ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet70d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016405.1| Zea mays clone Contig238 mRNA sequence 100 8e-18
2gb|AY104890.1| Zea mays PCO071167 mRNA sequence 100 8e-18
3gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 70 7e-09
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
5dbj|AK072479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 70 7e-09
7dbj|AK120839.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 62 2e-06
9gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 62 2e-06
10gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare str... 62 2e-06
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
12emb|AL732469.8| Mouse DNA sequence from clone RP23-434B15 on chr... 50 0.006
13ref|NM_197762.1| Oryza sativa (japonica cultivar-group) putative... 48 0.025
14emb|AJ458315.1|CNU458315 Cocos nucifera microsatellite DNA, clon... 48 0.025
15gb|AC069421.9| Homo sapiens 3 BAC RP11-528A4 (Roswell Park Cance... 44 0.40
16dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 0.40
17gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome... 44 0.40
18gb|AC127361.4| Mus musculus BAC clone RP23-125M8 from chromosome... 42 1.6
19gb|AC124716.4| Mus musculus BAC clone RP24-144K17 from chromosom... 42 1.6
20emb|AL445587.10| Human DNA sequence from clone RP11-429D3 on chr... 42 1.6
21emb|BX294659.9| Zebrafish DNA sequence from clone DKEYP-15D12 in... 42 1.6
22emb|AL672230.6| Mouse DNA sequence from clone RP23-56L5 on chrom... 42 1.6
23emb|AL929003.17| Zebrafish DNA sequence from clone DKEY-235D18 i... 42 1.6
24gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, c... 42 1.6
25gb|AC142112.3| Mus musculus BAC clone RP24-87H1 from 12, complet... 42 1.6
26gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, compl... 42 1.6
27ref|XM_510008.1| PREDICTED: Pan troglodytes similar to MAX prote... 40 6.2
28gb|AC099629.6| Mus musculus chromosome 15, clone RP24-86K17, com... 40 6.2
29gb|AC002453.1| Homo sapiens BAC clone GS1-440B14 from 7, complet... 40 6.2
30gb|AC132451.3| Mus musculus BAC clone RP23-194C20 from chromosom... 40 6.2
31emb|X66867.1|HSMAXG H.sapiens max gene 40 6.2
32ref|NM_145112.1| Homo sapiens MYC associated factor X (MAX), tra... 40 6.2
33ref|NM_002382.3| Homo sapiens MYC associated factor X (MAX), tra... 40 6.2
34ref|NM_145113.1| Homo sapiens MYC associated factor X (MAX), tra... 40 6.2
35emb|AL683834.9| Human DNA sequence from clone RP11-159F17 on chr... 40 6.2
36gb|AC115509.5| Rattus norvegicus 2 BAC CH230-382P14 (Children's ... 40 6.2
37gb|AC154784.2| Mus musculus BAC clone RP23-90B4 from chromosome ... 40 6.2
38gb|BC036092.1| Homo sapiens MYC associated factor X, mRNA (cDNA ... 40 6.2
39emb|CR619150.1| full-length cDNA clone CS0DI059YB06 of Placenta ... 40 6.2
40emb|CR607503.1| full-length cDNA clone CS0DB009YH16 of Neuroblas... 40 6.2
41emb|CR600362.1| full-length cDNA clone CS0DF013YF21 of Fetal bra... 40 6.2
42gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gen... 40 6.2
43gb|AC012157.21| Homo sapiens 12 BAC RP11-493P1 (Roswell Park Can... 40 6.2
44gb|AC007912.6|AC007912 Homo sapiens chromosome , clone RP11-8A1,... 40 6.2
45emb|BX294657.11| Zebrafish DNA sequence from clone DKEY-21K18 in... 40 6.2
46gb|BC025685.1| Homo sapiens MYC associated factor X, transcript ... 40 6.2
47gb|BC004516.2| Homo sapiens MYC associated factor X, transcript ... 40 6.2
48gb|BC003525.1| Homo sapiens MYC associated factor X, transcript ... 40 6.2
49emb|AL139022.4|CNS01DX4 Human chromosome 14 DNA sequence BAC R-8... 40 6.2
50gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.2
51emb|AL833643.1|HSM804956 Homo sapiens mRNA; cDNA DKFZp686O0679 (... 40 6.2
52gb|BC027924.1| Homo sapiens MYC associated factor X, mRNA (cDNA ... 40 6.2
53dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.2
54gb|AC154519.2| Mus musculus BAC clone RP23-216L13 from chromosom... 40 6.2
55emb|AL832393.1|HSM803701 Homo sapiens mRNA; cDNA DKFZp667K1712 (... 40 6.2 
>gb|BT016405.1| Zea mays clone Contig238 mRNA sequence
          Length = 1161

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 144/174 (82%), Gaps = 1/174 (0%)
 Strand = Plus / Minus

                                                                       
Query: 286 gtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcctggcac 345
           ||||||||||||||  ||| ||||||| |  |||||||| || || || ||||| |||||
Sbjct: 874 gtaaggcacaatgtacttcttcatgtcacctttggagataccaagatgacctcccggcac 815

                                                                       
Query: 346 cgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtcttcctg 405
            ||||| ||||| || ||||| || || ||||| | ||||| ||| ||||||||||||| 
Sbjct: 814 agacacaaacttcacccgccctgcttcatccagtgtcttcaaaccaatccagtcttcctc 755

                                                                 
Query: 406 atacagctttgtctgctgaggaggtaggactggctc-aaggctccatcagggta 458
           |||||| || |||| |||||| ||||| ||||| || |||||||||||||||||
Sbjct: 754 atacagtttcgtcttctgaggtggtagaactggatcaaaggctccatcagggta 701
to top
>gb|AY104890.1| Zea mays PCO071167 mRNA sequence
          Length = 1683

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 144/174 (82%), Gaps = 1/174 (0%)
 Strand = Plus / Minus

                                                                       
Query: 286 gtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcctggcac 345
           ||||||||||||||  ||| ||||||| |  |||||||| || || || ||||| |||||
Sbjct: 944 gtaaggcacaatgtacttcttcatgtcacctttggagataccaagatgacctcccggcac 885

                                                                       
Query: 346 cgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtcttcctg 405
            ||||| ||||| || ||||| || || ||||| | ||||| ||| ||||||||||||| 
Sbjct: 884 agacacaaacttcacccgccctgcttcatccagtgtcttcaaaccaatccagtcttcctc 825

                                                                 
Query: 406 atacagctttgtctgctgaggaggtaggactggctc-aaggctccatcagggta 458
           |||||| || |||| |||||| ||||| ||||| || |||||||||||||||||
Sbjct: 824 atacagtttcgtcttctgaggtggtagaactggatcaaaggctccatcagggta 771
to top
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                         
Query: 281   ttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcct 340
             |||||||| ||||| ||||  ||| || |||| ||  ||||||||| |||||| ||||||
Sbjct: 17009 ttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacctcct 16950

                                                                        
Query: 341   ggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtc 399
             ||||| || |||||||| || ||||| ||||| ||||  |||||||  |||||||||||
Sbjct: 16949 ggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatccagtc 16891
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                            
Query: 281      ttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcct 340
                |||||||| ||||| ||||  ||| || |||| ||  ||||||||| |||||| ||||||
Sbjct: 21702326 ttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacctcct 21702267

                                                                           
Query: 341      ggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtc 399
                ||||| || |||||||| || ||||| ||||| ||||  |||||||  |||||||||||
Sbjct: 21702266 ggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatccagtc 21702208
to top
>dbj|AK072479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126M16, full
            insert sequence
          Length = 1353

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                        
Query: 281  ttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcct 340
            |||||||| ||||| ||||  ||| || |||| ||  ||||||||| |||||| ||||||
Sbjct: 1006 ttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacctcct 947

                                                                       
Query: 341  ggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtc 399
            ||||| || |||||||| || ||||| ||||| ||||  |||||||  |||||||||||
Sbjct: 946  ggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatccagtc 888
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                            
Query: 281      ttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcct 340
                |||||||| ||||| ||||  ||| || |||| ||  ||||||||| |||||| ||||||
Sbjct: 21713989 ttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacctcct 21713930

                                                                           
Query: 341      ggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtc 399
                ||||| || |||||||| || ||||| ||||| ||||  |||||||  |||||||||||
Sbjct: 21713929 ggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatccagtc 21713871
to top
>dbj|AK120839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022G01, full
           insert sequence
          Length = 1229

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Minus

                                                                       
Query: 279 ccttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctc 338
           |||||||||| ||||| ||||  ||| |||||||  | ||||| || |||||||| || |
Sbjct: 937 ccttcaagtagggcacgatgtacttcatcatgtcagtcttggaaatacccaggtgccccc 878

                                                                       
Query: 339 ctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagt 398
           ||||||| |||||||| || |||| |||  | || ||||| | ||| ||||| |||||||
Sbjct: 877 ctggcacggacacgaatttcactctcccctcatcatccagcgtcttgagaccaatccagt 818

                                                
Query: 399 cttcctgatacagctttgtctgctgaggaggtaggac 435
           | |||   ||||||||||||| |||||| || |||||
Sbjct: 817 cctccatgtacagctttgtcttctgagggggcaggac 781
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                         
Query: 279   ccttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctc 338
             |||||||||| ||||| ||||  ||| |||||||  | ||||| || |||||||| || |
Sbjct: 88575 ccttcaagtagggcacgatgtacttcatcatgtcagtcttggaaatacccaggtgccccc 88516

                                                                         
Query: 339   ctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagt 398
             ||||||| |||||||| || |||| |||  | || ||||| | ||| ||||| |||||||
Sbjct: 88515 ctggcacggacacgaatttcactctcccctcatcatccagcgtcttgagaccaatccagt 88456

                                    
Query: 399   cttcctgatacagctttgtctgc 421
             | |||   |||||||||||||||
Sbjct: 88455 cctccatgtacagctttgtctgc 88433
to top
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                         
Query: 279   ccttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctc 338
             |||||||||| ||||| ||||  ||| |||||||  | ||||| || |||||||| || |
Sbjct: 22575 ccttcaagtagggcacgatgtacttcatcatgtcagtcttggaaatacccaggtgccccc 22516

                                                                         
Query: 339   ctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagt 398
             ||||||| |||||||| || |||| |||  | || ||||| | ||| ||||| |||||||
Sbjct: 22515 ctggcacggacacgaatttcactctcccctcatcatccagcgtcttgagaccaatccagt 22456

                                    
Query: 399   cttcctgatacagctttgtctgc 421
             | |||   |||||||||||||||
Sbjct: 22455 cctccatgtacagctttgtctgc 22433
to top
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0079B22, from chromosome 3, complete sequence
          Length = 125217

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                         
Query: 279   ccttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctc 338
             |||||||||| ||||| ||||  ||| |||||||  | ||||| || |||||||| || |
Sbjct: 36643 ccttcaagtagggcacgatgtacttcatcatgtcagtcttggaaatacccaggtgccccc 36702

                                                                         
Query: 339   ctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagt 398
             ||||||| |||||||| || |||| |||  | || ||||| | ||| ||||| |||||||
Sbjct: 36703 ctggcacggacacgaatttcactctcccctcatcatccagcgtcttgagaccaatccagt 36762

                                    
Query: 399   cttcctgatacagctttgtctgc 421
             | |||   |||||||||||||||
Sbjct: 36763 cctccatgtacagctttgtctgc 36785
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             complete sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                         
Query: 279   ccttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctc 338
             |||||||||| ||||| ||||  ||| |||||||  | ||||| || |||||||| || |
Sbjct: 88575 ccttcaagtagggcacgatgtacttcatcatgtcagtcttggaaatacccaggtgccccc 88516

                                                                         
Query: 339   ctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagt 398
             ||||||| |||||||| || |||| |||  | || ||||| | ||| ||||| |||||||
Sbjct: 88515 ctggcacggacacgaatttcactctcccctcatcatccagcgtcttgagaccaatccagt 88456

                                    
Query: 399   cttcctgatacagctttgtctgc 421
             | |||   |||||||||||||||
Sbjct: 88455 cctccatgtacagctttgtctgc 88433
to top
>emb|AL732469.8| Mouse DNA sequence from clone RP23-434B15 on chromosome X, complete
             sequence
          Length = 197111

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 45    cctttgatttttgtttttacagttg 69
             |||||||||||||||||||||||||
Sbjct: 65383 cctttgatttttgtttttacagttg 65407
to top
>ref|NM_197762.1| Oryza sativa (japonica cultivar-group) putative palmitoyl-protein
           thioesterase (OSJNBa0027P10.1), mRNA
          Length = 1212

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 336 ctcctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatcc 395
           |||||||||| || |||||||| || ||||| ||||| ||||  |||||||  |||||||
Sbjct: 859 ctcctggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatcc 800

               
Query: 396 agtc 399
           ||||
Sbjct: 799 agtc 796
to top
>emb|AJ458315.1|CNU458315 Cocos nucifera microsatellite DNA, clone CnCirC12
          Length = 495

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 155 aacatgattgtggatcatcatgtt 178
           ||||||||||||||||||||||||
Sbjct: 316 aacatgattgtggatcatcatgtt 339
to top
>gb|AC069421.9| Homo sapiens 3 BAC RP11-528A4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 157289

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 37     acatttaacctttgatttttgttttt 62
              |||||||||||||| |||||||||||
Sbjct: 114507 acatttaacctttgttttttgttttt 114482
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 360     ctcgcccggcctcgtccagggc 381
               ||||||||||||||||||||||
Sbjct: 2495863 ctcgcccggcctcgtccagggc 2495884



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    cggcctcgtccagggccttc 385
              ||||||||||||||||||||
Sbjct: 819191 cggcctcgtccagggccttc 819210
to top
>gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome 13, complete sequence
          Length = 199707

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 156    acatgattgtggatcatcatgt 177
              ||||||||||||||||||||||
Sbjct: 131278 acatgattgtggatcatcatgt 131299
to top
>gb|AC127361.4| Mus musculus BAC clone RP23-125M8 from chromosome 17, complete sequence
          Length = 201331

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 45     cctttgatttttgtttttacagttg 69
              ||||| |||||||||||||||||||
Sbjct: 184960 ccttttatttttgtttttacagttg 184936
to top
>gb|AC124716.4| Mus musculus BAC clone RP24-144K17 from chromosome 19, complete
             sequence
          Length = 194362

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    cctttgatttttgtttttaca 65
             |||||||||||||||||||||
Sbjct: 60700 cctttgatttttgtttttaca 60720
to top
>emb|AL445587.10| Human DNA sequence from clone RP11-429D3 on chromosome 9 Contains part
             of a novel gene (LOC158135) and a CpG island, complete
             sequence
          Length = 173062

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 432   ggactggctcaaggctccatcaggg 456
             ||||||||||||||||||| |||||
Sbjct: 55021 ggactggctcaaggctccaacaggg 54997
to top
>emb|BX294659.9| Zebrafish DNA sequence from clone DKEYP-15D12 in linkage group 12,
             complete sequence
          Length = 171920

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 37    acatttaacctttgatttttgtttt 61
             ||||||||| |||||||||||||||
Sbjct: 64383 acatttaacttttgatttttgtttt 64359
to top
>emb|AL672230.6| Mouse DNA sequence from clone RP23-56L5 on chromosome X, complete
             sequence
          Length = 226781

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 45    cctttgatttttgtttttacagttg 69
             ||||| |||||||||||||||||||
Sbjct: 97408 ccttttatttttgtttttacagttg 97384
to top
>emb|AL929003.17| Zebrafish DNA sequence from clone DKEY-235D18 in linkage group 20,
              complete sequence
          Length = 175099

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 48     ttgatttttgtttttacagtt 68
              |||||||||||||||||||||
Sbjct: 167450 ttgatttttgtttttacagtt 167470
to top
>gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, complete sequence
          Length = 197585

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 408  acagctttgtctgctgaggag 428
            |||||||||||||||||||||
Sbjct: 8308 acagctttgtctgctgaggag 8288
to top
>gb|AC142112.3| Mus musculus BAC clone RP24-87H1 from 12, complete sequence
          Length = 229085

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 408    acagctttgtctgctgaggag 428
              |||||||||||||||||||||
Sbjct: 224259 acagctttgtctgctgaggag 224239
to top
>gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, complete sequence
          Length = 228741

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 408  acagctttgtctgctgaggag 428
            |||||||||||||||||||||
Sbjct: 1463 acagctttgtctgctgaggag 1443
to top
>ref|XM_510008.1| PREDICTED: Pan troglodytes similar to MAX protein isoform a;
            myc-associated factor X; helix-loop-helix zipper protein
            (LOC452972), mRNA
          Length = 3374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 3116 tgcccaggtggcctcctggc 3135
to top
>gb|AC099629.6| Mus musculus chromosome 15, clone RP24-86K17, complete sequence
          Length = 175809

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   tgttggagatgcccaggtgg 334
             ||||||||||||||||||||
Sbjct: 53894 tgttggagatgcccaggtgg 53875
to top
>gb|AC002453.1| Homo sapiens BAC clone GS1-440B14 from 7, complete sequence
          Length = 70319

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    atttaacctttgatttttgttttt 62
             |||| |||||||||||||||||||
Sbjct: 55744 attttacctttgatttttgttttt 55767
to top
>gb|AC132451.3| Mus musculus BAC clone RP23-194C20 from chromosome 8, complete sequence
          Length = 188539

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     taacctttgatttttgtttt 61
              ||||||||||||||||||||
Sbjct: 128002 taacctttgatttttgtttt 127983
to top
>emb|X66867.1|HSMAXG H.sapiens max gene
          Length = 3189

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 2208 tgcccaggtggcctcctggc 2227
to top
>ref|NM_145112.1| Homo sapiens MYC associated factor X (MAX), transcript variant 2,
            mRNA
          Length = 2041

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 1009 tgcccaggtggcctcctggc 1028
to top
>ref|NM_002382.3| Homo sapiens MYC associated factor X (MAX), transcript variant 1,
            mRNA
          Length = 2068

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 1036 tgcccaggtggcctcctggc 1055
to top
>ref|NM_145113.1| Homo sapiens MYC associated factor X (MAX), transcript variant 3,
            mRNA
          Length = 2169

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 1137 tgcccaggtggcctcctggc 1156
to top
>emb|AL683834.9| Human DNA sequence from clone RP11-159F17 on chromosome 10 Contains
             part of the GRID1 gene for glutamate receptor (ionotropic)
             delta 1, complete sequence
          Length = 106580

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   ctccccgatggcgtgccagg 245
             ||||||||||||||||||||
Sbjct: 76593 ctccccgatggcgtgccagg 76612
to top
>gb|AC115509.5| Rattus norvegicus 2 BAC CH230-382P14 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 191869

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     aaggacctgacatttaacctttga 51
              |||||||||| |||||||||||||
Sbjct: 149432 aaggacctgaaatttaacctttga 149455
to top
>gb|AC154784.2| Mus musculus BAC clone RP23-90B4 from chromosome 9, complete sequence
          Length = 176753

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     atttttgtttttacagttga 70
              ||||||||||||||||||||
Sbjct: 161821 atttttgtttttacagttga 161840
to top
>gb|BC036092.1| Homo sapiens MYC associated factor X, mRNA (cDNA clone MGC:33818
            IMAGE:5299106), complete cds
          Length = 3171

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 2266 tgcccaggtggcctcctggc 2285
to top
>emb|CR619150.1| full-length cDNA clone CS0DI059YB06 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1673

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 tgcccaggtggcctcctggc 343
           ||||||||||||||||||||
Sbjct: 738 tgcccaggtggcctcctggc 757
to top
>emb|CR607503.1| full-length cDNA clone CS0DB009YH16 of Neuroblastoma Cot
            10-normalized of Homo sapiens (human)
          Length = 1867

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 1004 tgcccaggtggcctcctggc 1023
to top
>emb|CR600362.1| full-length cDNA clone CS0DF013YF21 of Fetal brain of Homo sapiens
           (human)
          Length = 1695

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 tgcccaggtggcctcctggc 343
           ||||||||||||||||||||
Sbjct: 866 tgcccaggtggcctcctggc 885
to top
>gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gene cluster, complete
            sequence
          Length = 19112

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  cccatcagcccgagcgcctc 228
            ||||||||||||||||||||
Sbjct: 2144 cccatcagcccgagcgcctc 2163
to top
>gb|AC012157.21| Homo sapiens 12 BAC RP11-493P1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165833

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    ctgttggagatgcccaggtg 333
              ||||||||||||||||||||
Sbjct: 103174 ctgttggagatgcccaggtg 103193
to top
>gb|AC007912.6|AC007912 Homo sapiens chromosome , clone RP11-8A1, complete sequence
          Length = 171255

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  ctgttggagatgcccaggtg 333
            ||||||||||||||||||||
Sbjct: 3591 ctgttggagatgcccaggtg 3572
to top
>emb|BX294657.11| Zebrafish DNA sequence from clone DKEY-21K18 in linkage group 19,
            complete sequence
          Length = 124224

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   acctttgatttttgttttta 63
            ||||||||||||||||||||
Sbjct: 1451 acctttgatttttgttttta 1432
to top
>gb|BC025685.1| Homo sapiens MYC associated factor X, transcript variant 2, mRNA
            (cDNA clone MGC:36767 IMAGE:5205305), complete cds
          Length = 2023

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 991  tgcccaggtggcctcctggc 1010
to top
>gb|BC004516.2| Homo sapiens MYC associated factor X, transcript variant 1, mRNA
            (cDNA clone MGC:11225 IMAGE:3937573), complete cds
          Length = 1566

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 997  tgcccaggtggcctcctggc 1016
to top
>gb|BC003525.1| Homo sapiens MYC associated factor X, transcript variant 2, mRNA
           (cDNA clone MGC:10775 IMAGE:3607261), complete cds
          Length = 1963

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 tgcccaggtggcctcctggc 343
           ||||||||||||||||||||
Sbjct: 955 tgcccaggtggcctcctggc 974
to top
>emb|AL139022.4|CNS01DX4 Human chromosome 14 DNA sequence BAC R-840I19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190517

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   tgcccaggtggcctcctggc 343
             ||||||||||||||||||||
Sbjct: 30090 tgcccaggtggcctcctggc 30109
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     gcggcgagcgaagcggaggc 267
               ||||||||||||||||||||
Sbjct: 1231581 gcggcgagcgaagcggaggc 1231600
to top
>emb|AL833643.1|HSM804956 Homo sapiens mRNA; cDNA DKFZp686O0679 (from clone DKFZp686O0679)
          Length = 2116

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 1132 tgcccaggtggcctcctggc 1151
to top
>gb|BC027924.1| Homo sapiens MYC associated factor X, mRNA (cDNA clone MGC:34679
            IMAGE:5309524), complete cds
          Length = 1982

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tgcccaggtggcctcctggc 343
            ||||||||||||||||||||
Sbjct: 1001 tgcccaggtggcctcctggc 1020
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 365     ccggcctcgtccagggcctt 384
               ||||||||||||||||||||
Sbjct: 1367373 ccggcctcgtccagggcctt 1367354
to top
>gb|AC154519.2| Mus musculus BAC clone RP23-216L13 from chromosome 9, complete sequence
          Length = 209719

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     atttttgtttttacagttga 70
              ||||||||||||||||||||
Sbjct: 151117 atttttgtttttacagttga 151098
to top
>emb|AL832393.1|HSM803701 Homo sapiens mRNA; cDNA DKFZp667K1712 (from clone DKFZp667K1712)
          Length = 3383

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 39  atttaacctttgatttttgttttt 62
           |||| |||||||||||||||||||
Sbjct: 221 attttacctttgatttttgttttt 244


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,997,176
Number of Sequences: 3902068
Number of extensions: 4997176
Number of successful extensions: 99594
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99265
Number of HSP's gapped (non-prelim): 327
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top