ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet70e04 |
|---|---|
| Clone Library Name | barley_pub |
>ALF_ORYSA (P17784) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC| 4.1.2.13) (Gravity-specific protein GSC 233) Length = 358 Score = 52.0 bits (123), Expect = 4e-07 Identities = 23/24 (95%), Positives = 23/24 (95%) Frame = -2 Query: 347 GTYKGDATLGEGASESLHVKDYKY 276 GTYKGDA LGEGASESLHVKDYKY Sbjct: 335 GTYKGDAVLGEGASESLHVKDYKY 358
>ALF_CICAR (O65735) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 359 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/24 (87%), Positives = 23/24 (95%) Frame = -2 Query: 347 GTYKGDATLGEGASESLHVKDYKY 276 GTYKG++ LGEGASESLHVKDYKY Sbjct: 336 GTYKGNSQLGEGASESLHVKDYKY 359
>ALF2_PEA (P46257) Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 (EC| 4.1.2.13) Length = 359 Score = 45.4 bits (106), Expect = 3e-05 Identities = 20/24 (83%), Positives = 21/24 (87%) Frame = -2 Query: 347 GTYKGDATLGEGASESLHVKDYKY 276 GTYKG + LG GASESLHVKDYKY Sbjct: 336 GTYKGASNLGAGASESLHVKDYKY 359
>ALF_MAIZE (P08440) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 355 Score = 35.0 bits (79), Expect = 0.046 Identities = 17/24 (70%), Positives = 18/24 (75%) Frame = -2 Query: 347 GTYKGDATLGEGASESLHVKDYKY 276 GTYKGDA +ESLHVKDYKY Sbjct: 335 GTYKGDAAAD---TESLHVKDYKY 355
>ALF_SPIOL (P29356) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 357 Score = 33.5 bits (75), Expect = 0.13 Identities = 17/24 (70%), Positives = 18/24 (75%) Frame = -2 Query: 347 GTYKGDATLGEGASESLHVKDYKY 276 G Y+G A G ASESLHVKDYKY Sbjct: 335 GKYQGGAG-GADASESLHVKDYKY 357
>ALF1_PEA (P46256) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC| 4.1.2.13) Length = 357 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/24 (66%), Positives = 17/24 (70%) Frame = -2 Query: 347 GTYKGDATLGEGASESLHVKDYKY 276 G Y G + G ASESLHVKDYKY Sbjct: 335 GKYGGGSGTGL-ASESLHVKDYKY 357
>CYB_EULMM (O99797) Cytochrome b| Length = 379 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +3 Query: 39 ITGPWNKNLLLQFTIPSTRFTGY 107 +TG WN ++L FT+ +T F GY Sbjct: 109 LTGTWNIGIILLFTVMATAFMGY 131
>TAM_ECOLI (P76145) Trans-aconitate 2-methyltransferase (EC 2.1.1.144)| Length = 251 Score = 28.5 bits (62), Expect = 4.3 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +3 Query: 45 GPWNKNLLLQFTIPSTRFTGYSSTPKRNYYGIMKASSALLKTRF---DIR 185 GP N LLQ P+ R TG S+P I +A SAL +F DIR Sbjct: 40 GPGNSTALLQQRWPAARITGIDSSPAM----IAEARSALPDCQFVEADIR 85
>CP51_ISSOR (Q02315) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1)| (Sterol 14-alpha demethylase) (Lanosterol 14-alpha demethylase) (P450-14DM) (Fragment) Length = 414 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +2 Query: 23 LYEQENYRTMEQKPAAPIYDTQHPIYRVFINSKKKLLRYYESKF 154 +Y+ N++ MEQK A + T+ R K ++L+Y+ + F Sbjct: 77 IYDCPNWKLMEQKKFAKVALTKESFIRYVPLIKDEMLKYFNANF 120
>TRI4_FUSSP (Q12612) Trichodiene oxygenase (EC 1.14.-.-) (Cytochrome P450 58)| Length = 520 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = -1 Query: 264 RWVAVARLGVPLTSIIVWFSES*DISFGYRTSFLIMLNLLS*YRSSFFLELMNT 103 RW+ A +PL I FS+ GY +F M +S ++ +EL +T Sbjct: 430 RWIEAAEKKIPLKKYITNFSQGSRQCIGYTMAFAEMYLAMSRIARAYDVELYDT 483
>CYB_ZALCA (Q36266) Cytochrome b| Length = 379 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 30 SRKITGPWNKNLLLQFTIPSTRFTGY 107 S +T WN ++L FTI +T F GY Sbjct: 106 SYTLTETWNIGIILLFTIMATAFMGY 131
>CYB_EUMJU (Q34471) Cytochrome b| Length = 379 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 30 SRKITGPWNKNLLLQFTIPSTRFTGY 107 S +T WN ++L FTI +T F GY Sbjct: 106 SYTLTETWNIGIILLFTIMATAFMGY 131
>CYB_EULMF (O99798) Cytochrome b| Length = 379 Score = 28.1 bits (61), Expect = 5.6 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 39 ITGPWNKNLLLQFTIPSTRFTGY 107 +T WN ++L FT+ +T F GY Sbjct: 109 LTETWNMGIILLFTVMATAFMGY 131
>CYB_ARCGZ (Q33688) Cytochrome b| Length = 379 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 30 SRKITGPWNKNLLLQFTIPSTRFTGY 107 S +T WN ++L FTI +T F GY Sbjct: 106 SYTLTETWNIGIILLFTIMATAFMGY 131
>CYB_HYSAF (Q04910) Cytochrome b| Length = 384 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 30 SRKITGPWNKNLLLQFTIPSTRFTGY 107 S T WN +LL FT+ +T F GY Sbjct: 106 SYMFTETWNIGILLLFTVMATAFMGY 131
>GCH1_THETN (Q8R7N2) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 188 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +2 Query: 110 INSKKKLLRYYESKFSIIKNEVRYPKDISQDSENQTMILVSGTP 241 + + ++ R YE FS + +V+ I Q+ E+Q +ILV P Sbjct: 28 LETPDRVARMYEEIFSGLHTDVKDVIKIFQEDEHQEIILVKDIP 71
>Y4RJ_RHISN (P55643) Putative transposase y4rJ| Length = 396 Score = 27.3 bits (59), Expect = 9.5 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 3/88 (3%) Frame = +1 Query: 7 ITGFTIV*AGKLQDHGTKTCCSNLRYPAPDLQGIHQLQKETTTVL*KQVQHY*K-RGSIS 183 I G T+V A G C+ LR P P+ + ++ +E + ++V+H + +G + Sbjct: 125 IDGETLVRALLAYKRGEPRVCAMLRVPTPEEEDRRRISRERKALTNERVRHVNRIKGLLF 184 Query: 184 EGYISGL*KPNND--TGKRDAQTGHSNP 261 +SG D T + +TG P Sbjct: 185 SQGVSGYQPLRRDRRTRLEELRTGDGRP 212
>PTMCB_BACST (P50852) PTS system mannitol-specific EIICB component (EIICB-Mtl)| (EII-Mtl) [Includes: Mannitol permease IIC component (PTS system mannitol-specific EIIC component); Mannitol-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS Length = 471 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/45 (26%), Positives = 21/45 (46%) Frame = +3 Query: 84 PSTRFTGYSSTPKRNYYGIMKASSALLKTRFDIRRIYLRTLKTKQ 218 P + F + TPK NY G++ F + I+L++ K + Sbjct: 303 PGSIFALLAMTPKGNYLGVLAGVLVATAVSFFVASIFLKSAKNNE 347
>CYB_PROSA (Q6ELU8) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 42 TGPWNKNLLLQFTIPSTRFTGY 107 T WN +LL FT+ +T F GY Sbjct: 110 TETWNIGILLLFTVMATAFMGY 131
>CYB_OMMRO (Q678S8) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 30 SRKITGPWNKNLLLQFTIPSTRFTGY 107 S T WN ++L FTI +T F GY Sbjct: 106 SYTFTETWNIGIILLFTIMATAFMGY 131
>CYB_MIRLE (Q35019) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 30 SRKITGPWNKNLLLQFTIPSTRFTGY 107 S T WN ++L FTI +T F GY Sbjct: 106 SYTFTETWNIGIILLFTIMATAFMGY 131
>CYB_MICMU (Q9G0S9) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 39 ITGPWNKNLLLQFTIPSTRFTGY 107 +T WN ++L FT+ +T F GY Sbjct: 109 LTETWNIGIILLFTVMATAFMGY 131
>CYB_LOBCR (Q678S9) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 30 SRKITGPWNKNLLLQFTIPSTRFTGY 107 S T WN ++L FTI +T F GY Sbjct: 106 SYTFTETWNIGIILLFTIMATAFMGY 131
>CYB_HALGR (P38593) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 30 SRKITGPWNKNLLLQFTIPSTRFTGY 107 S T WN ++L FTI +T F GY Sbjct: 106 SYTFTETWNIGIILLFTIMATAFMGY 131
>CYB_GALEE (Q85PP0) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +3 Query: 30 SRKITGPWNKNLLLQFTIPSTRFTGY 107 S + WN +LL FT+ +T F GY Sbjct: 106 SHTFSETWNVGILLLFTVMATAFMGY 131
>CYB_EULRU (O99800) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 39 ITGPWNKNLLLQFTIPSTRFTGY 107 +T WN ++L FT+ +T F GY Sbjct: 109 LTETWNIGIILLFTVMATAFMGY 131
>CYB_EULMO (O99799) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 39 ITGPWNKNLLLQFTIPSTRFTGY 107 +T WN ++L FT+ +T F GY Sbjct: 109 LTETWNIGIILLFTVMATAFMGY 131
>CYB_EULFC (Q34459) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 39 ITGPWNKNLLLQFTIPSTRFTGY 107 +T WN ++L FT+ +T F GY Sbjct: 109 LTETWNIGIILLFTVMATAFMGY 131
>CYB_EULCO (Q5VJ65) Cytochrome b| Length = 379 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 39 ITGPWNKNLLLQFTIPSTRFTGY 107 +T WN ++L FT+ +T F GY Sbjct: 109 LTETWNIGIILLFTVMATAFMGY 131 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,564,958 Number of Sequences: 219361 Number of extensions: 1120048 Number of successful extensions: 3895 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3819 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3895 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
