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 aagtagtccctctgggcctggacgaggtt 409 ||||| |||||||||||||||| |||||| Sbjct: 617 aagtaatccctctgggcctggaggaggtt 589
>gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, complete sequence Length = 234778 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gaaaacacattttattcaaac 25 ||||||||||||||||||||| Sbjct: 148102 gaaaacacattttattcaaac 148122
>gb|AC102055.13| Mus musculus chromosome 18, clone RP23-52J5, complete sequence Length = 220747 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gaaaacacattttattcaaac 25 ||||||||||||||||||||| Sbjct: 5283 gaaaacacattttattcaaac 5263
>gb|AC182751.1| Gasterosteus aculeatus clone VMRC26-154K14, complete sequence Length = 166500 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 ggagccgggcatgtcgaccct 361 ||||||||||||||||||||| Sbjct: 123114 ggagccgggcatgtcgaccct 123094
>gb|AC022448.7| Homo sapiens chromosome 5 clone RP11-78G3, complete sequence Length = 111000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 aaaacacattttattcaaact 26 ||||||||||||||||||||| Sbjct: 57229 aaaacacattttattcaaact 57249
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 366 taggtgtgcgccccgaagtagtccc 390 |||||||||||||||||| |||||| Sbjct: 8642217 taggtgtgcgccccgaagaagtccc 8642241
>gb|AC164418.10| Mus musculus chromosome 1, clone RP23-431J24, complete sequence Length = 189965 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggggaaaacacattttatt 20 |||||||||||||||||||| Sbjct: 12990 aggggaaaacacattttatt 12971
>gb|AC119842.9| Mus musculus chromosome 1, clone RP23-277F23, complete sequence Length = 175179 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggggaaaacacattttatt 20 |||||||||||||||||||| Sbjct: 53126 aggggaaaacacattttatt 53107
>gb|AC115723.13| Mus musculus chromosome 5, clone RP23-17D18, complete sequence Length = 206470 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccactctgtgtggaaggagc 345 |||||||||||||||||||| Sbjct: 142537 ccactctgtgtggaaggagc 142518
>gb|AC132835.7| Mus musculus chromosome 1, clone RP24-490C20, complete sequence Length = 148948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggggaaaacacattttatt 20 |||||||||||||||||||| Sbjct: 1502 aggggaaaacacattttatt 1521
>gb|AC183617.3| Pan troglodytes BAC clone CH251-104G17 from chromosome 4, complete sequence Length = 172744 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggggaaaacacattttatt 20 |||||||||||||||||||| Sbjct: 127096 aggggaaaacacattttatt 127115
>gb|AC113276.9| Mus musculus chromosome 5, clone RP23-383E21, complete sequence Length = 245002 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gtagaaaataaatacaggac 161 |||||||||||||||||||| Sbjct: 40921 gtagaaaataaatacaggac 40940
>gb|AC103363.6| Mus musculus chromosome 17, clone RP24-247H9, complete sequence Length = 222909 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ttgtagaaaataaatacagg 159 |||||||||||||||||||| Sbjct: 161597 ttgtagaaaataaatacagg 161578
>emb|AL354675.20| Human DNA sequence from clone RP11-217F15 on chromosome 9, complete sequence Length = 180185 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 aaaacacattttattcaaactaat 29 ||||||||||||||||||| |||| Sbjct: 166031 aaaacacattttattcaaaataat 166008
>emb|AL138685.21| Human DNA sequence from clone RP11-186J16 on chromosome 13 Contains the 3' end of the LHFP gene for lipoma HMGIC fusion partner, complete sequence Length = 84686 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ggagggactggagagaatat 130 |||||||||||||||||||| Sbjct: 48411 ggagggactggagagaatat 48430
>emb|AL049648.9|HSJ1178H5 Human DNA sequence from clone RP5-1178H5 on chromosome 20 Contains the RPL17P1 gene for ribosomal protein L17 pseudogene 1 a novel gene and part of the C20orf26 gene, complete sequence Length = 126130 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tagtaaaaattaaacggcag 195 |||||||||||||||||||| Sbjct: 107285 tagtaaaaattaaacggcag 107266
>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 5/10 Length = 349799 Score = 40.1 bits (20), Expect = 5.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 325 accactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgccccgaagt 384 ||||||| |||||||||||||| | |||||| | || |||||||||||| |||||| Sbjct: 136142 accactcggtgtggaaggagccatccttgtcgatgcgcttgtaggtgtgcgcaccgaaga 136201 Query: 385 agtc 388 |||| Sbjct: 136202 agtc 136205
>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142650 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaatagtaaaaattaaacgg 192 |||||||||||||||||||| Sbjct: 38597 gaatagtaaaaattaaacgg 38616
>gb|AC022507.26| Homo sapiens 12 BAC RP11-25J3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 369 gtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 412 ||||| ||||||||||| |||| ||| | ||||| ||||||||| Sbjct: 102703 gtgtgagccccgaagtaatcccgctgagtctggatgaggttggc 102660
>gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tatgtgatctccttgtagaa 147 |||||||||||||||||||| Sbjct: 104843 tatgtgatctccttgtagaa 104862
>gb|AC090964.10| Papio anubis clone rp41-177g23, complete sequence Length = 182747 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tatgtgatctccttgtagaa 147 |||||||||||||||||||| Sbjct: 91765 tatgtgatctccttgtagaa 91746
>gb|AC096762.3| Homo sapiens BAC clone RP11-621I20 from 4, complete sequence Length = 195937 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggggaaaacacattttatt 20 |||||||||||||||||||| Sbjct: 115985 aggggaaaacacattttatt 115966
>dbj|AK161172.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831433I04 product:Castration induced prostatic apoptosis related protein-1, (CIPAR- 1) homolog [Rattus norvegicus], full insert sequence Length = 4942 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ccactctgtgtggaaggagc 345 |||||||||||||||||||| Sbjct: 1534 ccactctgtgtggaaggagc 1553
>dbj|AK167402.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530012D03 product:Castration induced prostatic apoptosis related protein-1, (CIPAR- 1) homolog [Rattus norvegicus], full insert sequence Length = 2072 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ccactctgtgtggaaggagc 345 |||||||||||||||||||| Sbjct: 1560 ccactctgtgtggaaggagc 1579
>gb|AC154004.7| Mus musculus 6 BAC RP24-169F24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168376 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 gaagtagtggagggactggagaga 126 |||||| ||||||||||||||||| Sbjct: 48900 gaagtattggagggactggagaga 48877
>gb|AF287263.1|AF287263 Mus musculus ATP-binding cassette 1, sub-family A, member 1 (Abca1) gene, complete cds Length = 278572 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 tcttgtaccactctgtgtgg 338 |||||||||||||||||||| Sbjct: 4841 tcttgtaccactctgtgtgg 4860
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 5.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 325 accactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgccccgaagt 384 ||||||| |||||||||||||| | |||||| | || |||||||||||| |||||| Sbjct: 1530367 accactcggtgtggaaggagccatccttgtcgatgcgcttgtaggtgtgcgcaccgaaga 1530426 Query: 385 agtc 388 |||| Sbjct: 1530427 agtc 1530430
>ref|NM_145562.1| Mus musculus RIKEN cDNA 9130213B05 gene (9130213B05Rik), mRNA Length = 2101 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ccactctgtgtggaaggagc 345 |||||||||||||||||||| Sbjct: 1572 ccactctgtgtggaaggagc 1591
>gb|AF542178.1| Neisseria polysaccharea phenylalanyl-tRNA synthetase alpha chain (pheS) gene, partial cds; hypothetical protein, truncated very short patch repair endonuclease, methylase, hypothetical protein, and hypothetical protein genes, complete cds; and phenylalanyl-tRNA synthetase beta chain (pheT) gene, partial cds Length = 2455 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tcttccctccagggtttgat 92 |||||||||||||||||||| Sbjct: 1948 tcttccctccagggtttgat 1929
>gb|AC078820.28| Homo sapiens 12 BAC RP11-114H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164812 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 369 gtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 412 ||||| ||||||||||| |||| ||| | ||||| ||||||||| Sbjct: 95710 gtgtgagccccgaagtaatcccgctgagtctggatgaggttggc 95753
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 376 ccccgaagtagtccctctgggcctggac 403 ||||||||||| ||||||||| |||||| Sbjct: 1663461 ccccgaagtaggccctctggggctggac 1663488
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ctccttgtagaaaataaata 155 |||||||||||||||||||| Sbjct: 2606395 ctccttgtagaaaataaata 2606376
>gb|BC006604.1| Mus musculus RIKEN cDNA 9130213B05 gene, mRNA (cDNA clone MGC:11719 IMAGE:3966312), complete cds Length = 2101 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ccactctgtgtggaaggagc 345 |||||||||||||||||||| Sbjct: 1572 ccactctgtgtggaaggagc 1591
>gb|AC115062.13| Mus musculus chromosome 3, clone RP24-399B3, complete sequence Length = 198727 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aaggactcatgactggcagc 232 |||||||||||||||||||| Sbjct: 144520 aaggactcatgactggcagc 144539
>gb|AC154001.5| Mus musculus 6 BAC RP24-419M4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183830 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 gaagtagtggagggactggagaga 126 |||||| ||||||||||||||||| Sbjct: 89596 gaagtattggagggactggagaga 89619
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 376 ccccgaagtagtccctctgggcctggac 403 ||||||||||| ||||||||| |||||| Sbjct: 1342477 ccccgaagtaggccctctggggctggac 1342504
>gb|AC154286.1| Mus musculus BAC clone RP24-476G22 from 17, complete sequence Length = 181094 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ttgtagaaaataaatacagg 159 |||||||||||||||||||| Sbjct: 28645 ttgtagaaaataaatacagg 28626
>emb|AL833806.7| Mouse DNA sequence from clone RP23-425H11 on chromosome 4, complete sequence Length = 55805 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tcttgtaccactctgtgtgg 338 |||||||||||||||||||| Sbjct: 50955 tcttgtaccactctgtgtgg 50936
>emb|AL133304.4|CNS01DUL Human chromosome 14 DNA sequence BAC R-116N8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 141905 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 tgtagaaaataaatacagga 160 |||||||||||||||||||| Sbjct: 83472 tgtagaaaataaatacagga 83453 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,744,147 Number of Sequences: 3902068 Number of extensions: 4744147 Number of successful extensions: 85413 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 85138 Number of HSP's gapped (non-prelim): 275 length of query: 435 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 413 effective length of database: 17,147,199,772 effective search space: 7081793505836 effective search space used: 7081793505836 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)