ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet70d02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108989.1| Zea mays PCO108745 mRNA sequence Length = 625 Score = 266 bits (134), Expect = 6e-68 Identities = 253/292 (86%), Gaps = 3/292 (1%) Strand = Plus / Plus Query: 177 ggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggaggtcctgcat 236 |||||||||||||||| |||| ||||||||| || |||||||| ||||| ||| || | Sbjct: 295 ggtctcgtcgatgggcgacaccctgggcacgtggatggggagcacgtggacctccggcgt 354 Query: 237 ccacgggtt---ctcgccggcgtcgtcgacggtacgcagcgccctccagacggcgctgtt 293 ||||||||| ||| || | |||| || || || |||||| |||||||||||||||| Sbjct: 355 ccacgggttgccctcctcgctggcgtccaccgtgcggagcgccttccagacggcgctgtt 414 Query: 294 gcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttcttgatccggcg 353 ||| |||||||| |||||||| |||||||||||||||||||| |||||| ||| |||| Sbjct: 415 gcacttgaagccggagccgaaggcgatctgccagacgcggtcgcccttccggatgcggcc 474 Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 475 cttggcctcgcagtaggcgagctcgtaccagagcgagctgctggaggtgttgccgaagcg 534 Query: 414 gtagagcgtcatccgggagggctccatgtgccagggggtgagcttgaggctg 465 | ||||||||||||| ||||||||||||||||||| | |||||||||||||| Sbjct: 535 gcagagcgtcatccgcgagggctccatgtgccaggcgctgagcttgaggctg 586
>ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative beta-ketoacyl-CoA synthase (OSJNBa0032I20.8), mRNA Length = 1572 Score = 198 bits (100), Expect = 1e-47 Identities = 181/208 (87%) Strand = Plus / Minus Query: 257 cgtcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatg 316 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 1459 cgtcgacggtgcgcagcgccctccacacggcgctgttgcacttgaacccggagccgaagg 1400 Query: 317 cgatctgccagacgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagct 376 |||||||||| || ||||| || |||||||| | ||||||||||||||| ||||||| Sbjct: 1399 cgatctgccacacccggtcgccgcgcttgatcctccccttggcctcgcagtaggcgagct 1340 Query: 377 cgtaccagagggagctgctggaggtgttgccgaacctgtagagcgtcatccgggagggct 436 ||||||| || ||||||||||| ||||||||||| | ||||||||||||||| || |||| Sbjct: 1339 cgtaccacagcgagctgctggacgtgttgccgaagcggtagagcgtcatccgcgacggct 1280 Query: 437 ccatgtgccagggggtgagcttgaggct 464 |||||| ||| || | |||||||||||| Sbjct: 1279 ccatgtcccacggcgagagcttgaggct 1252 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 169 tggtaagaggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggagg 228 ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || | Sbjct: 1559 tggtaggaggtctcatcgatgggcgccaccttgggcacgtcgacggggagcatgtccacc 1500 Query: 229 tcctgcatccacgggttctcgccggcgtcg 258 |||| |||||||||||| |||||||||||| Sbjct: 1499 tccttcatccacgggttgtcgccggcgtcg 1470
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 198 bits (100), Expect = 1e-47 Identities = 181/208 (87%) Strand = Plus / Plus Query: 257 cgtcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatg 316 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 14046760 cgtcgacggtgcgcagcgccctccacacggcgctgttgcacttgaacccggagccgaagg 14046819 Query: 317 cgatctgccagacgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagct 376 |||||||||| || ||||| || |||||||| | ||||||||||||||| ||||||| Sbjct: 14046820 cgatctgccacacccggtcgccgcgcttgatcctccccttggcctcgcagtaggcgagct 14046879 Query: 377 cgtaccagagggagctgctggaggtgttgccgaacctgtagagcgtcatccgggagggct 436 ||||||| || ||||||||||| ||||||||||| | ||||||||||||||| || |||| Sbjct: 14046880 cgtaccacagcgagctgctggacgtgttgccgaagcggtagagcgtcatccgcgacggct 14046939 Query: 437 ccatgtgccagggggtgagcttgaggct 464 |||||| ||| || | |||||||||||| Sbjct: 14046940 ccatgtcccacggcgagagcttgaggct 14046967 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 169 tggtaagaggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggagg 228 ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || | Sbjct: 14046660 tggtaggaggtctcatcgatgggcgccaccttgggcacgtcgacggggagcatgtccacc 14046719 Query: 229 tcctgcatccacgggttctcgccggcgtcg 258 |||| |||||||||||| |||||||||||| Sbjct: 14046720 tccttcatccacgggttgtcgccggcgtcg 14046749 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 11266872 ccagacggcgctgttgcacttgaagcctgagccgaagccgatctgccagacacggt 11266927 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 3639004 ccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcggt 3639059 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 355 ttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacctg 414 ||||||||| ||| ||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 3639080 ttggcctcggcgtaggcgagctcgtaccagagcgagctgctgctggtgttcccgaacctg 3639139 Query: 415 t 415 | Sbjct: 3639140 t 3639140
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 198 bits (100), Expect = 1e-47 Identities = 181/208 (87%) Strand = Plus / Plus Query: 257 cgtcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatg 316 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 62889 cgtcgacggtgcgcagcgccctccacacggcgctgttgcacttgaacccggagccgaagg 62948 Query: 317 cgatctgccagacgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagct 376 |||||||||| || ||||| || |||||||| | ||||||||||||||| ||||||| Sbjct: 62949 cgatctgccacacccggtcgccgcgcttgatcctccccttggcctcgcagtaggcgagct 63008 Query: 377 cgtaccagagggagctgctggaggtgttgccgaacctgtagagcgtcatccgggagggct 436 ||||||| || ||||||||||| ||||||||||| | ||||||||||||||| || |||| Sbjct: 63009 cgtaccacagcgagctgctggacgtgttgccgaagcggtagagcgtcatccgcgacggct 63068 Query: 437 ccatgtgccagggggtgagcttgaggct 464 |||||| ||| || | |||||||||||| Sbjct: 63069 ccatgtcccacggcgagagcttgaggct 63096 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 169 tggtaagaggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggagg 228 ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || | Sbjct: 62789 tggtaggaggtctcatcgatgggcgccaccttgggcacgtcgacggggagcatgtccacc 62848 Query: 229 tcctgcatccacgggttctcgccggcgtcg 258 |||| |||||||||||| |||||||||||| Sbjct: 62849 tccttcatccacgggttgtcgccggcgtcg 62878
>dbj|AK073016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L14, full insert sequence Length = 1040 Score = 198 bits (100), Expect = 1e-47 Identities = 181/208 (87%) Strand = Plus / Minus Query: 257 cgtcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatg 316 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 731 cgtcgacggtgcgcagcgccctccacacggcgctgttgcacttgaacccggagccgaagg 672 Query: 317 cgatctgccagacgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagct 376 |||||||||| || ||||| || |||||||| | ||||||||||||||| ||||||| Sbjct: 671 cgatctgccacacccggtcgccgcgcttgatcctccccttggcctcgcagtaggcgagct 612 Query: 377 cgtaccagagggagctgctggaggtgttgccgaacctgtagagcgtcatccgggagggct 436 ||||||| || ||||||||||| ||||||||||| | ||||||||||||||| || |||| Sbjct: 611 cgtaccacagcgagctgctggacgtgttgccgaagcggtagagcgtcatccgcgacggct 552 Query: 437 ccatgtgccagggggtgagcttgaggct 464 |||||| ||| || | |||||||||||| Sbjct: 551 ccatgtcccacggcgagagcttgaggct 524 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 169 tggtaagaggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggagg 228 ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || | Sbjct: 831 tggtaggaggtctcatcgatgggcgccaccttgggcacgtcgacggggagcatgtccacc 772 Query: 229 tcctgcatccacgggttctcgccggcgtcg 258 |||| |||||||||||| |||||||||||| Sbjct: 771 tccttcatccacgggttgtcgccggcgtcg 742
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 198 bits (100), Expect = 1e-47 Identities = 181/208 (87%) Strand = Plus / Plus Query: 257 cgtcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatg 316 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 14055002 cgtcgacggtgcgcagcgccctccacacggcgctgttgcacttgaacccggagccgaagg 14055061 Query: 317 cgatctgccagacgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagct 376 |||||||||| || ||||| || |||||||| | ||||||||||||||| ||||||| Sbjct: 14055062 cgatctgccacacccggtcgccgcgcttgatcctccccttggcctcgcagtaggcgagct 14055121 Query: 377 cgtaccagagggagctgctggaggtgttgccgaacctgtagagcgtcatccgggagggct 436 ||||||| || ||||||||||| ||||||||||| | ||||||||||||||| || |||| Sbjct: 14055122 cgtaccacagcgagctgctggacgtgttgccgaagcggtagagcgtcatccgcgacggct 14055181 Query: 437 ccatgtgccagggggtgagcttgaggct 464 |||||| ||| || | |||||||||||| Sbjct: 14055182 ccatgtcccacggcgagagcttgaggct 14055209 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 169 tggtaagaggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggagg 228 ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || | Sbjct: 14054902 tggtaggaggtctcatcgatgggcgccaccttgggcacgtcgacggggagcatgtccacc 14054961 Query: 229 tcctgcatccacgggttctcgccggcgtcg 258 |||| |||||||||||| |||||||||||| Sbjct: 14054962 tccttcatccacgggttgtcgccggcgtcg 14054991 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 11273312 ccagacggcgctgttgcacttgaagcctgagccgaagccgatctgccagacacggt 11273367 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 3638925 ccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcggt 3638980 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 355 ttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacctg 414 ||||||||| ||| ||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 3639001 ttggcctcggcgtaggcgagctcgtaccagagcgagctgctgctggtgttcccgaacctg 3639060 Query: 415 t 415 | Sbjct: 3639061 t 3639061
>ref|XM_475915.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 161 bits (81), Expect = 2e-36 Identities = 153/177 (86%) Strand = Plus / Minus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 1463 agcgccctccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccacgtc 1404 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 | ||| |||||||||||||| | |||||||||| ||| |||||||||||||| || ||| Sbjct: 1403 ctgtcccccttcttgatccgccccttggcctcggcgtaggcgagctcgtaccacagcgag 1344 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgccag 447 ||||| || ||||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 1343 ctgctcgacgtgttcccgaacctgtgcagcgtcatccgcgacggctccatgtgccag 1287
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 161 bits (81), Expect = 2e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 40133 agcgccctccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccacgtc 40192 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 | ||| |||||||||||||| | |||||||||| ||| |||||||||||||| || ||| Sbjct: 40193 ctgtcccccttcttgatccgccccttggcctcggcgtaggcgagctcgtaccacagcgag 40252 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgccag 447 ||||| || ||||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 40253 ctgctcgacgtgttcccgaacctgtgcagcgtcatccgcgacggctccatgtgccag 40309
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 161 bits (81), Expect = 2e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 28405209 agcgccctccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccacgtc 28405268 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 | ||| |||||||||||||| | |||||||||| ||| |||||||||||||| || ||| Sbjct: 28405269 ctgtcccccttcttgatccgccccttggcctcggcgtaggcgagctcgtaccacagcgag 28405328 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgccag 447 ||||| || ||||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 28405329 ctgctcgacgtgttcccgaacctgtgcagcgtcatccgcgacggctccatgtgccag 28405385 Score = 77.8 bits (39), Expect = 3e-11 Identities = 120/147 (81%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 338 |||||||||||||||||| ||||| || |||||| ||||||||||||| ||||| || Sbjct: 28059211 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgccagatgcggtggcc 28059270 Query: 339 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 398 || ||||| ||||||||| ||| |||||||||||||||| ||||||||| || Sbjct: 28059271 gcggcggacccggcccttggcctccatgtaggcgagctcgtaccagatggagctgctcga 28059330 Query: 399 ggtgttgccgaacctgtagagcgtcat 425 ||||||||||| | || ||||||||| Sbjct: 28059331 cgtgttgccgaagcggtggagcgtcat 28059357 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||| |||| |||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 22008140 ccagtcggcactgttgcacttgaagcctgagccgaagccgatctgccagacacggt 22008195
>dbj|AK070754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067B12, full insert sequence Length = 2233 Score = 161 bits (81), Expect = 2e-36 Identities = 153/177 (86%) Strand = Plus / Minus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 1922 agcgccctccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccacgtc 1863 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 | ||| |||||||||||||| | |||||||||| ||| |||||||||||||| || ||| Sbjct: 1862 ctgtcccccttcttgatccgccccttggcctcggcgtaggcgagctcgtaccacagcgag 1803 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgccag 447 ||||| || ||||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 1802 ctgctcgacgtgttcccgaacctgtgcagcgtcatccgcgacggctccatgtgccag 1746
>ref|NM_187760.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 135 bits (68), Expect = 1e-28 Identities = 149/176 (84%) Strand = Plus / Minus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 |||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 1406 agcgccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacc 1347 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 ||||| || | |||||| | || ||||||||||| | ||||||||||| || ||| Sbjct: 1346 cggtcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgag 1287 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgcca 446 ||||| || ||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 1286 ctgctcgacgtgttcccgaacctgtagagcgtcatccgcgacggctccatgtgcca 1231 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 185 cgatgggcaccaccttgggcacgt 208 |||||||||||||||||||||||| Sbjct: 1501 cgatgggcaccaccttgggcacgt 1478
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 135 bits (68), Expect = 1e-28 Identities = 149/176 (84%) Strand = Plus / Minus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 |||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 3388440 agcgccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacc 3388381 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 ||||| || | |||||| | || ||||||||||| | ||||||||||| || ||| Sbjct: 3388380 cggtcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgag 3388321 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgcca 446 ||||| || ||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 3388320 ctgctcgacgtgttcccgaacctgtagagcgtcatccgcgacggctccatgtgcca 3388265 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 6271549 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaaccg 6271608 Query: 414 gtagagcgtcatccgggagggctccatgtgc 444 || |||||||| ||||| | ||||| |||| Sbjct: 6271609 gtgcagcgtcatgcgggacgcctccacgtgc 6271639 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 338 |||||| ||||||||||| ||||| || |||||||| |||||||||| ||||||| || Sbjct: 7656824 ccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcggttgcc 7656883 Query: 339 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 398 || || |||| |||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 7656884 gcgctggacgcggcccttggcctcggcgtacgccagctcgtaccacagcgagctgctgct 7656943 Query: 399 ggtgttgccgaacc 412 |||||||||||||| Sbjct: 7656944 ggtgttgccgaacc 7656957 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 278 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 6271473 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 6271530 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 283 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 4253136 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 4253084 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 185 cgatgggcaccaccttgggcacgt 208 |||||||||||||||||||||||| Sbjct: 3388535 cgatgggcaccaccttgggcacgt 3388512
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 135 bits (68), Expect = 1e-28 Identities = 149/176 (84%) Strand = Plus / Plus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 |||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 40774 agcgccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacc 40833 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 ||||| || | |||||| | || ||||||||||| | ||||||||||| || ||| Sbjct: 40834 cggtcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgag 40893 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgcca 446 ||||| || ||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 40894 ctgctcgacgtgttcccgaacctgtagagcgtcatccgcgacggctccatgtgcca 40949 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 185 cgatgggcaccaccttgggcacgt 208 |||||||||||||||||||||||| Sbjct: 40679 cgatgggcaccaccttgggcacgt 40702
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 135 bits (68), Expect = 1e-28 Identities = 149/176 (84%) Strand = Plus / Minus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 |||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 3388551 agcgccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacc 3388492 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 ||||| || | |||||| | || ||||||||||| | ||||||||||| || ||| Sbjct: 3388491 cggtcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgag 3388432 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgcca 446 ||||| || ||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 3388431 ctgctcgacgtgttcccgaacctgtagagcgtcatccgcgacggctccatgtgcca 3388376 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 6270762 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaaccg 6270821 Query: 414 gtagagcgtcatccgggagggctccatgtgc 444 || |||||||| ||||| | ||||| |||| Sbjct: 6270822 gtgcagcgtcatgcgggacgcctccacgtgc 6270852 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 338 |||||| ||||||||||| ||||| || |||||||| |||||||||| ||||||| || Sbjct: 7654659 ccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcggttgcc 7654718 Query: 339 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 398 || || |||| |||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 7654719 gcgctggacgcggcccttggcctcggcgtacgccagctcgtaccacagcgagctgctgct 7654778 Query: 399 ggtgttgccgaacc 412 |||||||||||||| Sbjct: 7654779 ggtgttgccgaacc 7654792 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 278 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 6270686 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 6270743 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 283 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 4253251 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 4253199 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 185 cgatgggcaccaccttgggcacgt 208 |||||||||||||||||||||||| Sbjct: 3388646 cgatgggcaccaccttgggcacgt 3388623
>dbj|AK064127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E01, full insert sequence Length = 1408 Score = 135 bits (68), Expect = 1e-28 Identities = 149/176 (84%) Strand = Plus / Minus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 |||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 974 agcgccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacc 915 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 ||||| || | |||||| | || ||||||||||| | ||||||||||| || ||| Sbjct: 914 cggtcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgag 855 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgcca 446 ||||| || ||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 854 ctgctcgacgtgttcccgaacctgtagagcgtcatccgcgacggctccatgtgcca 799 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 185 cgatgggcaccaccttgggcacgt 208 |||||||||||||||||||||||| Sbjct: 1069 cgatgggcaccaccttgggcacgt 1046
>gb|AY110123.1| Zea mays CL29782_1 mRNA sequence Length = 932 Score = 125 bits (63), Expect = 1e-25 Identities = 112/130 (86%) Strand = Plus / Plus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 |||||| ||||||||||||||||||| |||||||| |||||||| ||||||||||| || Sbjct: 252 agcgccttccagacggcgctgttgcacttgaagccggagccgaaagcgatctgccatacc 311 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 |||| || |||||| | ||||||||||||||| ||||||||||||||||| ||| Sbjct: 312 cggtnnnnnttgcggatccgtcccttggcctcgcagtaggcgagctcgtaccagagcgag 371 Query: 391 ctgctggagg 400 |||||||||| Sbjct: 372 ctgctggagg 381 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 417 gagcgtcatccgggagggctccatgtgccagggggtgagcttgaggctg 465 ||||||||||| |||||||||||||||||||| | |||| ||||||||| Sbjct: 398 gagcgtcatcctggagggctccatgtgccaggcgctgaggttgaggctg 446 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 177 ggtctcgtcgatgggcaccaccttgggcacgtcgacggggagca 220 |||||| ||||||||| ||||||||||||| || |||||||| Sbjct: 155 ggtctcatcgatgggcgaaaccttgggcacgtggatggggagca 198
>ref|XM_467628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1458 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Minus Query: 284 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 343 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| ||||| Sbjct: 1360 cggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtcgcccttgc 1301 Query: 344 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 403 || |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||| Sbjct: 1300 gcatgcggcccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgt 1241 Query: 404 tgccgaacctgtagagcgtcatccggga 431 ||||||||| || ||||||||| ||||| Sbjct: 1240 tgccgaaccggtggagcgtcatgcggga 1213
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Minus Query: 284 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 343 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| ||||| Sbjct: 30520192 cggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtcgcccttgc 30520133 Query: 344 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 403 || |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||| Sbjct: 30520132 gcatgcggcccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgt 30520073 Query: 404 tgccgaacctgtagagcgtcatccggga 431 ||||||||| || ||||||||| ||||| Sbjct: 30520072 tgccgaaccggtggagcgtcatgcggga 30520045 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgcca 326 ||||||||||| || ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 5930662 agcgccctccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgcca 5930717 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 407 cgaacctgtagagcgtcatccgggagggctccatgtgcca 446 |||||||||| ||||||||||| || |||||||| ||||| Sbjct: 5931037 cgaacctgtacagcgtcatccgtgacggctccatctgcca 5931076
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Minus Query: 284 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 343 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| ||||| Sbjct: 32200 cggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtcgcccttgc 32141 Query: 344 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 403 || |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||| Sbjct: 32140 gcatgcggcccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgt 32081 Query: 404 tgccgaacctgtagagcgtcatccggga 431 ||||||||| || ||||||||| ||||| Sbjct: 32080 tgccgaaccggtggagcgtcatgcggga 32053
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Minus Query: 284 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 343 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| ||||| Sbjct: 126240 cggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtcgcccttgc 126181 Query: 344 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 403 || |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||| Sbjct: 126180 gcatgcggcccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgt 126121 Query: 404 tgccgaacctgtagagcgtcatccggga 431 ||||||||| || ||||||||| ||||| Sbjct: 126120 tgccgaaccggtggagcgtcatgcggga 126093
>emb|AJ292770.1|ZMA292770 Zea mays mRNA for putative fatty acid longase (fae2 gene) Length = 2018 Score = 107 bits (54), Expect = 3e-20 Identities = 141/170 (82%) Strand = Plus / Minus Query: 278 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctc 337 ||||||||||||||||||| ||||| || || || |||||||||||||||| | ||| | Sbjct: 1585 tccagacggcgctgttgcacttgaatccagaaccaaatgcgatctgccagatcctgtcgc 1526 Query: 338 ccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgg 397 |||| |||||| | ||| ||||| ||| || |||||||||||||| |||||||| | Sbjct: 1525 gcttcctgatcctaccctttgcctcagtgtacgccagctcgtaccagagtgagctgcttg 1466 Query: 398 aggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgccag 447 | |||||||| |||||||| || ||||||| || ||||||||||||||| Sbjct: 1465 atgtgttgccaaacctgtacagggtcatcctcgatggctccatgtgccag 1416
>gb|AY109713.2| Zea mays CL1191_1 mRNA sequence Length = 1949 Score = 107 bits (54), Expect = 3e-20 Identities = 141/170 (82%) Strand = Plus / Minus Query: 278 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctc 337 ||||||||||||||||||| ||||| || || || |||||||||||||||| | ||| | Sbjct: 1553 tccagacggcgctgttgcacttgaatccagaaccaaatgcgatctgccagatcctgtcgc 1494 Query: 338 ccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgg 397 |||| |||||| | ||| ||||| ||| || |||||||||||||| |||||||| | Sbjct: 1493 gcttcctgatcctaccctttgcctcagtgtacgccagctcgtaccagagtgagctgcttg 1434 Query: 398 aggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgccag 447 | |||||||| |||||||| || ||||||| || ||||||||||||||| Sbjct: 1433 atgtgttgccaaacctgtacagggtcatcctcgatggctccatgtgccag 1384
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 349 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 408 |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 138256 cggcccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgccc 138315 Query: 409 aacctgtagagcgtcatccgggagggctccatgtgccagg 448 ||| ||||||||||||||| || |||||||||||||||| Sbjct: 138316 caccggtagagcgtcatccgcgacggctccatgtgccagg 138355 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 259 tcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcg 318 |||||||| || ||||||||||| |||||||||||||| ||||| || |||||||| ||| Sbjct: 138166 tcgacggtgcggagcgccctccacacggcgctgttgcacttgaacccggagccgaacgcg 138225 Query: 319 atctgcca 326 |||||||| Sbjct: 138226 atctgcca 138233 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 ccaccttgggcacgtcgacgggga 217 ||||||||||||| |||||||||| Sbjct: 138095 ccaccttgggcacctcgacgggga 138118
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 349 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 408 |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 21614737 cggcccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgccc 21614796 Query: 409 aacctgtagagcgtcatccgggagggctccatgtgccagg 448 ||| ||||||||||||||| || |||||||||||||||| Sbjct: 21614797 caccggtagagcgtcatccgcgacggctccatgtgccagg 21614836 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 259 tcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcg 318 |||||||| || ||||||||||| |||||||||||||| ||||| || |||||||| ||| Sbjct: 21614647 tcgacggtgcggagcgccctccacacggcgctgttgcacttgaacccggagccgaacgcg 21614706 Query: 319 atctgcca 326 |||||||| Sbjct: 21614707 atctgcca 21614714 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 ccaccttgggcacgtcgacgggga 217 ||||||||||||| |||||||||| Sbjct: 21614576 ccaccttgggcacctcgacgggga 21614599 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 agaggtagctagctagcaag 140 |||||||||||||||||||| Sbjct: 655504 agaggtagctagctagcaag 655485
>dbj|AK120567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134A09, full insert sequence Length = 1536 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 349 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 408 |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 1112 cggcccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgccc 1053 Query: 409 aacctgtagagcgtcatccgggagggctccatgtgccagg 448 ||| ||||||||||||||| || |||||||||||||||| Sbjct: 1052 caccggtagagcgtcatccgcgacggctccatgtgccagg 1013 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 259 tcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcg 318 |||||||| || ||||||||||| |||||||||||||| ||||| || |||||||| ||| Sbjct: 1202 tcgacggtgcggagcgccctccacacggcgctgttgcacttgaacccggagccgaacgcg 1143 Query: 319 atctgcca 326 |||||||| Sbjct: 1142 atctgcca 1135 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 ccaccttgggcacgtcgacgggga 217 ||||||||||||| |||||||||| Sbjct: 1273 ccaccttgggcacctcgacgggga 1250
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 349 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 408 |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 21924936 cggcccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgccc 21924995 Query: 409 aacctgtagagcgtcatccgggagggctccatgtgccagg 448 ||| ||||||||||||||| || |||||||||||||||| Sbjct: 21924996 caccggtagagcgtcatccgcgacggctccatgtgccagg 21925035 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 259 tcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcg 318 |||||||| || ||||||||||| |||||||||||||| ||||| || |||||||| ||| Sbjct: 21924846 tcgacggtgcggagcgccctccacacggcgctgttgcacttgaacccggagccgaacgcg 21924905 Query: 319 atctgcca 326 |||||||| Sbjct: 21924906 atctgcca 21924913 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 ccaccttgggcacgtcgacgggga 217 ||||||||||||| |||||||||| Sbjct: 21924775 ccaccttgggcacctcgacgggga 21924798 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 agaggtagctagctagcaag 140 |||||||||||||||||||| Sbjct: 655504 agaggtagctagctagcaag 655485
>gb|AY308830.1| Marchantia polymorpha FAE3 gene, complete cds Length = 10158 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 373 agctcgtaccagagggagctgctggaggtgttgccgaacctgtagagcgtcatccgggag 432 ||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||| Sbjct: 5468 agctcgtaccacagagagctgctggacgtgtttccgaacctgtagagagtcattcgggag 5409 Query: 433 ggctccatgtgcca 446 |||||||||||||| Sbjct: 5408 ggctccatgtgcca 5395
>gb|AY105739.1| Zea mays PCO084555 mRNA sequence Length = 962 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 349 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 408 |||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 338 cggcccttggcctccatgtaggcgagctcgtaccagatggagctgctggaggtgttgccg 279 Query: 409 aacctgtagagcgtcatccgggagggctccatgtgc 444 || | || ||||||||||||||| | ||||| |||| Sbjct: 278 aagcggtggagcgtcatccgggacgcctccacgtgc 243 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 283 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 404 acggcgctgttgcacttgaacccgctgccgaaggcgatctgccagacgcggt 353
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 269 gcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccaga 328 |||||||| ||||||| ||||||||||| ||||| || || || ||||| |||||||||| Sbjct: 23226975 gcagcgccttccagactgcgctgttgcacttgaaaccagatccaaatgcaatctgccaga 23226916 Query: 329 cgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagaggg 388 | ||| | |||| |||||| | ||| |||||| ||| || ||||| |||||||| | Sbjct: 23226915 tcctgtcccgcttcctgatcctccccttcgcctcggtgtacgccagctcataccagagtg 23226856 Query: 389 agctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgccag 447 ||||||| || |||||||| |||| ||| || ||||||| || ||||||||||||||| Sbjct: 23226855 agctgctcgatgtgttgccaaaccggtacagtgtcatcctagatggctccatgtgccag 23226797 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 |||||||||| ||| || ||||||||||| | |||||||| || ||||||||||||| Sbjct: 8656282 cttggcctcgacgtacgccagctcgtaccacaccgagctgctcgacgtgttgccgaaccg 8656341 Query: 414 gtagagcgtcatccg 428 || ||||| |||||| Sbjct: 8656342 gtggagcgccatccg 8656356 Score = 50.1 bits (25), Expect = 0.007 Identities = 103/129 (79%) Strand = Plus / Plus Query: 284 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 343 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| || Sbjct: 8419685 cggcgctgttgcacttgaagccggagccgaacccgatcatccacacgcggtcgccggggc 8419744 Query: 344 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 403 || |||| |||||||||| ||| || ||||||||||| | |||||||| || |||| Sbjct: 8419745 gcatgcggcccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgt 8419804 Query: 404 tgccgaacc 412 ||||||||| Sbjct: 8419805 tgccgaacc 8419813 Score = 48.1 bits (24), Expect = 0.026 Identities = 54/64 (84%) Strand = Plus / Minus Query: 349 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 408 |||| |||||||||| ||| || ||||||||||| | |||||||| || ||||||||| Sbjct: 8523443 cggcccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgttgccg 8523384 Query: 409 aacc 412 |||| Sbjct: 8523383 aacc 8523380
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 269 gcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccaga 328 |||||||| ||||||| ||||||||||| ||||| || || || ||||| |||||||||| Sbjct: 61737 gcagcgccttccagactgcgctgttgcacttgaaaccagatccaaatgcaatctgccaga 61678 Query: 329 cgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagaggg 388 | ||| | |||| |||||| | ||| |||||| ||| || ||||| |||||||| | Sbjct: 61677 tcctgtcccgcttcctgatcctccccttcgcctcggtgtacgccagctcataccagagtg 61618 Query: 389 agctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgccag 447 ||||||| || |||||||| |||| ||| || ||||||| || ||||||||||||||| Sbjct: 61617 agctgctcgatgtgttgccaaaccggtacagtgtcatcctagatggctccatgtgccag 61559
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 268 cgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccag 327 |||| |||| |||| ||||||||||| || ||||| || || || ||||||||||||||| Sbjct: 85478 cgcaccgccttccacacggcgctgttacacttgaaacccgacccaaatgcgatctgccag 85537 Query: 328 acgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagg 387 || ||||| || || || ||||| |||||| ||| ||| || ||||||||||||||| Sbjct: 85538 acccggtcccctttgccgacccggcccttggcttcggtgtaggcaagctcgtaccagagg 85597 Query: 388 gagctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgcca 446 ||||| || || ||||||||||| | || || |||||||| || || ||||||||||| Sbjct: 85598 gagctactagaagtgttgccgaaacggtgcagtgtcatccgagacggttccatgtgcca 85656
>ref|XM_464563.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1929 Score = 87.7 bits (44), Expect = 3e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 ||||||||||| || ||||||||||| ||||| || || ||||| ||||||||||| || Sbjct: 1565 agcgccctccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgccacacc 1506 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 | ||| | | || | | || | ||| ||||||| ||| || ||||||||||| || ||| Sbjct: 1505 ctgtccctcctcctcaccctccccttcgcctcgctgtacgccagctcgtaccacagcgag 1446 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgcca 446 ||||| || ||||| || |||||||| ||||||||||| || |||||||| ||||| Sbjct: 1445 ctgctcgacgtgttcccaaacctgtacagcgtcatccgtgacggctccatctgcca 1390
>dbj|AK067907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127I02, full insert sequence Length = 1929 Score = 87.7 bits (44), Expect = 3e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 330 ||||||||||| || ||||||||||| ||||| || || ||||| ||||||||||| || Sbjct: 1565 agcgccctccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgccacacc 1506 Query: 331 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 390 | ||| | | || | | || | ||| ||||||| ||| || ||||||||||| || ||| Sbjct: 1505 ctgtccctcctcctcaccctccccttcgcctcgctgtacgccagctcgtaccacagcgag 1446 Query: 391 ctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgcca 446 ||||| || ||||| || |||||||| ||||||||||| || |||||||| ||||| Sbjct: 1445 ctgctcgacgtgttcccaaacctgtacagcgtcatccgtgacggctccatctgcca 1390
>dbj|AK101377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036C04, full insert sequence Length = 2134 Score = 85.7 bits (43), Expect = 1e-13 Identities = 145/179 (81%) Strand = Plus / Minus Query: 269 gcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccaga 328 |||||||| ||||||| ||||||||||| ||||| || || || ||||| |||||||||| Sbjct: 1665 gcagcgccttccagactgcgctgttgcacttgaaaccagatccaaatgcaatctgccaga 1606 Query: 329 cgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagaggg 388 | ||| | |||| |||||| | ||| |||||| ||| || ||||| |||||||| | Sbjct: 1605 tcctgtcccgcttcctgatcctccccttcgcctcggtgtacgccagctcataccagagtg 1546 Query: 389 agctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgccag 447 ||||||| || || ||||| |||| ||| || ||||||| || ||||||||||||||| Sbjct: 1545 agctgctcgatgttttgccaaaccggtacagtgtcatcctagatggctccatgtgccag 1487
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 370 gcgagctcgtaccagagggagctgctggaggtgttgccgaacctgtagagcgtcatccgg 429 |||||||| ||||| || ||||||||||||||||| || ||| ||||||||||||||| Sbjct: 5318 gcgagctcataccacagcgagctgctggaggtgttcccccaccggtagagcgtcatccgt 5259 Query: 430 gagggctccatgtgcca 446 || |||||||||||||| Sbjct: 5258 gacggctccatgtgcca 5242
>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region Length = 90923 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 370 gcgagctcgtaccagagggagctgctggaggtgttgccgaacctgtagagcgtcatccgg 429 |||||||| ||||| || ||||||||||||||||| || ||| ||||||||||||||| Sbjct: 10329 gcgagctcataccacagcgagctgctggaggtgttcccccaccggtagagcgtcatccgt 10388 Query: 430 gagggctccatgtgcca 446 || |||||||||||||| Sbjct: 10389 gacggctccatgtgcca 10405
>ref|NM_194947.1| Oryza sativa (japonica cultivar-group) putative senescence-associated protein 15 (OSJNBa0036D19.6), mRNA Length = 1797 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 1476 ccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcggt 1421 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 355 ttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacctg 414 ||||||||| ||| ||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 1400 ttggcctcggcgtaggcgagctcgtaccagagcgagctgctgctggtgttcccgaacctg 1341 Query: 415 t 415 | Sbjct: 1340 t 1340
>ref|NM_196127.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1341F06.20), mRNA Length = 609 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 57 ccagacggcgctgttgcacttgaagcctgagccgaagccgatctgccagacacggt 112
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 74860 ccagacggcgctgttgcacttgaagcctgagccgaagccgatctgccagacacggt 74915
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 99583 ccagacggcgctgttgcacttgaagcctgagccgaagccgatctgccagacacggt 99528
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 71845 ccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcggt 71900 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 355 ttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacctg 414 ||||||||| ||| ||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 71921 ttggcctcggcgtaggcgagctcgtaccagagcgagctgctgctggtgttcccgaacctg 71980 Query: 415 t 415 | Sbjct: 71981 t 71981
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 77.8 bits (39), Expect = 3e-11 Identities = 120/147 (81%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 338 |||||||||||||||||| ||||| || |||||| ||||||||||||| ||||| || Sbjct: 139376 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgccagatgcggtggcc 139435 Query: 339 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 398 || ||||| ||||||||| ||| |||||||||||||||| ||||||||| || Sbjct: 139436 gcggcggacccggcccttggcctccatgtaggcgagctcgtaccagatggagctgctcga 139495 Query: 399 ggtgttgccgaacctgtagagcgtcat 425 ||||||||||| | || ||||||||| Sbjct: 139496 cgtgttgccgaagcggtggagcgtcat 139522
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 110160 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaaccg 110219 Query: 414 gtagagcgtcatccgggagggctccatgtgc 444 || |||||||| ||||| | ||||| |||| Sbjct: 110220 gtgcagcgtcatgcgggacgcctccacgtgc 110250 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 278 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 110084 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 110141
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 84757 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaaccg 84816 Query: 414 gtagagcgtcatccgggagggctccatgtgc 444 || |||||||| ||||| | ||||| |||| Sbjct: 84817 gtgcagcgtcatgcgggacgcctccacgtgc 84847 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 278 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 84681 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 84738
>dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D11, full insert sequence Length = 2378 Score = 77.8 bits (39), Expect = 3e-11 Identities = 120/147 (81%) Strand = Plus / Minus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 338 |||||||||||||||||| ||||| || |||||| ||||||||||||| ||||| || Sbjct: 1699 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgccagatgcggtggcc 1640 Query: 339 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 398 || ||||| ||||||||| ||| |||||||||||||||| ||||||||| || Sbjct: 1639 gcggcggacccggcccttggcctccatgtaggcgagctcgtaccagatggagctgctcga 1580 Query: 399 ggtgttgccgaacctgtagagcgtcat 425 ||||||||||| | || ||||||||| Sbjct: 1579 cgtgttgccgaagcggtggagcgtcat 1553
>dbj|AK106150.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H08, full insert sequence Length = 1892 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 1489 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaaccg 1430 Query: 414 gtagagcgtcatccgggagggctccatgtgc 444 || |||||||| ||||| | ||||| |||| Sbjct: 1429 gtgcagcgtcatgcgggacgcctccacgtgc 1399 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 278 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 1565 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 1508
>dbj|AK104714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H10, full insert sequence Length = 1892 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 1489 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaaccg 1430 Query: 414 gtagagcgtcatccgggagggctccatgtgc 444 || |||||||| ||||| | ||||| |||| Sbjct: 1429 gtgcagcgtcatgcgggacgcctccacgtgc 1399 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 278 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 1565 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 1508
>dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025C07, full insert sequence Length = 2356 Score = 77.8 bits (39), Expect = 3e-11 Identities = 120/147 (81%) Strand = Plus / Minus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 338 |||||||||||||||||| ||||| || |||||| ||||||||||||| ||||| || Sbjct: 1700 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgccagatgcggtggcc 1641 Query: 339 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 398 || ||||| ||||||||| ||| |||||||||||||||| ||||||||| || Sbjct: 1640 gcggcggacccggcccttggcctccatgtaggcgagctcgtaccagatggagctgctcga 1581 Query: 399 ggtgttgccgaacctgtagagcgtcat 425 ||||||||||| | || ||||||||| Sbjct: 1580 cgtgttgccgaagcggtggagcgtcat 1554
>dbj|AK066587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074H08, full insert sequence Length = 1966 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 1490 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaaccg 1431 Query: 414 gtagagcgtcatccgggagggctccatgtgc 444 || |||||||| ||||| | ||||| |||| Sbjct: 1430 gtgcagcgtcatgcgggacgcctccacgtgc 1400 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 278 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 1566 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 1509
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 338 |||||| ||||||||||| ||||| || |||||||| |||||||||| ||||||| || Sbjct: 58466 ccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcggttgcc 58407 Query: 339 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 398 || || |||| |||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 58406 gcgctggacgcggcccttggcctcggcgtacgccagctcgtaccacagcgagctgctgct 58347 Query: 399 ggtgttgccgaacc 412 |||||||||||||| Sbjct: 58346 ggtgttgccgaacc 58333
>dbj|AK119222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E03, full insert sequence Length = 2098 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 338 |||||| ||||||||||| ||||| || |||||||| |||||||||| ||||||| || Sbjct: 1616 ccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcggttgcc 1557 Query: 339 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 398 || || |||| |||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 1556 gcgctggacgcggcccttggcctcggcgtacgccagctcgtaccacagcgagctgctgct 1497 Query: 399 ggtgttgccgaacc 412 |||||||||||||| Sbjct: 1496 ggtgttgccgaacc 1483
>dbj|AK112059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A11, full insert sequence Length = 2025 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 338 |||||| ||||||||||| ||||| || |||||||| |||||||||| ||||||| || Sbjct: 1616 ccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcggttgcc 1557 Query: 339 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 398 || || |||| |||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 1556 gcgctggacgcggcccttggcctcggcgtacgccagctcgtaccacagcgagctgctgct 1497 Query: 399 ggtgttgccgaacc 412 |||||||||||||| Sbjct: 1496 ggtgttgccgaacc 1483
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 19951171 ccagacggtgctgttgcacttgaagcctgagccgaagctgatctgccagacgcggt 19951116
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 54080 ccagacggtgctgttgcacttgaagcctgagccgaagctgatctgccagacgcggt 54025
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01, complete sequence Length = 119525 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 279 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 334 |||| |||| |||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 56626 ccagtcggcactgttgcacttgaagcctgagccgaagccgatctgccagacacggt 56681
>gb|AY183914.1| Marchantia polymorpha beta-ketoacyl-CoA-synthase gene, complete cds Length = 9798 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 388 gagctgctggaggtgttgccgaacctgtagagcgtcatccgggagggctccatgtgcca 446 |||||||| ||||||||||| ||||||||||| ||||| || || |||||||| ||||| Sbjct: 6481 gagctgctcgaggtgttgccaaacctgtagagagtcatgcgagatggctccatatgcca 6423
>gb|AY108343.1| Zea mays PCO065510 mRNA sequence Length = 1496 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 286 gcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 ||||||||||| |||||||| || ||||| |||| ||||||||||||||| Sbjct: 458 gcgctgttgcacttgaagcccgacccgaaggcgagctgccagacgcggtc 507
>ref|XM_470547.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1788 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 283 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 1700 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 1648
>dbj|AK119228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A08, full insert sequence Length = 1912 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 283 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 1595 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 1543
>dbj|AK100798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F20, full insert sequence Length = 662 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 283 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 345 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 293
>dbj|AK099232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M20, full insert sequence Length = 1903 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 283 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 1586 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 1534
>dbj|AK061335.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B10, full insert sequence Length = 1909 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 283 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 1595 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 1543
>dbj|AK060840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D04, full insert sequence Length = 1907 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 283 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 1590 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 1538
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 283 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 335 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 81751 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 81699
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgcca 326 ||||||||||| || ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 108883 agcgccctccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgcca 108938 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 407 cgaacctgtagagcgtcatccgggagggctccatgtgcca 446 |||||||||| ||||||||||| || |||||||| ||||| Sbjct: 109258 cgaacctgtacagcgtcatccgtgacggctccatctgcca 109297
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 271 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgcca 326 ||||||||||| || ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 160464 agcgccctccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgcca 160519 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 407 cgaacctgtagagcgtcatccgggagggctccatgtgcca 446 |||||||||| ||||||||||| || |||||||| ||||| Sbjct: 160839 cgaacctgtacagcgtcatccgtgacggctccatctgcca 160878
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 |||||||||| ||| || ||||||||||| | |||||||| || ||||||||||||| Sbjct: 71264 cttggcctcgacgtacgccagctcgtaccacaccgagctgctcgacgtgttgccgaaccg 71323 Query: 414 gtagagcgtcatccg 428 || ||||| |||||| Sbjct: 71324 gtggagcgccatccg 71338
>dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0031A09 Length = 162511 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 354 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 413 |||||||||| ||| || ||||||||||| | |||||||| || ||||||||||||| Sbjct: 131101 cttggcctcgacgtacgccagctcgtaccacaccgagctgctcgacgtgttgccgaaccg 131160 Query: 414 gtagagcgtcatccg 428 || ||||| |||||| Sbjct: 131161 gtggagcgccatccg 131175
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0092H22 Length = 165194 Score = 50.1 bits (25), Expect = 0.007 Identities = 103/129 (79%) Strand = Plus / Plus Query: 284 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 343 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| || Sbjct: 34386 cggcgctgttgcacttgaagccggagccgaacccgatcatccacacgcggtcgccggggc 34445 Query: 344 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 403 || |||| |||||||||| ||| || ||||||||||| | |||||||| || |||| Sbjct: 34446 gcatgcggcccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgt 34505 Query: 404 tgccgaacc 412 ||||||||| Sbjct: 34506 tgccgaacc 34514 Score = 48.1 bits (24), Expect = 0.026 Identities = 54/64 (84%) Strand = Plus / Minus Query: 349 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 408 |||| |||||||||| ||| || ||||||||||| | |||||||| || ||||||||| Sbjct: 138144 cggcccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgttgccg 138085 Query: 409 aacc 412 |||| Sbjct: 138084 aacc 138081
>emb|AJ538533.1|NTA538533 Nicotiana tabacum cDNA-AFLP-fragment BC2-M44-008 Length = 435 Score = 46.1 bits (23), Expect = 0.10 Identities = 125/159 (78%) Strand = Plus / Minus Query: 289 ctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttcttgatc 348 ||||| |||||||| ||||| || ||||| |||||||| ||||||||| |||||||| Sbjct: 406 ctgttacatttgaaacctgaaccaaatgctatctgccaagttcggtctcccctcttgatc 347 Query: 349 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 408 | | ||| || || |||| || | ||||||||||| ||||| || |||||||| ||| Sbjct: 346 cttcccttagcttccgagtaggccaattcgtaccagagagagctacttgaggtgtttccg 287 Query: 409 aacctgtagagcgtcatccgggagggctccatgtgccag 447 || | || | ||||||| || ||||||||||||||| Sbjct: 286 aatcgatacaatgtcatccttgaaggctccatgtgccag 248
>ref|XM_450594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1737 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Minus Query: 352 cgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaac 411 ||||||||||| |||| ||||||||||| ||| | |||||| || |||||||||||| Sbjct: 1266 cgcttggcctcaaagtaggcgagctcgtagaagacgaggctgctcgacgtgttgccgaac 1207 Query: 412 ct 413 || Sbjct: 1206 ct 1205
>gb|BT009560.1| Triticum aestivum clone wre1n.pk0001.h6:fis, full insert mRNA sequence Length = 1565 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 gctagcaagctagagctagagctaga 157 |||||| ||||||||||||||||||| Sbjct: 1443 gctagctagctagagctagagctaga 1468
>emb|BX901898.15| Zebrafish DNA sequence from clone DKEY-148E3 in linkage group 1, complete sequence Length = 249378 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 ctaattaaaataaattaaataa 75 |||||||||||||||||||||| Sbjct: 15934 ctaattaaaataaattaaataa 15913
>gb|AC155635.3| Mus musculus BAC clone RP24-252C1 from chromosome 9, complete sequence Length = 154485 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 423 catccgggagggctccatgtgccagg 448 ||||| |||||||||||||||||||| Sbjct: 45239 catccaggagggctccatgtgccagg 45264
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 352 cgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaac 411 ||||||||||| |||| ||||||||||| ||| | |||||| || |||||||||||| Sbjct: 11690577 cgcttggcctcaaagtaggcgagctcgtagaagacgaggctgctcgacgtgttgccgaac 11690636 Query: 412 ct 413 || Sbjct: 11690637 ct 11690638
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 352 cgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaac 411 ||||||||||| |||| ||||||||||| ||| | |||||| || |||||||||||| Sbjct: 125211 cgcttggcctcaaagtaggcgagctcgtagaagacgaggctgctcgacgtgttgccgaac 125270 Query: 412 ct 413 || Sbjct: 125271 ct 125272
>dbj|AK105487.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B09, full insert sequence Length = 1737 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Minus Query: 352 cgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaac 411 ||||||||||| |||| ||||||||||| ||| | |||||| || |||||||||||| Sbjct: 1266 cgcttggcctcaaagtaggcgagctcgtagaagacgaggctgctcgacgtgttgccgaac 1207 Query: 412 ct 413 || Sbjct: 1206 ct 1205
>gb|AC147163.2| Mus musculus BAC clone RP24-317B17 from chromosome Y, complete sequence Length = 208700 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 32894 tagctagctagctagctagagctag 32870
>gb|BT013651.1| Lycopersicon esculentum clone 132458F, mRNA sequence Length = 2126 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 376 tcgtaccagagggagctgctggaggtgtt 404 |||||||| ||||||||||| |||||||| Sbjct: 1662 tcgtaccaaagggagctgcttgaggtgtt 1634
>gb|AC145593.3| Mus musculus BAC clone RP24-186P6 from chromosome Y, complete sequence Length = 162710 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 125255 tagctagctagctagctagagctag 125279
>gb|AC132341.4| Mus musculus BAC clone RP24-168C11 from chromosome Y, complete sequence Length = 142720 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 63389 tagctagctagctagctagagctag 63413
>gb|AC140427.3| Mus musculus BAC clone RP24-173G7 from chromosome Y, complete sequence Length = 182766 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 135033 tagctagctagctagctagagctag 135009
>gb|AC139196.4| Mus musculus BAC clone RP24-189L24 from chromosome Y, complete sequence Length = 143221 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 109963 tagctagctagctagctagagctag 109987
>gb|AC144409.3| Mus musculus BAC clone RP24-302I24 from chromosome Y, complete sequence Length = 148555 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 5043 tagctagctagctagctagagctag 5067
>emb|CR376773.7| Zebrafish DNA sequence from clone CH211-23E22 in linkage group 17, complete sequence Length = 167088 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 33892 taattaaaataaattaaataa 33872
>gb|AY126293.1| Mus musculus isolate 0070.HH58 M-MuLV retroviral integration site Length = 568 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ttattaatcaaaacatagagtaaaa 41 ||||||| ||||||||||||||||| Sbjct: 437 ttattaagcaaaacatagagtaaaa 413
>gb|AC117574.7| Mus musculus chromosome 5, clone RP23-32E20, complete sequence Length = 255008 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ttattaatcaaaacatagagtaaaa 41 ||||||| ||||||||||||||||| Sbjct: 39496 ttattaagcaaaacatagagtaaaa 39472
>emb|AL512426.9| Human DNA sequence from clone RP11-94K8 on chromosome 6 Contains the 3' end of a novel gene, complete sequence Length = 55224 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 33915 tagctagctagctagctagagctag 33891
>emb|AL390840.17| Human DNA sequence from clone RP13-213K19 on chromosome X Contains a tubulin beta polypeptide pseudogene, complete sequence Length = 197611 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 6240 taattaaaataaattaaataa 6220
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 cggcgtcgtcgacggtacgca 271 ||||||||||||||||||||| Sbjct: 381106 cggcgtcgtcgacggtacgca 381086
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 acgtcgacggggagcaggtgg 225 ||||||||||||||||||||| Sbjct: 1305626 acgtcgacggggagcaggtgg 1305606
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 146876 taattaaaataaattaaataa 146856 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 146519 taattaaaataaattaaataa 146499
>gb|AC100873.2| Homo sapiens chromosome 8, clone RP11-978P4, complete sequence Length = 153581 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 31182 taattaaaataaattaaataa 31202
>gb|AC132294.4| Mus musculus BAC clone RP24-324F17 from chromosome y, complete sequence Length = 174347 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 144078 tagctagctagctagctagagctag 144102
>gb|AC182730.2| Mus musculus BAC clone RP24-254G5 from chromosome y, complete sequence Length = 162064 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 78768 tagctagctagctagctagagctag 78792
>gb|AC027287.21| Homo sapiens 12 BAC RP11-616L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 202703 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 194673 taattaaaataaattaaataa 194653
>gb|AC021500.6| Homo sapiens chromosome 8, clone RP11-135K1, complete sequence Length = 160348 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 110529 taattaaaataaattaaataa 110509
>gb|AC175381.3| Mus musculus BAC clone RP24-195K22 from chromosome y, complete sequence Length = 159477 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 91592 tagctagctagctagctagagctag 91616
>emb|BX664625.12| Zebrafish DNA sequence from clone DKEY-286J17 in linkage group 22, complete sequence Length = 142350 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 110283 taattaaaataaattaaataa 110263
>emb|BX649547.7| Zebrafish DNA sequence from clone DKEY-19E10 in linkage group 3, complete sequence Length = 237569 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 182928 taattaaaataaattaaataa 182908
>emb|BX548032.5| Zebrafish DNA sequence from clone CH211-145G9 in linkage group 17, complete sequence Length = 161483 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 85874 taattaaaataaattaaataa 85854
>gb|AF254136.3| Homo sapiens chromosome 8 clone RP11-386F22, RP11-820H12 map q24.2, complete sequence Length = 184865 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 22028 taattaaaataaattaaataa 22048
>emb|AL929390.14| Mouse DNA sequence from clone RP23-107J3 on chromosome 4, complete sequence Length = 146977 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 aaaaagaagttattaatcaaa 28 ||||||||||||||||||||| Sbjct: 99296 aaaaagaagttattaatcaaa 99316
>emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 in linkage group 6, complete sequence Length = 167320 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 8621 taattaaaataaattaaataa 8601
>emb|AJ486858.1|AAN486858 Anguilla anguilla mRNA for putative sodium-potassium-chloride cotransporter (nkcc1a gene) Length = 4063 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggtagctagctagcaagctag 144 ||||||||||||||||||||| Sbjct: 255 ggtagctagctagcaagctag 235
>dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2 Length = 70952 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cctaattaaaataaattaaat 73 ||||||||||||||||||||| Sbjct: 4815 cctaattaaaataaattaaat 4795
>emb|BX511259.14| Zebrafish DNA sequence from clone CH211-125E6 in linkage group 9, complete sequence Length = 182412 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 86054 taattaaaataaattaaataa 86074
>emb|AL954843.8| Zebrafish DNA sequence from clone DKEY-149K8 in linkage group 15, complete sequence Length = 204599 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 142247 taattaaaataaattaaataa 142267
>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence Length = 209938 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ttattaatcaaaacatagagtaaaa 41 ||||||| ||||||||||||||||| Sbjct: 36727 ttattaagcaaaacatagagtaaaa 36751
>gb|AC142490.3| Mus musculus BAC clone RP24-362J19 from Y, complete sequence Length = 184480 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 tagctagctagcaagctagagctag 150 |||||||||||| |||||||||||| Sbjct: 179451 tagctagctagctagctagagctag 179427
>gb|AC151298.3| Mus musculus BAC clone RP23-7F9 from chromosome 17, complete sequence Length = 198349 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 taaaataaattaaataagcct 79 ||||||||||||||||||||| Sbjct: 96984 taaaataaattaaataagcct 96964
>gb|AC104316.3| Homo sapiens chromosome 8 clone RP11-557C18 map 8q24.2, complete sequence Length = 166862 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 taattaaaataaattaaataa 75 ||||||||||||||||||||| Sbjct: 153805 taattaaaataaattaaataa 153825
>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence Length = 200560 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cctaattaaaataaattaaa 72 |||||||||||||||||||| Sbjct: 167628 cctaattaaaataaattaaa 167609
>ref|XM_478776.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3961 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ggagctgctggaggtgttgc 406 |||||||||||||||||||| Sbjct: 3029 ggagctgctggaggtgttgc 3048
>gb|AC163443.6| Mus musculus chromosome 15, clone RP23-284G17, complete sequence Length = 213017 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cctaattaaaataaattaaa 72 |||||||||||||||||||| Sbjct: 114753 cctaattaaaataaattaaa 114734
>gb|AC150871.4| Bos taurus BAC CH240-316E7 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 167244 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ctaattaaaataaattaaataagc 77 |||||||||||||||||| ||||| Sbjct: 71938 ctaattaaaataaattaattaagc 71961
>gb|AC149296.1| Populus trichocarpa clone Pop1-012O23, complete sequence Length = 123280 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gtagctagctagcaagctag 144 |||||||||||||||||||| Sbjct: 104986 gtagctagctagcaagctag 104967
>gb|AC147258.2| Mus musculus BAC clone RP24-297K13 from chromosome 9, complete sequence Length = 156497 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 cctaattaaaataaattaaa 72 |||||||||||||||||||| Sbjct: 31315 cctaattaaaataaattaaa 31334
>ref|XM_849525.1| PREDICTED: Canis familiaris similar to Transcription initiation factor TFIID subunit 12 (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15) (LOC612995), mRNA Length = 1034 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaagaagttattaatcaaaa 29 |||||||||||||||||||| Sbjct: 1008 aaagaagttattaatcaaaa 1027
>gb|AC122252.4| Mus musculus BAC clone RP23-170E7 from chromosome 17, complete sequence Length = 219695 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 cagagggagctgctggaggt 401 |||||||||||||||||||| Sbjct: 114554 cagagggagctgctggaggt 114573
>gb|AC121793.3| Mus musculus BAC clone RP23-407B23 from chromosome 9, complete sequence Length = 194815 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 agctagagctagagctagat 158 |||||||||||||||||||| Sbjct: 45577 agctagagctagagctagat 45558
>gb|AC069564.34| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435n13, complete sequence Length = 185784 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 cagagggagctgctggaggt 401 |||||||||||||||||||| Sbjct: 5315 cagagggagctgctggaggt 5296
>emb|BX897746.7| Zebrafish DNA sequence from clone DKEY-112E1 in linkage group 14, complete sequence Length = 98532 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 1356 aattaaaataaattaaataa 1375
>emb|BX897686.8| Zebrafish DNA sequence from clone DKEY-145M5 in linkage group 15, complete sequence Length = 115533 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ctaattaaaataaattaaat 73 |||||||||||||||||||| Sbjct: 91228 ctaattaaaataaattaaat 91209
>emb|CR855267.20| Zebrafish DNA sequence from clone DKEY-220L13, complete sequence Length = 142801 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 140160 aattaaaataaattaaataa 140179
>emb|AL391994.28| Human DNA sequence from clone RP11-382D8 on chromosome 1 Contains the 5' end of the ARID4B gene for AT rich interactive domain 4B (RBP1- like), a ribosomal protein L23a (RPL23A) pseudogene, ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) (UBE2G10 pseudogene, the GGPS1 gene for geranylgeranyl diphosphate synthase 1 and two CpG islands, complete sequence Length = 142273 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 132325 aattaaaataaattaaataa 132344
>gb|AC018977.9| Homo sapiens chromosome 10 clone RP11-386C23, complete sequence Length = 222810 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 187213 aattaaaataaattaaataa 187194
>emb|AL136091.6| Human DNA sequence from clone RP1-80E10 on chromosome 6 Contains the 3' end of a ribosomal protein S15a (RPS15A) pseudogene, complete sequence Length = 16242 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cctaattaaaataaattaaa 72 |||||||||||||||||||| Sbjct: 14746 cctaattaaaataaattaaa 14727
>gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence Length = 164663 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 ccgggagggctccatgtgccaggg 449 ||||||||||||||| |||||||| Sbjct: 73987 ccgggagggctccatctgccaggg 74010
>emb|X73282.1|CPGPD Claviceps purpurea GPD 1 gene for glyceraldehyde-3-phosphate dehydrogenase Length = 3495 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 aagctagagctagagctaga 157 |||||||||||||||||||| Sbjct: 1705 aagctagagctagagctaga 1686
>gb|DQ431198.1| Homo sapiens interleukin 9 receptor (IL9Rps) pseudogene, complete sequence; and DNA-directed RNA polymerases III 12.5 kDa polypeptide (POLR3K), U11/U12 snRNP 25 kDa protein (C16orf33), RHBDG1 (C16orf8), DNA-3-methyladenine glycosylase (MPG), -14 gene protein (C16orf35), hemoglobin zeta subunit (HBZ), HBD (HBD), alpha globin (HBA2), alpha globin (HBA1), theta globin (HBQ1), and putative RNA-binding protein Luc7-like 1 (LUC7L) genes, complete cds Length = 214426 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 189107 aattaaaataaattaaataa 189126
>emb|CR854914.10| Zebrafish DNA sequence from clone DKEY-256M11 in linkage group 5, complete sequence Length = 103750 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 5173 aattaaaataaattaaataa 5154
>emb|AL646056.18| Mouse DNA sequence from clone RP23-412O18 on chromosome 11, complete sequence Length = 111791 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 aagctagagctagagctaga 157 |||||||||||||||||||| Sbjct: 25251 aagctagagctagagctaga 25232
>gb|AE006462.1| Homo sapiens 16p13.3 sequence section 1 of 8 Length = 258002 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 209408 aattaaaataaattaaataa 209427
>emb|AL731821.10| Mouse DNA sequence from clone RP23-81G15 on chromosome 4, complete sequence Length = 126671 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 agctagagctagagctagat 158 |||||||||||||||||||| Sbjct: 104199 agctagagctagagctagat 104180
>emb|AL627305.12| Zebrafish DNA sequence from clone RP71-1H20 in linkage group 21 Contains a part of a novel gene similar to human ADD1 (alpha adducin 1), a novel gene, three putative novel genes and five CpG islands, complete sequence Length = 150276 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 33407 aattaaaataaattaaataa 33426
>emb|AL627261.10| Zebrafish DNA sequence from clone RP71-1N11 in linkage group 9 Contains three CpG islands, complete sequence Length = 147392 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 82601 aattaaaataaattaaataa 82582
>gb|AY271630.1| Amycolatopsis lactamdurans isolate AAL14 putative NRPS gene, partial cds Length = 699 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 185 cgatgggcaccaccttgggcacgtcgacggggagcaggtg 224 ||||||||||||| | |||||||||| |||| ||| |||| Sbjct: 498 cgatgggcaccacgtcgggcacgtcgccgggcagcgggtg 459
>emb|BX649389.12| Zebrafish DNA sequence from clone DKEY-28D3 in linkage group 1, complete sequence Length = 110743 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cctaattaaaataaattaaa 72 |||||||||||||||||||| Sbjct: 16088 cctaattaaaataaattaaa 16069
>emb|BX511308.11| Zebrafish DNA sequence from clone DKEYP-118E10 in linkage group 15, complete sequence Length = 123109 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 ctaattaaaataaattaaat 73 |||||||||||||||||||| Sbjct: 58923 ctaattaaaataaattaaat 58942
>emb|BX548035.8| Zebrafish DNA sequence from clone CH211-190F24 in linkage group 24, complete sequence Length = 156349 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 116714 aattaaaataaattaaataa 116733
>gb|AC112250.4| Homo sapiens BAC clone RP11-710E1 from 4, complete sequence Length = 79475 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gggagcaggtggaggtcctg 233 |||||||||||||||||||| Sbjct: 72983 gggagcaggtggaggtcctg 72964
>gb|AF275231.1| Phloeomyzus passerinii 12S small subunit ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S large subunit ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 1635 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 971 aattaaaataaattaaataa 952
>gb|AC008846.7| Homo sapiens chromosome 5 clone CTD-2165G8, complete sequence Length = 92740 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 50835 aattaaaataaattaaataa 50816
>gb|AC024561.5| Homo sapiens chromosome 5 clone CTB-94B10, complete sequence Length = 155125 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 78261 aattaaaataaattaaataa 78280
>emb|BX323446.10| Zebrafish DNA sequence from clone DKEYP-99F11 in linkage group 17, complete sequence Length = 184290 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 128436 aattaaaataaattaaataa 128455
>emb|BX465229.7| Zebrafish DNA sequence from clone CH211-174D2 in linkage group 2, complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 28708 aattaaaataaattaaataa 28689
>gb|AC123660.8| Mus musculus chromosome 3, clone RP23-196E24, complete sequence Length = 211632 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 taattaaaataaattaaata 74 |||||||||||||||||||| Sbjct: 13786 taattaaaataaattaaata 13805
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tctcgccggcgtcgtcgacg 264 |||||||||||||||||||| Sbjct: 820360 tctcgccggcgtcgtcgacg 820379
>emb|BX248327.7| Zebrafish DNA sequence from clone CH211-206E6, complete sequence Length = 163307 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 645 aattaaaataaattaaataa 626
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agctagagctagagctagat 158 |||||||||||||||||||| Sbjct: 15368668 agctagagctagagctagat 15368687
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 agccagaggtagctagctagcaag 140 ||||||| |||||||||||||||| Sbjct: 25392731 agccagatgtagctagctagcaag 25392754
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 ggagctgctggaggtgttgc 406 |||||||||||||||||||| Sbjct: 22997024 ggagctgctggaggtgttgc 22997005
>emb|BX005443.17| Zebrafish DNA sequence from clone CH211-167L23 in linkage group 17, complete sequence Length = 132502 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 4698 aattaaaataaattaaataa 4679
>gb|AC124420.4| Mus musculus BAC clone RP24-322N8 from chromosome 12, complete sequence Length = 164950 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 cctaattaaaataaattaaa 72 |||||||||||||||||||| Sbjct: 96590 cctaattaaaataaattaaa 96609
>gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, complete sequence Length = 137009 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 aagctagagctagagctaga 157 |||||||||||||||||||| Sbjct: 24679 aagctagagctagagctaga 24698
>gb|AC112666.9| Mus musculus chromosome 3, clone RP24-119D5, complete sequence Length = 193302 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 taattaaaataaattaaata 74 |||||||||||||||||||| Sbjct: 75956 taattaaaataaattaaata 75975
>gb|AC091983.3| Homo sapiens chromosome 5 clone RP11-559F22, complete sequence Length = 110999 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 28130 aattaaaataaattaaataa 28149
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 ggagctgctggaggtgttgc 406 |||||||||||||||||||| Sbjct: 72238 ggagctgctggaggtgttgc 72219
>emb|BX248311.6| Zebrafish DNA sequence from clone BUSM1-71F1 in linkage group 9, complete sequence Length = 143593 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 135096 aattaaaataaattaaataa 135115
>emb|BX247871.7| Zebrafish DNA sequence from clone CH211-190P8, complete sequence Length = 145789 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 126828 aattaaaataaattaaataa 126809
>emb|BX005122.10| Zebrafish DNA sequence from clone CH211-134D11, complete sequence Length = 184142 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 118897 aattaaaataaattaaataa 118916
>dbj|BS000065.1| Pan troglodytes chromosome 22 clone:RP43-042H09, map 22, complete sequences Length = 154519 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ccgcctaattaaaataaattaaat 73 ||||||||||||||||||| |||| Sbjct: 27259 ccgcctaattaaaataaataaaat 27236
>dbj|BS000064.1| Pan troglodytes chromosome 22 clone:RP43-044K09, map 22, complete sequences Length = 178960 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ccgcctaattaaaataaattaaat 73 ||||||||||||||||||| |||| Sbjct: 134721 ccgcctaattaaaataaataaaat 134698
>emb|AL928618.10| Zebrafish DNA sequence from clone CH211-10O8, complete sequence Length = 103507 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ccagagggagctgctggagg 400 |||||||||||||||||||| Sbjct: 101087 ccagagggagctgctggagg 101106
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 agccagaggtagctagctagcaag 140 ||||||| |||||||||||||||| Sbjct: 24047 agccagatgtagctagctagcaag 24070
>dbj|AK099771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D13, full insert sequence Length = 3961 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ggagctgctggaggtgttgc 406 |||||||||||||||||||| Sbjct: 3029 ggagctgctggaggtgttgc 3048
>dbj|AK067380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N15, full insert sequence Length = 1636 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ggagctgctggaggtgttgc 406 |||||||||||||||||||| Sbjct: 929 ggagctgctggaggtgttgc 948
>emb|AL732415.9| Zebrafish DNA sequence from clone BUSM1-106A20 in linkage group 9, complete sequence Length = 112460 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 99453 aattaaaataaattaaataa 99434
>gb|AY108404.1| Zea mays PCO135296 mRNA sequence Length = 554 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 349 cggcgcttggcctcgcagtatgcgagctcgta 380 ||||||||||||||| |||| || |||||||| Sbjct: 91 cggcgcttggcctcgaagtaggccagctcgta 60
>gb|AF152064.1|AF152064 Anastrepha dryas 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 852 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 218 aattaaaataaattaaataa 199
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tcttgatccggcgcttggcc 360 |||||||||||||||||||| Sbjct: 2025743 tcttgatccggcgcttggcc 2025762
>emb|AL662972.3|OSJN00173 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063G07, complete sequence Length = 157622 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agctagagctagagctagat 158 |||||||||||||||||||| Sbjct: 57552 agctagagctagagctagat 57571
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 agaggtagctagctagcaag 140 |||||||||||||||||||| Sbjct: 87468 agaggtagctagctagcaag 87487
>gb|AC127691.4| Mus musculus BAC clone RP24-216M10 from 9, complete sequence Length = 153242 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 cctaattaaaataaattaaa 72 |||||||||||||||||||| Sbjct: 108910 cctaattaaaataaattaaa 108929
>gb|AC135360.3| Mus musculus BAC clone RP24-396P4 from 10, complete sequence Length = 154276 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 accagagggagctgctggag 399 |||||||||||||||||||| Sbjct: 37580 accagagggagctgctggag 37561
>emb|Z69890.1|HSRJ14 Human DNA sequence from clone XX-CRJ14 on chromosome 16, complete sequence Length = 28265 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 14253 aattaaaataaattaaataa 14272
>emb|AL953906.6| Mouse DNA sequence from clone RP23-109E21 on chromosome 2, complete sequence Length = 172246 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aattaaaataaattaaataa 75 |||||||||||||||||||| Sbjct: 113414 aattaaaataaattaaataa 113433
>emb|AL845285.5| Mouse DNA sequence from clone RP23-167M2 on chromosome 2, complete sequence Length = 143280 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 cctaattaaaataaattaaa 72 |||||||||||||||||||| Sbjct: 123246 cctaattaaaataaattaaa 123265
>emb|X83420.1|LEALUI L.esculentum mRNA for Alu I-fragment Length = 268 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 376 tcgtaccagagggagctgctggaggtgttgcc 407 |||||||| ||||||||||| || |||||||| Sbjct: 47 tcgtaccaaagggagctgcttgaagtgttgcc 16
>emb|AL845449.4| Mouse DNA sequence from clone RP23-211M20 on chromosome 2, complete sequence Length = 226324 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 taattaaaataaattaaata 74 |||||||||||||||||||| Sbjct: 61541 taattaaaataaattaaata 61560
>emb|AL805953.5| Mouse DNA sequence from clone RP23-189N21 on chromosome 2, complete sequence Length = 173345 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 cctccagacggcgctgttgcattt 299 |||||||| ||||||||||||||| Sbjct: 67819 cctccagagggcgctgttgcattt 67796 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,240,507 Number of Sequences: 3902068 Number of extensions: 4240507 Number of successful extensions: 125331 Number of sequences better than 10.0: 182 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 123340 Number of HSP's gapped (non-prelim): 1969 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
