ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet70b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB219525.1| Hordeum vulgare HvPIP2;4 mRNA for PIP aquaporin ... 349 2e-93
2gb|AC116395.21| Mus musculus chromosome 14, clone RP23-106K9, co... 42 0.61
3emb|BX004993.16| Zebrafish DNA sequence from clone CH211-163C2 i... 42 0.61
4emb|BX323881.7| Zebrafish DNA sequence from clone CH211-274G13 i... 42 0.61
5gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 42 0.61
6emb|Z82265.1|CEF02H6 Caenorhabditis elegans Cosmid F02H6, comple... 40 2.4
7tpg|BK003523.1| TPA: TPA_inf: Drosophila melanogaster HDC02994 (... 40 2.4
8gb|AC092643.2| Homo sapiens BAC clone RP11-393P9 from 4, complet... 40 2.4
9gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosom... 40 2.4
10gb|AC009202.7| Drosophila melanogaster, chromosome 2L, region 36... 40 2.4
11gb|AC011662.1|AC011662 Drosophila melanogaster, chromosome 2L, r... 40 2.4
12gb|AE003656.2| Drosophila melanogaster chromosome 2L, section 65... 40 2.4
13ref|NM_100103.1| Arabidopsis thaliana ANAC003; transcription fac... 38 9.5
14gb|BT020269.1| Arabidopsis thaliana At1g02220 mRNA, complete cds 38 9.5
15gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, c... 38 9.5
16gb|AC025353.9| Mus musculus chromosome 9, clone RP23-93E19, comp... 38 9.5
17emb|CR654466.2|CNS0F3YG Tetraodon nigroviridis full-length cDNA 38 9.5
18emb|CR636053.2|CNS0EPQZ Tetraodon nigroviridis full-length cDNA 38 9.5
19emb|CR636050.2|CNS0EPQW Tetraodon nigroviridis full-length cDNA 38 9.5
20emb|CR635276.2|CNS0EP5E Tetraodon nigroviridis full-length cDNA 38 9.5
21emb|AL590556.20| Human DNA sequence from clone RP11-26H16 on chr... 38 9.5
22ref|XM_503961.1| Yarrowia lipolytica CLIB122, YALI0E14971g predi... 38 9.5
23gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 38 9.5
24emb|AL157710.19| Human DNA sequence from clone RP11-219J23 on ch... 38 9.5
25gb|AC162905.4| Mus musculus BAC clone RP24-281B12 from chromosom... 38 9.5
26dbj|AK138470.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 38 9.5
27emb|BX001029.16| Zebrafish DNA sequence from clone CH211-273K1 i... 38 9.5
28gb|AC153905.5| Mus musculus 6 BAC RP23-215A7 (Roswell Park Cance... 38 9.5
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
30emb|BX815731.1|CNS0AAVD Arabidopsis thaliana Full-length cDNA Co... 38 9.5
31gb|BT022063.1| Arabidopsis thaliana At1g02220 gene, complete cds 38 9.5
32gb|AC009224.6| Homo sapiens BAC clone RP11-92G23 from 2, complet... 38 9.5
33gb|AC007406.1| Homo sapiens 12 BAC RPCI11-283I3 (Roswell Park Ca... 38 9.5
34gb|AC064879.3|AC064879 Arabidopsis thaliana chromosome I BAC T6A... 38 9.5
35dbj|AP006556.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
36gb|AC153603.3| Mus musculus 6 BAC RP23-315I7 (Roswell Park Cance... 38 9.5
37gb|AC006143.1|AC006143 Homo sapiens PAC clone RP1-74M20 from X, ... 38 9.5
38gb|AE015927.1| Clostridium tetani E88, complete genome 38 9.5
39gb|AF003840.1|AF003840 Hydrolagus colliei immunoglobulin heavy c... 38 9.5
40emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 38 9.5
41gb|AC156836.6| Mus musculus BAC clone RP23-88L11 from chromosome... 38 9.5
42emb|AL672219.7| Mouse DNA sequence from clone RP23-456B9 on chro... 38 9.5
43gb|U89959.1| Arabidopsis thaliana BAC T7I23, complete sequence 38 9.5 
>dbj|AB219525.1| Hordeum vulgare HvPIP2;4 mRNA for PIP aquaporin isoform, complete cds
          Length = 1343

 Score =  349 bits (176), Expect = 2e-93
 Identities = 189/192 (98%), Gaps = 1/192 (0%)
 Strand = Plus / Minus

                                                                        
Query: 2    agctcacaaaccgaaccgtacgtacacattgcatttcaaatttcccccc-aagttacctg 60
            ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1233 agctcacgaaccgaaccgtacgtacacattgcatttcaaatttcccccccaagttacctg 1174

                                                                        
Query: 61   gatgcgtacatgacatgacagtacatcatcctcatcattcataaacattacatggaagca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 gatgcgtacatgacatgacagtacatcatcctcatcattcataaacattacatggaagca 1114

                                                                        
Query: 121  aacactgactgacgaagacacactcgatcggtagagaaaacaagcagcaagcgcgggcgg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 aacactgactgacgaagacacactcgatcggtagagaaaacaagcagcaagcgcgggcgg 1054

                        
Query: 181  cgagccgaggaa 192
            ||||| ||||||
Sbjct: 1053 cgagcagaggaa 1042
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>gb|AC116395.21| Mus musculus chromosome 14, clone RP23-106K9, complete sequence
          Length = 218656

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 105    acattacatggaagcaaacac 125
              |||||||||||||||||||||
Sbjct: 152543 acattacatggaagcaaacac 152563
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>emb|BX004993.16| Zebrafish DNA sequence from clone CH211-163C2 in linkage group 7,
              complete sequence
          Length = 150136

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 78     acagtacatcatcctcatcat 98
              |||||||||||||||||||||
Sbjct: 125640 acagtacatcatcctcatcat 125660
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>emb|BX323881.7| Zebrafish DNA sequence from clone CH211-274G13 in linkage group 14,
              complete sequence
          Length = 157039

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     acagtacatcatcctcatcat 98
              |||||||||||||||||||||
Sbjct: 128445 acagtacatcatcctcatcat 128425
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 79      cagtacatcatcctcatcatt 99
               |||||||||||||||||||||
Sbjct: 3820278 cagtacatcatcctcatcatt 3820258
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>emb|Z82265.1|CEF02H6 Caenorhabditis elegans Cosmid F02H6, complete sequence
          Length = 34107

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   agtacatcatcctcatcatt 99
            ||||||||||||||||||||
Sbjct: 2425 agtacatcatcctcatcatt 2406
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>tpg|BK003523.1| TPA: TPA_inf: Drosophila melanogaster HDC02994 (HDC02994) gene,
            complete cds
          Length = 2573

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 28   cattgcatttcaaatttccc 47
            ||||||||||||||||||||
Sbjct: 1992 cattgcatttcaaatttccc 1973
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>gb|AC092643.2| Homo sapiens BAC clone RP11-393P9 from 4, complete sequence
          Length = 151902

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    aaatttccccccaagttacc 58
             ||||||||||||||||||||
Sbjct: 77542 aaatttccccccaagttacc 77561
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>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete
             sequence
          Length = 212960

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    cacattgcatttcaaatttc 45
             ||||||||||||||||||||
Sbjct: 26652 cacattgcatttcaaatttc 26633
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>gb|AC009202.7| Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone
              BACR06C11, complete sequence
          Length = 174500

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     cattgcatttcaaatttccc 47
              ||||||||||||||||||||
Sbjct: 148936 cattgcatttcaaatttccc 148917
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>gb|AC011662.1|AC011662 Drosophila melanogaster, chromosome 2L, region 36D-, BAC clones
             BACR01G10 and BACR05I08, complete sequence
          Length = 294942

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    cattgcatttcaaatttccc 47
             ||||||||||||||||||||
Sbjct: 16921 cattgcatttcaaatttccc 16902
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>gb|AE003656.2| Drosophila melanogaster chromosome 2L, section 65 of 83 of the complete
              sequence
          Length = 251192

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     cattgcatttcaaatttccc 47
              ||||||||||||||||||||
Sbjct: 179433 cattgcatttcaaatttccc 179414
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>ref|NM_100103.1| Arabidopsis thaliana ANAC003; transcription factor AT1G02220
           (ANAC003) mRNA, complete cds
          Length = 1185

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 84  catcatcctcatcattcat 102
           |||||||||||||||||||
Sbjct: 670 catcatcctcatcattcat 652
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>gb|BT020269.1| Arabidopsis thaliana At1g02220 mRNA, complete cds
          Length = 1353

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 84  catcatcctcatcattcat 102
           |||||||||||||||||||
Sbjct: 750 catcatcctcatcattcat 732
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>gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, complete sequence
          Length = 159722

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 114   ggaagcaaacactgactga 132
             |||||||||||||||||||
Sbjct: 51779 ggaagcaaacactgactga 51761
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>gb|AC025353.9| Mus musculus chromosome 9, clone RP23-93E19, complete sequence
          Length = 274853

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 119    caaacactgactgacgaag 137
              |||||||||||||||||||
Sbjct: 215803 caaacactgactgacgaag 215821
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>emb|CR654466.2|CNS0F3YG Tetraodon nigroviridis full-length cDNA
          Length = 429

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 153 agagaaaacaagcagcaag 171
           |||||||||||||||||||
Sbjct: 357 agagaaaacaagcagcaag 339
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>emb|CR636053.2|CNS0EPQZ Tetraodon nigroviridis full-length cDNA
          Length = 429

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 153 agagaaaacaagcagcaag 171
           |||||||||||||||||||
Sbjct: 357 agagaaaacaagcagcaag 339
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>emb|CR636050.2|CNS0EPQW Tetraodon nigroviridis full-length cDNA
          Length = 429

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 153 agagaaaacaagcagcaag 171
           |||||||||||||||||||
Sbjct: 357 agagaaaacaagcagcaag 339
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>emb|CR635276.2|CNS0EP5E Tetraodon nigroviridis full-length cDNA
          Length = 429

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 153 agagaaaacaagcagcaag 171
           |||||||||||||||||||
Sbjct: 357 agagaaaacaagcagcaag 339
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>emb|AL590556.20| Human DNA sequence from clone RP11-26H16 on chromosome 1 Contains a
             ribosomal protein L21 (RPL21) pseudogene,  the 5' end of
             the HSPG2 gene for heparan sulfate proteoglycan 2
             (perlecan), the ELA3B gene for elastase 3B (pancreatic)
             and the ELA3A gene for elastase 3A (pancreatic (protease
             E)), complete sequence
          Length = 118495

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    catcatcctcatcattcat 102
             |||||||||||||||||||
Sbjct: 13165 catcatcctcatcattcat 13183
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>ref|XM_503961.1| Yarrowia lipolytica CLIB122, YALI0E14971g predicted mRNA
          Length = 1614

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 120  aaacactgactgacgaaga 138
            |||||||||||||||||||
Sbjct: 1544 aaacactgactgacgaaga 1562
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 167     gcaagcgcgggcggcgagc 185
               |||||||||||||||||||
Sbjct: 1699845 gcaagcgcgggcggcgagc 1699863
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>emb|AL157710.19| Human DNA sequence from clone RP11-219J23 on chromosome 10, complete
             sequence
          Length = 63017

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 152   tagagaaaacaagcagcaa 170
             |||||||||||||||||||
Sbjct: 45060 tagagaaaacaagcagcaa 45078
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>gb|AC162905.4| Mus musculus BAC clone RP24-281B12 from chromosome 9, complete sequence
          Length = 205771

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 119    caaacactgactgacgaag 137
              |||||||||||||||||||
Sbjct: 172721 caaacactgactgacgaag 172739
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>dbj|AK138470.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330026K03 product:unclassifiable, full
            insert sequence
          Length = 1975

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 119  caaacactgactgacgaag 137
            |||||||||||||||||||
Sbjct: 1088 caaacactgactgacgaag 1070
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>emb|BX001029.16| Zebrafish DNA sequence from clone CH211-273K1 in linkage group 2,
             complete sequence
          Length = 141447

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 96    cattcataaacattacatg 114
             |||||||||||||||||||
Sbjct: 66697 cattcataaacattacatg 66679
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>gb|AC153905.5| Mus musculus 6 BAC RP23-215A7 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 215955

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 114   ggaagcaaacactgactga 132
             |||||||||||||||||||
Sbjct: 53341 ggaagcaaacactgactga 53359
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 91       ctcatcattcataaacatt 109
                |||||||||||||||||||
Sbjct: 12233830 ctcatcattcataaacatt 12233812
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>emb|BX815731.1|CNS0AAVD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS89ZG04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1540

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 84  catcatcctcatcattcat 102
           |||||||||||||||||||
Sbjct: 902 catcatcctcatcattcat 884
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>gb|BT022063.1| Arabidopsis thaliana At1g02220 gene, complete cds
          Length = 1185

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 84  catcatcctcatcattcat 102
           |||||||||||||||||||
Sbjct: 670 catcatcctcatcattcat 652
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>gb|AC009224.6| Homo sapiens BAC clone RP11-92G23 from 2, complete sequence
          Length = 144784

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 23     gtacacattgcatttcaaatttc 45
              ||||||||||||||| |||||||
Sbjct: 128618 gtacacattgcattttaaatttc 128640
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>gb|AC007406.1| Homo sapiens 12 BAC RPCI11-283I3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177402

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 153    agagaaaacaagcagcaag 171
              |||||||||||||||||||
Sbjct: 146928 agagaaaacaagcagcaag 146946
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>gb|AC064879.3|AC064879 Arabidopsis thaliana chromosome I BAC T6A9 genomic sequence, complete
             sequence
          Length = 109180

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    catcatcctcatcattcat 102
             |||||||||||||||||||
Sbjct: 24672 catcatcctcatcattcat 24690
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>dbj|AP006556.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1010G04a
          Length = 61450

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    ctcatcattcataaacatt 109
             |||||||||||||||||||
Sbjct: 14493 ctcatcattcataaacatt 14475
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>gb|AC153603.3| Mus musculus 6 BAC RP23-315I7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228174

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 114    ggaagcaaacactgactga 132
              |||||||||||||||||||
Sbjct: 185142 ggaagcaaacactgactga 185160
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>gb|AC006143.1|AC006143 Homo sapiens PAC clone RP1-74M20 from X, complete sequence
          Length = 191544

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 111   catggaagcaaacactgactgac 133
             |||||||| ||||||||||||||
Sbjct: 98459 catggaagaaaacactgactgac 98437
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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 86      tcatcctcatcattcataa 104
               |||||||||||||||||||
Sbjct: 2049887 tcatcctcatcattcataa 2049905
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>gb|AF003840.1|AF003840 Hydrolagus colliei immunoglobulin heavy chain putative D
           element-containing segment, partial V, D1, D2 and J
           regions
          Length = 1375

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 76  tgacagtacatcatcctca 94
           |||||||||||||||||||
Sbjct: 622 tgacagtacatcatcctca 640
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 120     aaacactgactgacgaaga 138
               |||||||||||||||||||
Sbjct: 1788200 aaacactgactgacgaaga 1788218
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>gb|AC156836.6| Mus musculus BAC clone RP23-88L11 from chromosome 10, complete sequence
          Length = 255961

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 103    aaacattacatggaagcaa 121
              |||||||||||||||||||
Sbjct: 207490 aaacattacatggaagcaa 207472
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>emb|AL672219.7| Mouse DNA sequence from clone RP23-456B9 on chromosome 9, complete
             sequence
          Length = 206125

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 119   caaacactgactgacgaag 137
             |||||||||||||||||||
Sbjct: 95748 caaacactgactgacgaag 95730
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>gb|U89959.1| Arabidopsis thaliana BAC T7I23, complete sequence
          Length = 106973

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    catcatcctcatcattcat 102
             |||||||||||||||||||
Sbjct: 80044 catcatcctcatcattcat 80062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,732,861
Number of Sequences: 3902068
Number of extensions: 1732861
Number of successful extensions: 135902
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135690
Number of HSP's gapped (non-prelim): 211
length of query: 192
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 170
effective length of database: 17,147,199,772
effective search space: 2915023961240
effective search space used: 2915023961240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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