ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet70b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for ... 529 e-147
2gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome... 123 3e-25
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 123 3e-25
4dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 3e-25
5dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 3e-25
6dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 3e-25
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 123 3e-25
8dbj|D85512.1| Oryza sativa (japonica cultivar-group) CP26 mRNA, ... 123 3e-25
9gb|AY105650.1| Zea mays PCO135935 mRNA sequence 115 8e-23
10gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein... 115 8e-23
11gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein... 101 1e-18
12gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light h... 94 3e-16
13gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence 48 0.016
14emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP... 48 0.016
15dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, c... 46 0.062
16gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome... 42 0.96
17gb|AC092605.2| Homo sapiens BAC clone RP11-146C12 from 2, comple... 42 0.96
18gb|U25812.1|PSU25812 Pseudomonas syringae pv. syringae hrp gene ... 42 0.96
19gb|AC139637.17| Mus musculus chromosome 15, clone RP24-253M12, c... 40 3.8
20ref|NM_001039970.1| Homo sapiens protein tyrosine phosphatase, n... 40 3.8
21ref|NM_032781.3| Homo sapiens protein tyrosine phosphatase, non-... 40 3.8
22ref|NM_006906.1| Homo sapiens protein tyrosine phosphatase, non-... 40 3.8
23gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome... 40 3.8
24gb|BC046435.1| Homo sapiens protein tyrosine phosphatase, non-re... 40 3.8
25gb|BC064807.1| Homo sapiens protein tyrosine phosphatase, non-re... 40 3.8
26gb|BC039897.1| Homo sapiens protein tyrosine phosphatase, non-re... 40 3.8
27emb|AL832541.1|HSM803850 Homo sapiens mRNA; cDNA DKFZp547A0817 (... 40 3.8
28emb|AL806524.10| Mouse DNA sequence from clone RP23-158E10 on ch... 40 3.8
29dbj|AK127312.1| Homo sapiens cDNA FLJ45381 fis, clone BRHIP30210... 40 3.8
30dbj|AK090923.1| Homo sapiens cDNA FLJ33604 fis, clone BRAMY20152... 40 3.8
31dbj|AK027333.1| Homo sapiens cDNA FLJ14427 fis, clone HEMBA1006173 40 3.8
32dbj|AK055450.1| Homo sapiens cDNA FLJ30888 fis, clone FEBRA20050... 40 3.8
33gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, c... 40 3.8
34emb|BX530075.7| Zebrafish DNA sequence from clone CH211-1O14 in ... 40 3.8
35gb|BC047349.1| Mus musculus, clone IMAGE:3595895, mRNA 40 3.8
36dbj|AB060245.1| Macaca fascicularis brain cDNA clone:QflA-15249,... 40 3.8
37gb|U68715.1|BFU68715 Botryotinia fuckeliana endopolygalacturonas... 40 3.8
38gb|AD000005.1|MSGY42 Mycobacterium tuberculosis sequence from cl... 40 3.8
39emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-9... 40 3.8 
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b
            binding (CAB) protein of photosystem II (PSII)
          Length = 2689

 Score =  529 bits (267), Expect = e-147
 Identities = 282/287 (98%)
 Strand = Plus / Minus

                                                                        
Query: 5    tcagaaatcaaaacggtcatgtttcttctgcccttgataatttacacgtacggcacattc 64
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2421 tcagaaatcagaacggtcatgtttcttctgcccttgataatttacacgtacggcacattc 2362

                                                                        
Query: 65   gtactctcatacttttccccggtaaaattcacacagcacatcatgctgcatcgcacgcac 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2361 gtactctcatacttttccccggtaaaattcacacagcacatcatgctgcatcgcacgcac 2302

                                                                        
Query: 125  gcatgcagctgagcatcaacagccgacggcggcggacgggcaatcaacggccagctcaca 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2301 gcatgcagctgagcatcaacagccgacggcggcggacgggcaatcaacggccagctcaca 2242

                                                                        
Query: 185  ggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccgaaggggt 244
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2241 ggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccgaaggggt 2182

                                                           
Query: 245  cgttgaggcggccgcacaggttctcgaagggcccctcgccggtgacg 291
            || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 2181 cgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacg 2135
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>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0091I11, complete sequence
          Length = 135993

 Score =  123 bits (62), Expect = 3e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                         
Query: 182   acaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccgaagg 241
             |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 40261 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 40202

                                                               
Query: 242   ggtcgttgaggcggccgcacaggttctcgaagggcccctcgccggtgacg 291
             ||||| ||||| |   | | |||||||||| ||| |||||||||||||||
Sbjct: 40201 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacg 40152
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  123 bits (62), Expect = 3e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                           
Query: 182     acaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccgaagg 241
               |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7581175 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 7581116

                                                                 
Query: 242     ggtcgttgaggcggccgcacaggttctcgaagggcccctcgccggtgacg 291
               ||||| ||||| |   | | |||||||||| ||| |||||||||||||||
Sbjct: 7581115 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacg 7581066
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>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full
           insert sequence
          Length = 1157

 Score =  123 bits (62), Expect = 3e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                       
Query: 182 acaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccgaagg 241
           |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 940 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 881

                                                             
Query: 242 ggtcgttgaggcggccgcacaggttctcgaagggcccctcgccggtgacg 291
           ||||| ||||| |   | | |||||||||| ||| |||||||||||||||
Sbjct: 880 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacg 831
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>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full
           insert sequence
          Length = 1101

 Score =  123 bits (62), Expect = 3e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                       
Query: 182 acaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccgaagg 241
           |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 930 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 871

                                                             
Query: 242 ggtcgttgaggcggccgcacaggttctcgaagggcccctcgccggtgacg 291
           ||||| ||||| |   | | |||||||||| ||| |||||||||||||||
Sbjct: 870 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacg 821
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>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full
           insert sequence
          Length = 1186

 Score =  123 bits (62), Expect = 3e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                       
Query: 182 acaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccgaagg 241
           |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 941 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 882

                                                             
Query: 242 ggtcgttgaggcggccgcacaggttctcgaagggcccctcgccggtgacg 291
           ||||| ||||| |   | | |||||||||| ||| |||||||||||||||
Sbjct: 881 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacg 832
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  123 bits (62), Expect = 3e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                           
Query: 182     acaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccgaagg 241
               |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7651262 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 7651203

                                                                 
Query: 242     ggtcgttgaggcggccgcacaggttctcgaagggcccctcgccggtgacg 291
               ||||| ||||| |   | | |||||||||| ||| |||||||||||||||
Sbjct: 7651202 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacg 7651153
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>dbj|D85512.1| Oryza sativa (japonica cultivar-group) CP26 mRNA, partial sequence
          Length = 556

 Score =  123 bits (62), Expect = 3e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                       
Query: 182 acaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccgaagg 241
           |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 395 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 336

                                                             
Query: 242 ggtcgttgaggcggccgcacaggttctcgaagggcccctcgccggtgacg 291
           ||||| ||||| |   | | |||||||||| ||| |||||||||||||||
Sbjct: 335 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacg 286
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>gb|AY105650.1| Zea mays PCO135935 mRNA sequence
          Length = 1366

 Score =  115 bits (58), Expect = 8e-23
 Identities = 70/74 (94%)
 Strand = Plus / Minus

                                                                        
Query: 179  ctcacaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccga 238
            ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1028 ctcacaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccga 969

                          
Query: 239  aggggtcgttgagg 252
            |||||||| |||||
Sbjct: 968  aggggtcgctgagg 955
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>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA,
           complete cds
          Length = 957

 Score =  115 bits (58), Expect = 8e-23
 Identities = 70/74 (94%)
 Strand = Plus / Minus

                                                                       
Query: 179 ctcacaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccga 238
           ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 886 ctcacaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccga 827

                         
Query: 239 aggggtcgttgagg 252
           |||||||| |||||
Sbjct: 826 aggggtcgctgagg 813
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>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA,
           complete cds
          Length = 1073

 Score =  101 bits (51), Expect = 1e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                       
Query: 182 acaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccgaagg 241
           ||||||| |||  |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 881 acaggctaggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 822

                      
Query: 242 ggtcgttgagg 252
           ||||| |||||
Sbjct: 821 ggtcgctgagg 811
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>gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light harvesting protein
           mRNA, partial cds
          Length = 364

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                       
Query: 182 acaggctgggcaccctctcggcggcgccggaaatgacggtgagcaggttgttgccgaagg 241
           ||||||||||  ||||||||||||| || || ||||||||||||||||||||||||||||
Sbjct: 193 acaggctgggtgccctctcggcggcaccagagatgacggtgagcaggttgttgccgaagg 134

                      
Query: 242 ggtcgttgagg 252
           ||||| |||||
Sbjct: 133 ggtcgctgagg 123



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 37  cttgataatttacacgtacggcacattcgtactctcat 74
           |||||||||||||||| |||| ||||||  ||||||||
Sbjct: 319 cttgataatttacacgcacggtacattcagactctcat 282
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>gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence
          Length = 1196

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 214 atgacggtgagcaggttgttgccgaaggggtc 245
           ||||||||||||| ||||||||| ||||||||
Sbjct: 906 atgacggtgagcaagttgttgccaaaggggtc 875
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>emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP29 polypeptide
          Length = 2327

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 214  atgacggtgagcaggttgttgccgaaggggtc 245
            ||||||||||||| ||||||||| ||||||||
Sbjct: 1938 atgacggtgagcaagttgttgccaaaggggtc 1907
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>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds
          Length = 952

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 216 gacggtgagcaggttgttgccgaaggggtcg 246
           |||||| |||||||||| |||||||||||||
Sbjct: 883 gacggtcagcaggttgtagccgaaggggtcg 853
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>gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome 18, complete sequence
          Length = 167532

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 89    aaattcacacagcacatcatg 109
             |||||||||||||||||||||
Sbjct: 74556 aaattcacacagcacatcatg 74536
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>gb|AC092605.2| Homo sapiens BAC clone RP11-146C12 from 2, complete sequence
          Length = 71380

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 2    ttttcagaaatcaaaacggtcatgtttct 30
            |||| |||||||||||| |||||||||||
Sbjct: 7955 ttttgagaaatcaaaactgtcatgtttct 7983
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>gb|U25812.1|PSU25812 Pseudomonas syringae pv. syringae hrp gene cluster, hrpU, hrpW,
           hrpO, hrpX, and hrpY genes, complete cds, and hrpU2,
           partial cds
          Length = 3672

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 217 acggtgagcaggttgttgccgaagg 241
           ||||||||||||| |||||||||||
Sbjct: 488 acggtgagcaggtggttgccgaagg 512
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>gb|AC139637.17| Mus musculus chromosome 15, clone RP24-253M12, complete sequence
          Length = 136076

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   caggctgggcaccctctcgg 202
             ||||||||||||||||||||
Sbjct: 97871 caggctgggcaccctctcgg 97852
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>ref|NM_001039970.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched) (PTPN5), transcript variant 3, mRNA
          Length = 3105

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 2657 ctcacaggctgggcaccctc 2638
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>ref|NM_032781.3| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched) (PTPN5), transcript variant 2, mRNA
          Length = 3156

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 2708 ctcacaggctgggcaccctc 2689
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>ref|NM_006906.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched) (PTPN5), transcript variant 1, mRNA
          Length = 3201

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 2753 ctcacaggctgggcaccctc 2734
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>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence
          Length = 172879

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    caggctgggcaccctctcgg 202
              ||||||||||||||||||||
Sbjct: 152256 caggctgggcaccctctcgg 152275
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>gb|BC046435.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched), mRNA (cDNA clone IMAGE:5198635),
            partial cds
          Length = 1680

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 1232 ctcacaggctgggcaccctc 1213
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>gb|BC064807.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched), transcript variant 1, mRNA (cDNA
            clone MGC:65158 IMAGE:5726473), complete cds
          Length = 2947

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 2517 ctcacaggctgggcaccctc 2498
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>gb|BC039897.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched), mRNA (cDNA clone IMAGE:5196107),
            partial cds
          Length = 2860

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 2416 ctcacaggctgggcaccctc 2397
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>emb|AL832541.1|HSM803850 Homo sapiens mRNA; cDNA DKFZp547A0817 (from clone DKFZp547A0817)
          Length = 3149

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 2751 ctcacaggctgggcaccctc 2732
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>emb|AL806524.10| Mouse DNA sequence from clone RP23-158E10 on chromosome 4, complete
             sequence
          Length = 211513

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    tcacacagcacatcatgctg 112
             ||||||||||||||||||||
Sbjct: 62126 tcacacagcacatcatgctg 62107
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>dbj|AK127312.1| Homo sapiens cDNA FLJ45381 fis, clone BRHIP3021019, highly  similar
            to Protein-tyrosine phosphatase, non-receptor type 5 (EC
            3.1.3.48)
          Length = 3871

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 3491 ctcacaggctgggcaccctc 3472
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>dbj|AK090923.1| Homo sapiens cDNA FLJ33604 fis, clone BRAMY2015251, highly similar to
            PROTEIN-TYROSINE PHOSPHATASE STRIATUM-ENRICHED (EC
            3.1.3.48)
          Length = 2965

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 2617 ctcacaggctgggcaccctc 2598
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>dbj|AK027333.1| Homo sapiens cDNA FLJ14427 fis, clone HEMBA1006173
          Length = 1074

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 179 ctcacaggctgggcaccctc 198
           ||||||||||||||||||||
Sbjct: 694 ctcacaggctgggcaccctc 675
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>dbj|AK055450.1| Homo sapiens cDNA FLJ30888 fis, clone FEBRA2005079, highly similar to
            PROTEIN-TYROSINE PHOSPHATASE STRIATUM-ENRICHED (EC
            3.1.3.48)
          Length = 2299

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 1919 ctcacaggctgggcaccctc 1900
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>gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, complete sequence
          Length = 189230

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    ctcacaggctgggcaccctc 198
              ||||||||||||||||||||
Sbjct: 153760 ctcacaggctgggcaccctc 153741
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>emb|BX530075.7| Zebrafish DNA sequence from clone CH211-1O14 in linkage group 5, complete
              sequence
          Length = 176078

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    cgcacgcacgcatgcagctg 135
              ||||||||||||||||||||
Sbjct: 134568 cgcacgcacgcatgcagctg 134587
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>gb|BC047349.1| Mus musculus, clone IMAGE:3595895, mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 1232 ctcacaggctgggcaccctc 1213
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>dbj|AB060245.1| Macaca fascicularis brain cDNA clone:QflA-15249, full insert sequence
          Length = 2837

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcacaggctgggcaccctc 198
            ||||||||||||||||||||
Sbjct: 2441 ctcacaggctgggcaccctc 2422
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>gb|U68715.1|BFU68715 Botryotinia fuckeliana endopolygalacturonase 1 (BcPGA1) gene,
           complete cds
          Length = 2291

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 gcatcaacagccgacggcgg 156
           ||||||||||||||||||||
Sbjct: 669 gcatcaacagccgacggcgg 688
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>gb|AD000005.1|MSGY42 Mycobacterium tuberculosis sequence from clone y42
          Length = 36526

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ctcggcggcgccggaaatga 217
             ||||||||||||||||||||
Sbjct: 15459 ctcggcggcgccggaaatga 15440
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>emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-991C1 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177792

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    gcacgcatgcagctgagcat 140
              ||||||||||||||||||||
Sbjct: 109052 gcacgcatgcagctgagcat 109033


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,310,619
Number of Sequences: 3902068
Number of extensions: 2310619
Number of successful extensions: 42247
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42140
Number of HSP's gapped (non-prelim): 100
length of query: 291
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 269
effective length of database: 17,147,199,772
effective search space: 4612596738668
effective search space used: 4612596738668
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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