| Clone Name | rbaet70c10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009584.1| Triticum aestivum clone wre1n.pk0044.b2:fis, full insert mRNA sequence Length = 876 Score = 440 bits (222), Expect = e-120 Identities = 255/266 (95%) Strand = Plus / Minus Query: 142 ctccttacgcgagctctataacaagtgcaaatgcaccgccaccgccgttgcagacaccag 201 |||||||||| ||||| ||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 659 ctccttacgccagctccataacgagcgcagatgcaccgccaccgccgttgcagacaccag 600 Query: 202 caactccgatcttgccacccttctccctaagaacaccaagaagggtgaccaaaatgcgag 261 |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 599 caactccgatcttgccactcttctccctaagaacaccgagaagggtgaccaaaatgcgag 540 Query: 262 caccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatctttt 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 caccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatctttt 480 Query: 322 ctgaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaa 381 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 479 ctgaaggaattccgagaagcttttgatttgcaagtgcaacagccgaaaaggcttcattga 420 Query: 382 tttcataaaaatcaacacgagaggac 407 ||||||||||||||| |||||||||| Sbjct: 419 tttcataaaaatcaatacgagaggac 394 Score = 87.7 bits (44), Expect = 3e-14 Identities = 63/68 (92%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 2 agttctaagttaaccaattacttaatctggcacagcactatcaaatgcagtac-tagaat 60 ||||||||||||| ||||||||||||||| ||||||||||| |||| |||||| |||||| Sbjct: 751 agttctaagttaatcaattacttaatctgacacagcactatgaaatacagtacatagaat 692 Query: 61 tttacatg 68 |||||||| Sbjct: 691 tttacatg 684 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gcaggctccatctttggtgt 124 |||||||||||||||||||| Sbjct: 684 gcaggctccatctttggtgt 665
>ref|XM_450298.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1689 Score = 301 bits (152), Expect = 9e-79 Identities = 212/232 (91%) Strand = Plus / Minus Query: 172 atgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctccctaa 231 |||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 1318 atgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctccctaa 1259 Query: 232 gaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaag 291 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||||| Sbjct: 1258 gaacaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcctaaag 1199 Query: 292 atacagctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttgatttg 351 | |||||||||||||||||||| || |||||||||||||| || |||||||||||||||| Sbjct: 1198 acacagctcctccatgtacattaattttttctgaaggaattccaagaagcttttgatttg 1139 Query: 352 caagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacgaga 403 ||||||||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 1138 caagtgcaacagctgaaaaggcttcattaatttcatagtaatcaacacgaga 1087
>dbj|AK102536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096I21, full insert sequence Length = 1689 Score = 301 bits (152), Expect = 9e-79 Identities = 212/232 (91%) Strand = Plus / Minus Query: 172 atgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctccctaa 231 |||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 1318 atgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctccctaa 1259 Query: 232 gaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaag 291 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||||| Sbjct: 1258 gaacaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcctaaag 1199 Query: 292 atacagctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttgatttg 351 | |||||||||||||||||||| || |||||||||||||| || |||||||||||||||| Sbjct: 1198 acacagctcctccatgtacattaattttttctgaaggaattccaagaagcttttgatttg 1139 Query: 352 caagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacgaga 403 ||||||||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 1138 caagtgcaacagctgaaaaggcttcattaatttcatagtaatcaacacgaga 1087
>dbj|AK059654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C10, full insert sequence Length = 1609 Score = 301 bits (152), Expect = 9e-79 Identities = 212/232 (91%) Strand = Plus / Minus Query: 172 atgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctccctaa 231 |||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 1144 atgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctccctaa 1085 Query: 232 gaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaag 291 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||||| Sbjct: 1084 gaacaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcctaaag 1025 Query: 292 atacagctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttgatttg 351 | |||||||||||||||||||| || |||||||||||||| || |||||||||||||||| Sbjct: 1024 acacagctcctccatgtacattaattttttctgaaggaattccaagaagcttttgatttg 965 Query: 352 caagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacgaga 403 ||||||||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 964 caagtgcaacagctgaaaaggcttcattaatttcatagtaatcaacacgaga 913
>gb|AY103699.1| Zea mays PCO140839 mRNA sequence Length = 1749 Score = 293 bits (148), Expect = 2e-76 Identities = 199/216 (92%) Strand = Plus / Minus Query: 183 ccgccgttgcagacaccagcaactccgatcttgccacccttctccctaagaacaccaaga 242 ||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct: 1375 ccgccgttgcagacaccagcaacaccgatcttgccgcccttttccctaaggacaccaaga 1316 Query: 243 agggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcct 302 ||||||||||||||||||||||| ||||||||||| || || |||| ||| ||||||||| Sbjct: 1315 agggtgaccaaaatgcgagcaccgctgcacccaagaggatgccctagagacacagctcct 1256 Query: 303 ccatgtacatttatcttttctgaaggaatcccgagaagcttttgatttgcaagtgcaaca 362 ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1255 ccatggacattaatcttttctgaaggaatcccaagaagcttttgatttgcaagtgcgaca 1196 Query: 363 gccgaaaatgcttcattaatttcataaaaatcaaca 398 || ||||||||||||||||| ||| ||||||||||| Sbjct: 1195 gcagaaaatgcttcattaatctcaaaaaaatcaaca 1160
>gb|AF113522.1|AF113522 Zea mays cultivar TX-5855 acetoacetyl CoA thiolase mRNA, partial cds Length = 971 Score = 293 bits (148), Expect = 2e-76 Identities = 199/216 (92%) Strand = Plus / Minus Query: 183 ccgccgttgcagacaccagcaactccgatcttgccacccttctccctaagaacaccaaga 242 ||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct: 579 ccgccgttgcagacaccagcaacaccgatcttgccgcccttttccctaaggacaccaaga 520 Query: 243 agggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcct 302 ||||||||||||||||||||||| ||||||||||| || || |||| ||| ||||||||| Sbjct: 519 agggtgaccaaaatgcgagcaccgctgcacccaagaggatgccctagagacacagctcct 460 Query: 303 ccatgtacatttatcttttctgaaggaatcccgagaagcttttgatttgcaagtgcaaca 362 ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 459 ccatggacattaatcttttctgaaggaatcccaagaagcttttgatttgcaagtgcgaca 400 Query: 363 gccgaaaatgcttcattaatttcataaaaatcaaca 398 || ||||||||||||||||| ||| ||||||||||| Sbjct: 399 gcagaaaatgcttcattaatctcaaaaaaatcaaca 364
>gb|BT018966.1| Zea mays clone Contig360.F mRNA sequence Length = 1615 Score = 266 bits (134), Expect = 5e-68 Identities = 224/254 (88%) Strand = Plus / Minus Query: 145 cttacgcgagctctataacaagtgcaaatgcaccgccaccgccgttgcagacaccagcaa 204 |||| |||||||| | |||||| || |||| || || || ||||||||||||||||||| Sbjct: 1339 cttatgcgagctccagaacaagagctgatgctccccctcccccgttgcagacaccagcaa 1280 Query: 205 ctccgatcttgccacccttctccctaagaacaccaagaagggtgaccaaaatgcgagcac 264 |||| || ||||||| |||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 1279 ctcccattttgccactcttcgccctgagaacaccaataagggtaaccaaaatgcgagcac 1220 Query: 265 cactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttctg 324 | |||| ||| || || |||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 1219 ccctgcccccgagaggatgtcctaaagatacagctcccccatgaacattaatcttttctg 1160 Query: 325 aaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaattt 384 ||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 1159 aaggaattccaagaagcttttgatttgcaagtgcaacagccgaaaaggcttcattaatct 1100 Query: 385 cataaaaatcaaca 398 |||| ||||||||| Sbjct: 1099 catagaaatcaaca 1086
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 113 bits (57), Expect = 5e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 234 acaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagat 293 |||||||| |||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 3920759 acaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcctaaagac 3920700 Query: 294 acagctcctccatgtacatttatcttttc 322 |||||||||||||||||||| || ||||| Sbjct: 3920699 acagctcctccatgtacattaattttttc 3920671 Score = 79.8 bits (40), Expect = 6e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 172 atgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctccctaa 231 |||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 3921076 atgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctccctaa 3921017 Query: 232 gaac 235 |||| Sbjct: 3921016 gaac 3921013 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 322 ctgaaggaatcccgagaagcttttgatttgcaagtgcaacagcc 365 |||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3920499 ctgaaggaattccaagaagcttttgatttgcaagtgcaacagcc 3920456 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 366 gaaaatgcttcattaatttcataaaaatcaacacgaga 403 ||||| ||||||||||||||||| ||||||||||||| Sbjct: 3920354 gaaaaggcttcattaatttcatagtaatcaacacgaga 3920317
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0574F11 Length = 159891 Score = 113 bits (57), Expect = 5e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 234 acaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagat 293 |||||||| |||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 52271 acaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcctaaagac 52212 Query: 294 acagctcctccatgtacatttatcttttc 322 |||||||||||||||||||| || ||||| Sbjct: 52211 acagctcctccatgtacattaattttttc 52183 Score = 79.8 bits (40), Expect = 6e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 172 atgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctccctaa 231 |||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 52588 atgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctccctaa 52529 Query: 232 gaac 235 |||| Sbjct: 52528 gaac 52525 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 322 ctgaaggaatcccgagaagcttttgatttgcaagtgcaacagcc 365 |||||||||| || |||||||||||||||||||||||||||||| Sbjct: 52011 ctgaaggaattccaagaagcttttgatttgcaagtgcaacagcc 51968 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 366 gaaaatgcttcattaatttcataaaaatcaacacgaga 403 ||||| ||||||||||||||||| ||||||||||||| Sbjct: 51866 gaaaaggcttcattaatttcatagtaatcaacacgaga 51829
>ref|NM_180823.1| Arabidopsis thaliana EMB1276; acetyl-CoA C-acetyltransferase AT5G48230 (EMB1276) transcript variant AT5G48230.1 mRNA, complete cds Length = 1731 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 264 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 323 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1148 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1089 Query: 324 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 383 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1088 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1029 Query: 384 tcataaaaatcaac 397 ||||| ||||||| Sbjct: 1028 tcatagtaatcaac 1015
>ref|NM_124198.2| Arabidopsis thaliana EMB1276; acetyl-CoA C-acetyltransferase AT5G48230 (EMB1276) transcript variant AT5G48230.2 mRNA, complete cds Length = 1993 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 264 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 323 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1410 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1351 Query: 324 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 383 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1350 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1291 Query: 384 tcataaaaatcaac 397 ||||| ||||||| Sbjct: 1290 tcatagtaatcaac 1277
>gb|AY091271.1| Arabidopsis thaliana putative acetyl-CoA C-acetyltransferase (At5g48230) mRNA, complete cds Length = 1228 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 264 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 323 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1079 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1020 Query: 324 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 383 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1019 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 960 Query: 384 tcataaaaatcaac 397 ||||| ||||||| Sbjct: 959 tcatagtaatcaac 946
>gb|AY059736.1| Arabidopsis thaliana putative acetyl-CoA C-acetyltransferase (At5g48230) mRNA, complete cds Length = 1531 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 264 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 323 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1150 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1091 Query: 324 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 383 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1090 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1031 Query: 384 tcataaaaatcaac 397 ||||| ||||||| Sbjct: 1030 tcatagtaatcaac 1017
>gb|AF364059.1| Arabidopsis thaliana acetoacetyl-CoA thiolase (AAT1) mRNA, complete cds Length = 1736 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 264 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 323 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1281 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1222 Query: 324 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 383 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1221 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1162 Query: 384 tcataaaaatcaac 397 ||||| ||||||| Sbjct: 1161 tcatagtaatcaac 1148
>gb|AF429383.1|AF429383 Hevea brasiliensis acetyl Co-A acetyltransferase mRNA, complete cds Length = 1669 Score = 85.7 bits (43), Expect = 1e-13 Identities = 124/151 (82%) Strand = Plus / Minus Query: 246 gtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcctcca 305 |||||||| || ||||| |||||||| || | ||| ||||| |||||||||||||||||| Sbjct: 1263 gtgaccaagatacgagctccactgcatcctaatggatgtcccaaagatacagctcctcca 1204 Query: 306 tgtacatttatcttttctgaaggaatcccgagaagcttttgatttgcaagtgcaacagcc 365 || ||||||| ||||| | | || || || | ||||||||| ||||| || ||| | Sbjct: 1203 tgaacatttaatttttcaggattaagaccaagtatcttttgattggcaagggccacaaca 1144 Query: 366 gaaaatgcttcattaatttcataaaaatcaa 396 |||||||||||||| ||||||||| |||||| Sbjct: 1143 gaaaatgcttcatttatttcataataatcaa 1113
>gb|AY748245.1| Nicotiana tabacum cytosolic acetoacetyl-coenzyme A thiolase (AACT1) mRNA, complete cds Length = 1455 Score = 79.8 bits (40), Expect = 6e-12 Identities = 124/152 (81%) Strand = Plus / Minus Query: 237 ccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagataca 296 |||||||| || ||||| || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 1142 ccaagaagtgtaaccaatatacgagctccactgcatccaagagggtgccccaaagataca 1083 Query: 297 gctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttgatttgcaagt 356 ||||| ||||||||||| | ||||||| | || || || ||||||||||||||||| Sbjct: 1082 gctccaccatgtacattaactttttctggattaagaccaagcagcttttgatttgcaaga 1023 Query: 357 gcaacagccgaaaatgcttcattaatttcata 388 | || | | ||| ||||||||||||||||| Sbjct: 1022 gataccacagcaaaagcttcattaatttcata 991
>emb|X78116.1|RSLAACT R.sativus L. (Saxa knacker) AACT mRNA Length = 1462 Score = 67.9 bits (34), Expect = 2e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 264 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 323 |||||||| || || || |||||||| || || |||||||||| |||||| | ||| || Sbjct: 1145 ccactgcagcctagaggatgtcctaaggagacggctcctccatttacattcaccttctcc 1086 Query: 324 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 383 | | |||||| || |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1085 ggactaatcccaagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1026 Query: 384 tcataaaaatcaac 397 ||||| ||||||| Sbjct: 1025 tcatagtaatcaac 1012
>gb|AC155343.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH077A05, complete sequence Length = 113253 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 gtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcctcca 305 ||||| |||||||||||||||||||| || ||||| ||||| || | ||||| |||||| Sbjct: 23105 gtgactaaaatgcgagcaccactgcatcccagtggatgtcccaatgcaacagcccctcca 23164 Query: 306 tgtacatt 313 ||| |||| Sbjct: 23165 tgtgcatt 23172
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21 Length = 59372 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 329 aatcccgagaagcttttgatttgcaagtgc 358 ||||||||| |||||||||||||||||||| Sbjct: 44470 aatcccgagtagcttttgatttgcaagtgc 44499 Score = 46.1 bits (23), Expect = 0.088 Identities = 38/43 (88%) Strand = Plus / Plus Query: 264 ccactgcacccaagtgggtgtcctaaagatacagctcctccat 306 |||||||| || || ||||||||||| || ||||||||||||| Sbjct: 44303 ccactgcagcctagagggtgtcctaaggagacagctcctccat 44345
>gb|AC141108.3| Medicago truncatula clone mth2-22g6, complete sequence Length = 119745 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 344 ttgatttgcaagtgcaacagcc 365 |||||||||||||||||||||| Sbjct: 54124 ttgatttgcaagtgcaacagcc 54145
>gb|AC169705.1| Rhesus Macaque BAC CH250-174C17 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 181644 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aagcttttgatttgcaagtgc 358 ||||||||||||||||||||| Sbjct: 170248 aagcttttgatttgcaagtgc 170268
>ref|XM_716682.1| Candida albicans SC5314 putative peroxisomal 3-ketoacyl-CoA thiolase (CaO19_1704), mRNA Length = 1233 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 aaatgcttcattaatttcataaaaatcaa 396 |||||||||||| |||||||||| ||||| Sbjct: 1017 aaatgcttcattgatttcataaatatcaa 989
>ref|XM_716561.1| Candida albicans SC5314 putative peroxisomal 3-ketoacyl-CoA thiolase (CaO19_9271), mRNA Length = 1233 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 aaatgcttcattaatttcataaaaatcaa 396 |||||||||||| |||||||||| ||||| Sbjct: 1017 aaatgcttcattgatttcataaatatcaa 989
>ref|XM_724739.1| Plasmodium yoelii yoelii str. 17XNL acetyl-coa acetyltransferase (PY01991) partial mRNA Length = 1194 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 ttcattaatttcataaaaatcaaca 398 |||||||||||||||| |||||||| Sbjct: 966 ttcattaatttcataataatcaaca 942
>ref|XM_736099.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000254.00.0) partial mRNA Length = 267 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 ttcattaatttcataaaaatcaaca 398 |||||||||||||||| |||||||| Sbjct: 39 ttcattaatttcataataatcaaca 15
>ref|XM_674793.1| Plasmodium berghei strain ANKA acetyl-CoA acetyltransferase, (PB001025.03.0) partial mRNA Length = 1194 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 ttcattaatttcataaaaatcaaca 398 |||||||||||||||| |||||||| Sbjct: 966 ttcattaatttcataataatcaaca 942
>gb|AY282499.1| Pseudopleuronectes americanus ple8 and ple9 pseudogenes, complete sequence; and pleurocidin-like peptide WF2 (ple2a) gene, complete cds Length = 12576 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 tctataacaagtgcaaatgca 176 ||||||||||||||||||||| Sbjct: 9483 tctataacaagtgcaaatgca 9503
>emb|AL603724.3|RN141K6 Rattus norvegicus chromosome 20 clone PAC RPCI-31-484K6 strain Brown Norway (BN/ssNHsd), RT1n haplotype Length = 94535 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 gacacacaagcacctgaaact 91 ||||||||||||||||||||| Sbjct: 9519 gacacacaagcacctgaaact 9499
>dbj|D13470.1|YSACTPACTA Candida tropicalis CTPACTA gene for acetoacetyl-CoA thiolase A, complete cds Length = 1702 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 174 gcaccgccaccgccgttgcagacaccagcaactccga 210 ||||| |||||||| || |||||||||||||| |||| Sbjct: 1431 gcaccaccaccgccattacagacaccagcaacaccga 1395
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 tttatcttttctgaaggaatc 332 ||||||||||||||||||||| Sbjct: 789869 tttatcttttctgaaggaatc 789889
>emb|AJ430527.1|PWO430527 Passionfruit woodiness virus partial genomic RNA for polyprotein, genomic RNA Length = 1260 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cattaatttcataaaaatcaa 396 ||||||||||||||||||||| Sbjct: 823 cattaatttcataaaaatcaa 803
>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence Length = 205646 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 acatggagacacacaagcac 83 |||||||||||||||||||| Sbjct: 45272 acatggagacacacaagcac 45253
>gb|AC107868.9| Mus musculus chromosome 17, clone RP23-405A17, complete sequence Length = 193624 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 attaatttcataaaaatcaa 396 |||||||||||||||||||| Sbjct: 151141 attaatttcataaaaatcaa 151160
>ref|XM_454425.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10505g predicted mRNA Length = 4701 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tacatttatcttttctgaag 327 |||||||||||||||||||| Sbjct: 3630 tacatttatcttttctgaag 3611
>gb|AC113038.14| Mus musculus chromosome 17, clone RP23-228K17, complete sequence Length = 226769 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 attaatttcataaaaatcaa 396 |||||||||||||||||||| Sbjct: 137590 attaatttcataaaaatcaa 137571
>gb|BC054299.1| Xenopus laevis acetyl-Coenzyme A acyltransferase 1, mRNA (cDNA clone MGC:64556 IMAGE:6879896), complete cds Length = 1718 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 aatgcttcattaatttcata 388 |||||||||||||||||||| Sbjct: 1050 aatgcttcattaatttcata 1031
>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence Length = 204292 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 acatggagacacacaagcac 83 |||||||||||||||||||| Sbjct: 15019 acatggagacacacaagcac 15038
>emb|AL355173.25| Human DNA sequence from clone RP11-335P18 on chromosome 13 Contains the 3' end of the PCDH9 gene for protocadherin 9 and a novel gene, complete sequence Length = 165699 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 acatggagacacacaagcac 83 |||||||||||||||||||| Sbjct: 55716 acatggagacacacaagcac 55697
>gb|AE017157.1| Chlamydophila pneumoniae TW-183, section 1 of 4 of the complete genome Length = 300923 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gagaagcttttgatttgcaa 354 |||||||||||||||||||| Sbjct: 60688 gagaagcttttgatttgcaa 60707
>emb|AL138816.12| Human DNA sequence from clone RP11-235O20 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to heparan sulfate 6-sulfotransferase, complete sequence Length = 142420 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 acatggagacacacaagcac 83 |||||||||||||||||||| Sbjct: 105339 acatggagacacacaagcac 105320
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tacatttatcttttctgaag 327 |||||||||||||||||||| Sbjct: 925772 tacatttatcttttctgaag 925791
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 gtgaccaaaatgcgagcaccactg 269 ||||||||||||||||| |||||| Sbjct: 625719 gtgaccaaaatgcgagccccactg 625696
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gagaagcttttgatttgcaa 354 |||||||||||||||||||| Sbjct: 777999 gagaagcttttgatttgcaa 777980
>emb|BX470260.10| Zebrafish DNA sequence from clone CH211-125C23 in linkage group 14, complete sequence Length = 66554 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 acacaagcacctgaaactgc 93 |||||||||||||||||||| Sbjct: 34117 acacaagcacctgaaactgc 34098
>gb|AC155934.2| Mus musculus BAC clone RP23-58N8 from chromosome 9, complete sequence Length = 198059 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cagaggcaggctccatcttt 119 |||||||||||||||||||| Sbjct: 26453 cagaggcaggctccatcttt 26472
>gb|AC158516.2| Mus musculus BAC clone RP24-511A23 from chromosome 9, complete sequence Length = 167046 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cagaggcaggctccatcttt 119 |||||||||||||||||||| Sbjct: 163143 cagaggcaggctccatcttt 163162
>gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11-473F11, CTC-775O14 map q28, complete sequence Length = 185708 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 aagttaaccaattacttaatctgg 31 |||||||||||||| ||||||||| Sbjct: 40428 aagttaaccaattaattaatctgg 40405
>gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q28, complete sequence Length = 148527 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 aagttaaccaattacttaatctgg 31 |||||||||||||| ||||||||| Sbjct: 55049 aagttaaccaattaattaatctgg 55026
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gagaagcttttgatttgcaa 354 |||||||||||||||||||| Sbjct: 63192 gagaagcttttgatttgcaa 63211
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gagaagcttttgatttgcaa 354 |||||||||||||||||||| Sbjct: 62873 gagaagcttttgatttgcaa 62892 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,911,260 Number of Sequences: 3902068 Number of extensions: 4911260 Number of successful extensions: 93292 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93132 Number of HSP's gapped (non-prelim): 158 length of query: 407 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 385 effective length of database: 17,147,199,772 effective search space: 6601671912220 effective search space used: 6601671912220 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)